| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158336919
Identifier: 158336919
GI number: 158336919
Start: 3844849
End: 3845760
Strand: Direct
Name: 158336919
Synonym: AM1_3791
Alternate gene names: NA
Gene position: 3844849-3845760 (Clockwise)
Preceding gene: 158336918
Following gene: 158336922
Centisome position: 59.12
GC content: 51.1
Gene sequence:
>912_bases ATGACAGTAGAACACAAACGCTTTACTGCACCTTTGTGGGGAACGGTAGTCGGAGCTGTGCTCTTGGCTAGCTGCTCAAC GCCAATGACTGAGACCGTTTCGGAGTCGGGTGAAGCACCCCAAGCGGCCCAGTCAGAGTTAGCTGACCTCAGTAATAATG TGTCTGCACCTGCGGATGCTGCTCCACCGAAAGCTGAGCCGCAACTGATTAAGCGGGCCAATATGACCCTACGGGTTGAA AAAGTAGCCCCGGCCCTCAAGGCAGTCGCCAAAATTGTCAAAACACAACAAGGTGATGTGGTGGGCCTGCAGGATCAAGT GCCTCCAGATGAGTCAGTGCGTCATCAGGCATCTATGGAATTGCGCATCCCCCAGACTAAATTAGAGGCCACCCTGGAGC AGTTAGCCCAGATTGGCAAGGTACAGAACCGTTCGATTGAAGCGGAAGATGTGTCTACTCAACTGGTAGATTTTCAAGCC CGGCTCAAAAATCTTCGCAAGTCAGAAGAAGTGGTGTTGAAGATTATGGATCGATCTGGCTCTGTGGCGGATGTTCTCAA AGTTTCGCAAGAGCTGAAAACAATTCGCCAACAGATTGAACAAATCGATGCTCAGGTGAAACGGTTACAGGCACAAGTCG CCTATTCAACAGTGAATCTCAGTTTGGAATCTGCGATCGCAACTACGCCACCCCAAGCTTCCCTCGGCGAACGCCTCCAA GAAGCTTGGTCCCAGTCTACCCATGCGGTAGTCAATCTCACCTTTGGCATCCTGGGGTTTCTGGTGTGGGTTGTGGTCTT TTTGCCTTACATTCTTGGCCTAGTCTTGGTGCAATTTGTGGTTAAACGGTTGATACAGCGCCGGAGTAACGGAACCGTGA CAGCCGCCAATAACGAGTCCATTAGTGGGTAA
Upstream 100 bases:
>100_bases TCCTTCTAGGGATGTTAGGGGGTGTTGCATAAATGGTAACTCACCCAATAGCGAGGTTGAAACCCACCATAATCAGGGCA ATGTAACATTTGTCAGGGTT
Downstream 100 bases:
>100_bases GGGAGGCAATGGATTTAGGAACAGCGGCCGTGAGAACCTCATGACCTGTTTCTGTGAGCAGCACATCATCCTCAATGCGA ATCCCAATTCCTCGCCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Anti-Sigma Factor; Coiled-Coil Protein
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTVEHKRFTAPLWGTVVGAVLLASCSTPMTETVSESGEAPQAAQSELADLSNNVSAPADAAPPKAEPQLIKRANMTLRVE KVAPALKAVAKIVKTQQGDVVGLQDQVPPDESVRHQASMELRIPQTKLEATLEQLAQIGKVQNRSIEAEDVSTQLVDFQA RLKNLRKSEEVVLKIMDRSGSVADVLKVSQELKTIRQQIEQIDAQVKRLQAQVAYSTVNLSLESAIATTPPQASLGERLQ EAWSQSTHAVVNLTFGILGFLVWVVVFLPYILGLVLVQFVVKRLIQRRSNGTVTAANNESISG
Sequences:
>Translated_303_residues MTVEHKRFTAPLWGTVVGAVLLASCSTPMTETVSESGEAPQAAQSELADLSNNVSAPADAAPPKAEPQLIKRANMTLRVE KVAPALKAVAKIVKTQQGDVVGLQDQVPPDESVRHQASMELRIPQTKLEATLEQLAQIGKVQNRSIEAEDVSTQLVDFQA RLKNLRKSEEVVLKIMDRSGSVADVLKVSQELKTIRQQIEQIDAQVKRLQAQVAYSTVNLSLESAIATTPPQASLGERLQ EAWSQSTHAVVNLTFGILGFLVWVVVFLPYILGLVLVQFVVKRLIQRRSNGTVTAANNESISG >Mature_302_residues TVEHKRFTAPLWGTVVGAVLLASCSTPMTETVSESGEAPQAAQSELADLSNNVSAPADAAPPKAEPQLIKRANMTLRVEK VAPALKAVAKIVKTQQGDVVGLQDQVPPDESVRHQASMELRIPQTKLEATLEQLAQIGKVQNRSIEAEDVSTQLVDFQAR LKNLRKSEEVVLKIMDRSGSVADVLKVSQELKTIRQQIEQIDAQVKRLQAQVAYSTVNLSLESAIATTPPQASLGERLQE AWSQSTHAVVNLTFGILGFLVWVVVFLPYILGLVLVQFVVKRLIQRRSNGTVTAANNESISG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32917; Mature: 32786
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVEHKRFTAPLWGTVVGAVLLASCSTPMTETVSESGEAPQAAQSELADLSNNVSAPADA CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC APPKAEPQLIKRANMTLRVEKVAPALKAVAKIVKTQQGDVVGLQDQVPPDESVRHQASME CCCCCCHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHCE LRIPQTKLEATLEQLAQIGKVQNRSIEAEDVSTQLVDFQARLKNLRKSEEVVLKIMDRSG EECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SVADVLKVSQELKTIRQQIEQIDAQVKRLQAQVAYSTVNLSLESAIATTPPQASLGERLQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH EAWSQSTHAVVNLTFGILGFLVWVVVFLPYILGLVLVQFVVKRLIQRRSNGTVTAANNES HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC ISG CCC >Mature Secondary Structure TVEHKRFTAPLWGTVVGAVLLASCSTPMTETVSESGEAPQAAQSELADLSNNVSAPADA CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC APPKAEPQLIKRANMTLRVEKVAPALKAVAKIVKTQQGDVVGLQDQVPPDESVRHQASME CCCCCCHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHCE LRIPQTKLEATLEQLAQIGKVQNRSIEAEDVSTQLVDFQARLKNLRKSEEVVLKIMDRSG EECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SVADVLKVSQELKTIRQQIEQIDAQVKRLQAQVAYSTVNLSLESAIATTPPQASLGERLQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH EAWSQSTHAVVNLTFGILGFLVWVVVFLPYILGLVLVQFVVKRLIQRRSNGTVTAANNES HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC ISG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA