| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158336901
Identifier: 158336901
GI number: 158336901
Start: 3827213
End: 3827746
Strand: Reverse
Name: 158336901
Synonym: AM1_3772
Alternate gene names: NA
Gene position: 3827746-3827213 (Counterclockwise)
Preceding gene: 158336902
Following gene: 158336898
Centisome position: 58.85
GC content: 51.5
Gene sequence:
>534_bases ATGCTCAACCGCCTCGTACAGTGGACTCAACAACAAGGACCGCTACGAGATCAGATTTTGGCTGACCCCTATTATCGGTT TCAGTCCCTAGCAGAAGTTGCCTTAGCCGCTGAGTTGGGCGTGAGAATTGATGTGAATCAAGCCAGTGTCGATGATTGGC TGCGCCTGCCGGGCCTATCCATTCATCAGGCCCGACAGCTCGTGCAATTAACCCAGAACGGCGTCCAATTTTACGCCATT GAAGATGTGGCTGCTGCCTTATCCCAGCCCGTCCAGCGGATGCAGCCGTTAGCAGCAGTGATGCAGTTTTGCTACTACGA CCAGGAGAGCATTGCCCTAGCCCCCGCTTTCAACCTCAATGCGGCGTCCGTAGAACAGCTGATGACGATACCCGAGATGA TACCGAGTTTGGCACGAAACATTATCCGCGATCGCATTGCCCACGGTCCCTATCAACACATAGCAGATTTGCAACGACGT TTAAAATTATCGGGAGAAACAACGCAACAATTATTGCCTTATTTGAGATGCTAG
Upstream 100 bases:
>100_bases GCCAGCTCGAAAGCCTCCGCCAAGAGGGATTAGTGACCGACTACGAATTTGAACAACAGCGACGACAGCTCTTAGGTTAG TGCACCTAAATTAATTAGCC
Downstream 100 bases:
>100_bases GAACGCTCTAAAGCGGAATATCCGTTAAGCATATCGACCGATAACCAATAGCTTTGGCTTCTCAGTTTTGGTGCTCCGAA CCGTTTAAAGCGCAAATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MLNRLVQWTQQQGPLRDQILADPYYRFQSLAEVALAAELGVRIDVNQASVDDWLRLPGLSIHQARQLVQLTQNGVQFYAI EDVAAALSQPVQRMQPLAAVMQFCYYDQESIALAPAFNLNAASVEQLMTIPEMIPSLARNIIRDRIAHGPYQHIADLQRR LKLSGETTQQLLPYLRC
Sequences:
>Translated_177_residues MLNRLVQWTQQQGPLRDQILADPYYRFQSLAEVALAAELGVRIDVNQASVDDWLRLPGLSIHQARQLVQLTQNGVQFYAI EDVAAALSQPVQRMQPLAAVMQFCYYDQESIALAPAFNLNAASVEQLMTIPEMIPSLARNIIRDRIAHGPYQHIADLQRR LKLSGETTQQLLPYLRC >Mature_177_residues MLNRLVQWTQQQGPLRDQILADPYYRFQSLAEVALAAELGVRIDVNQASVDDWLRLPGLSIHQARQLVQLTQNGVQFYAI EDVAAALSQPVQRMQPLAAVMQFCYYDQESIALAPAFNLNAASVEQLMTIPEMIPSLARNIIRDRIAHGPYQHIADLQRR LKLSGETTQQLLPYLRC
Specific function: Unknown
COG id: COG1555
COG function: function code L; DNA uptake protein and related DNA-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20056; Mature: 20056
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRLVQWTQQQGPLRDQILADPYYRFQSLAEVALAAELGVRIDVNQASVDDWLRLPGLS CCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHCCCCC IHQARQLVQLTQNGVQFYAIEDVAAALSQPVQRMQPLAAVMQFCYYDQESIALAPAFNLN HHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC AASVEQLMTIPEMIPSLARNIIRDRIAHGPYQHIADLQRRLKLSGETTQQLLPYLRC HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure MLNRLVQWTQQQGPLRDQILADPYYRFQSLAEVALAAELGVRIDVNQASVDDWLRLPGLS CCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHCCCCC IHQARQLVQLTQNGVQFYAIEDVAAALSQPVQRMQPLAAVMQFCYYDQESIALAPAFNLN HHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC AASVEQLMTIPEMIPSLARNIIRDRIAHGPYQHIADLQRRLKLSGETTQQLLPYLRC HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA