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The map label for this gene is tsr [C]

Identifier: 158336872

GI number: 158336872

Start: 3796547

End: 3798937

Strand: Reverse

Name: tsr [C]

Synonym: AM1_3740

Alternate gene names: 158336872

Gene position: 3798937-3796547 (Counterclockwise)

Preceding gene: 158336873

Following gene: 158336871

Centisome position: 58.41

GC content: 50.73

Gene sequence:

>2391_bases
ATGACCCTAGCAGACGCCACGGCCAGCAACGGCAACATGGCGGCCCAAGATCTCAACGTTGACCCAGCCACCCCCTACAC
CAAACCGGCTGCCACCCTGCGCCAAAAACTATTAACCACCGTTTTGCCCGTAGCCTTGGCCCCGGTGGCCATTGCCAGTG
TGATCGGTTACGTGCAAACAGAAGCCCAGCTCAAGGAAAAAGCCCTGTTGCAGTTGGAAGAGGTGAGCTTGCTGTCTAGT
GAAGCCAGCGCCATTTTCTTAAAAGACGCCCTGAAATTTCCAGACATTATTGATAGTGACCCATTATTACTAGAAGCGGT
CCAAGCTGGCGCCCAACAAGCTGAGGCCCAAGGCTTGCCCCAGAAGCCTATTGAAGTAGTGGAACAGCAGTTTGCGAGTA
CCAAACTGCTAAAACCCAACGCTAAATTGAATGAGTACCTACAACGCGTCGTCAAAAATGGTCAGTTGGCTGAGGTGTTC
GTCACGGACAAATATGGATTTAACGTGGGCTATAGCAATCCCACCTCCGACTTTGTCCAGAATGATGAACGCTGGTGGCA
AATGGCCAAAGAGAAAGGGCAATTTATCGAAGAACCGGAGTTCGATGAATCAGCCAATCAAAACATCATTGCCCTTTCCA
AACAAGTTAAAGATGATGCGGGTAATTTCATTGGGGTGACGAAAGTTGCAATACCAACGAAAGCGTTAGACGAAGCCATC
AGTACCCTGGTGTCTCCCAACCTAACCGAGTCAGAAATTGTCCAAATTGTGAATCCCAAACTAGAGACCAACGCAGTAGT
AGATACCATTACGGCTAAAGGAAGTGATCTCCAAAATCAAGAGGTGACAGGTGGGGCAGATGTGGTAGCAGCTGCCAAAC
TCATCGAAGATTATCTGGAAGCAGAAGCAGGTGATTTGAATGCCACAAAGGCTCAGATTCGAAATATTCCCGGCATTACT
GACCTGAAGACCAAAGAACAGGTAGCAGGAGAATTCAAGTTAGTGATTGCCTCCTTTACCTACAAGGATCGATTCTTTAA
CGTGTCCATTATTCCAGGGACAAAACTGGTGGCGATTGCCTCCGTGGAAACGGCAGAAGAAGCCGCTTTGGCGCAACAGC
AGTTGATTCTGTTCGGGGGTATGGGTCTATTACTGGCAGGTTTTATTACCGCCGTGATTTACTGGCTAGCCGGGACCGTT
TCCAATCCCCTCGCCAAACTGACGGATACTGCTGACGAAGCCGCTAGCGGTAACTTGGATGTCGAAGCGGAAGTGGACGG
CACCCGCGAAACCCGAGCCCTAGCTCGCACCTTTAACACCATGGTGTCTGAGGTGAAAACTCTACTCGACAAAACGGAAC
AAACCGCCGAAGAGCAAAGAGAATCCCGCGACAAACTGGAAATGGAAATTTACCAGCTCCTCGATGAAGTGGGAGAAGCG
GTGGATGGCGACTTAACCGTCCGCGCCAGCTTAAACTCGATGGAAATGAGTACCGTTGCGGACTTGTTCAACGCCATTAT
CGATAACCTCAATGAGATTGCGGCCCAAGTAAAAGACTCTTCGGTCAAGGTGAGTTCGTCTCTGAACGAGAGCAAAGGGG
AAATGCAGACCCTTGCTGAACAAGCTATCCAAGAAACCGAGCAAACCCGTTCCACGCTGGACTCCATTGAGCAAATGTCC
ACCTCCATTGAGGATGTAGCCAGCAACGCTGGTAAAGCCGCGCTGATTTCTGACCAAGCCTACACCACGGTTCAAGAAGG
AAGTGATGCCATGGATCAAACGGTGGATAGTATTCTCAGTCTGCGAAATACGGTGGGTGAAACGGCTAAGAAAATTAAGC
GTTTGGGTGAATCCTCCCAAAAGATTTCCCAGGTGGTGTCTTTGATTGAAGAAATCGCGCTGAAAACGAATCTCCTAGCC
ATTAACGCCAGTGTAGAGGCCAGCCGGGCCGGTGAGCAGGGGCAAGGTTTCACCGTGGTTGCGGAACAGGTGGGTGCTCT
GGCGGAACAGTCCGCTGCTGCGACCAAGGAAATTGCCCAAATTGTGGCTGGTATTCAAGCCGAGACCAAAGAAGTAACCG
AAGCCATGGAAATCGGCACCAACCAGGTGGTCGATAGTACCCGCCTAGTGGAAACGACCAAAGACAAGCTGGCGGTTGTT
CTCAACCGTTCGCAAGAAATTAACGACCTGATGCGTTCGATTTCTGACGCCACCGTATCCCAAACCGAAACCTCCAAAGT
GGTGACGACCCTTATGCAGCAAATGGCAGCCCAATCTGAACAACGAGCGGAATCCTCCACCCAGGTGGCCGAATCCATGC
AGGAAACAGCAGCCGTGGCCGAGCAGATGGAAGCAGCCGTGGCCCAGTTTAAGGTCGAAGAAGCAAGCTAA

Upstream 100 bases:

>100_bases
TCCGACCTAACCTGCAACAGCATACCCGTCAACGTCCAGTTGGCAGCTTTCTTTACTCCTTAGTTACTTTCACCACAAGA
CCATGACGACCCAACAGGAC

Downstream 100 bases:

>100_bases
AACCTTCGAGCGCTTGCCTTTCGAGCCCTCTGGATTGAGATACAGGATGCCCCTCATCGACATTAGCGACCTATCATCGC
CTCAGCACTATGGATAAAGA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 796; Mature: 795

Protein sequence:

>796_residues
MTLADATASNGNMAAQDLNVDPATPYTKPAATLRQKLLTTVLPVALAPVAIASVIGYVQTEAQLKEKALLQLEEVSLLSS
EASAIFLKDALKFPDIIDSDPLLLEAVQAGAQQAEAQGLPQKPIEVVEQQFASTKLLKPNAKLNEYLQRVVKNGQLAEVF
VTDKYGFNVGYSNPTSDFVQNDERWWQMAKEKGQFIEEPEFDESANQNIIALSKQVKDDAGNFIGVTKVAIPTKALDEAI
STLVSPNLTESEIVQIVNPKLETNAVVDTITAKGSDLQNQEVTGGADVVAAAKLIEDYLEAEAGDLNATKAQIRNIPGIT
DLKTKEQVAGEFKLVIASFTYKDRFFNVSIIPGTKLVAIASVETAEEAALAQQQLILFGGMGLLLAGFITAVIYWLAGTV
SNPLAKLTDTADEAASGNLDVEAEVDGTRETRALARTFNTMVSEVKTLLDKTEQTAEEQRESRDKLEMEIYQLLDEVGEA
VDGDLTVRASLNSMEMSTVADLFNAIIDNLNEIAAQVKDSSVKVSSSLNESKGEMQTLAEQAIQETEQTRSTLDSIEQMS
TSIEDVASNAGKAALISDQAYTTVQEGSDAMDQTVDSILSLRNTVGETAKKIKRLGESSQKISQVVSLIEEIALKTNLLA
INASVEASRAGEQGQGFTVVAEQVGALAEQSAAATKEIAQIVAGIQAETKEVTEAMEIGTNQVVDSTRLVETTKDKLAVV
LNRSQEINDLMRSISDATVSQTETSKVVTTLMQQMAAQSEQRAESSTQVAESMQETAAVAEQMEAAVAQFKVEEAS

Sequences:

>Translated_796_residues
MTLADATASNGNMAAQDLNVDPATPYTKPAATLRQKLLTTVLPVALAPVAIASVIGYVQTEAQLKEKALLQLEEVSLLSS
EASAIFLKDALKFPDIIDSDPLLLEAVQAGAQQAEAQGLPQKPIEVVEQQFASTKLLKPNAKLNEYLQRVVKNGQLAEVF
VTDKYGFNVGYSNPTSDFVQNDERWWQMAKEKGQFIEEPEFDESANQNIIALSKQVKDDAGNFIGVTKVAIPTKALDEAI
STLVSPNLTESEIVQIVNPKLETNAVVDTITAKGSDLQNQEVTGGADVVAAAKLIEDYLEAEAGDLNATKAQIRNIPGIT
DLKTKEQVAGEFKLVIASFTYKDRFFNVSIIPGTKLVAIASVETAEEAALAQQQLILFGGMGLLLAGFITAVIYWLAGTV
SNPLAKLTDTADEAASGNLDVEAEVDGTRETRALARTFNTMVSEVKTLLDKTEQTAEEQRESRDKLEMEIYQLLDEVGEA
VDGDLTVRASLNSMEMSTVADLFNAIIDNLNEIAAQVKDSSVKVSSSLNESKGEMQTLAEQAIQETEQTRSTLDSIEQMS
TSIEDVASNAGKAALISDQAYTTVQEGSDAMDQTVDSILSLRNTVGETAKKIKRLGESSQKISQVVSLIEEIALKTNLLA
INASVEASRAGEQGQGFTVVAEQVGALAEQSAAATKEIAQIVAGIQAETKEVTEAMEIGTNQVVDSTRLVETTKDKLAVV
LNRSQEINDLMRSISDATVSQTETSKVVTTLMQQMAAQSEQRAESSTQVAESMQETAAVAEQMEAAVAQFKVEEAS
>Mature_795_residues
TLADATASNGNMAAQDLNVDPATPYTKPAATLRQKLLTTVLPVALAPVAIASVIGYVQTEAQLKEKALLQLEEVSLLSSE
ASAIFLKDALKFPDIIDSDPLLLEAVQAGAQQAEAQGLPQKPIEVVEQQFASTKLLKPNAKLNEYLQRVVKNGQLAEVFV
TDKYGFNVGYSNPTSDFVQNDERWWQMAKEKGQFIEEPEFDESANQNIIALSKQVKDDAGNFIGVTKVAIPTKALDEAIS
TLVSPNLTESEIVQIVNPKLETNAVVDTITAKGSDLQNQEVTGGADVVAAAKLIEDYLEAEAGDLNATKAQIRNIPGITD
LKTKEQVAGEFKLVIASFTYKDRFFNVSIIPGTKLVAIASVETAEEAALAQQQLILFGGMGLLLAGFITAVIYWLAGTVS
NPLAKLTDTADEAASGNLDVEAEVDGTRETRALARTFNTMVSEVKTLLDKTEQTAEEQRESRDKLEMEIYQLLDEVGEAV
DGDLTVRASLNSMEMSTVADLFNAIIDNLNEIAAQVKDSSVKVSSSLNESKGEMQTLAEQAIQETEQTRSTLDSIEQMST
SIEDVASNAGKAALISDQAYTTVQEGSDAMDQTVDSILSLRNTVGETAKKIKRLGESSQKISQVVSLIEEIALKTNLLAI
NASVEASRAGEQGQGFTVVAEQVGALAEQSAAATKEIAQIVAGIQAETKEVTEAMEIGTNQVVDSTRLVETTKDKLAVVL
NRSQEINDLMRSISDATVSQTETSKVVTTLMQQMAAQSEQRAESSTQVAESMQETAAVAEQMEAAVAQFKVEEAS

Specific function: Receptor For The Attractant L-Serine And Related Amino Acids. Is Also Responsible For Chemotaxis Away From A Wide Range Of Repellents, Including Leucine, Indole, And Weak Acids. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of At

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=451, Percent_Identity=27.2727272727273, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI2367378, Length=324, Percent_Identity=26.5432098765432, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1788195, Length=282, Percent_Identity=27.3049645390071, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1788194, Length=243, Percent_Identity=32.0987654320988, Blast_Score=96, Evalue=1e-20,
Organism=Escherichia coli, GI1789453, Length=282, Percent_Identity=31.9148936170213, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003018
- InterPro:   IPR003660
- InterPro:   IPR016132 [H]

Pfam domain/function: PF01590 GAF; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 85467; Mature: 85336

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLADATASNGNMAAQDLNVDPATPYTKPAATLRQKLLTTVLPVALAPVAIASVIGYVQT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAQLKEKALLQLEEVSLLSSEASAIFLKDALKFPDIIDSDPLLLEAVQAGAQQAEAQGLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
QKPIEVVEQQFASTKLLKPNAKLNEYLQRVVKNGQLAEVFVTDKYGFNVGYSNPTSDFVQ
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHC
NDERWWQMAKEKGQFIEEPEFDESANQNIIALSKQVKDDAGNFIGVTKVAIPTKALDEAI
CHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHCCCCEEEEHHHHCCHHHHHHHH
STLVSPNLTESEIVQIVNPKLETNAVVDTITAKGSDLQNQEVTGGADVVAAAKLIEDYLE
HHHHCCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
AEAGDLNATKAQIRNIPGITDLKTKEQVAGEFKLVIASFTYKDRFFNVSIIPGTKLVAIA
CCCCCCCHHHHHHHCCCCCCCCCHHHHHCCHHEEEEEEEEECCCEEEEEECCCCCEEEEE
SVETAEEAALAQQQLILFGGMGLLLAGFITAVIYWLAGTVSNPLAKLTDTADEAASGNLD
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHCCCCCC
VEAEVDGTRETRALARTFNTMVSEVKTLLDKTEQTAEEQRESRDKLEMEIYQLLDEVGEA
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDGDLTVRASLNSMEMSTVADLFNAIIDNLNEIAAQVKDSSVKVSSSLNESKGEMQTLAE
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCHHHHHHHHH
QAIQETEQTRSTLDSIEQMSTSIEDVASNAGKAALISDQAYTTVQEGSDAMDQTVDSILS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCHHHHHHHHHHHH
LRNTVGETAKKIKRLGESSQKISQVVSLIEEIALKTNLLAINASVEASRAGEQGQGFTVV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHCCCCCCCCHHHH
AEQVGALAEQSAAATKEIAQIVAGIQAETKEVTEAMEIGTNQVVDSTRLVETTKDKLAVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LNRSQEINDLMRSISDATVSQTETSKVVTTLMQQMAAQSEQRAESSTQVAESMQETAAVA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQMEAAVAQFKVEEAS
HHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TLADATASNGNMAAQDLNVDPATPYTKPAATLRQKLLTTVLPVALAPVAIASVIGYVQT
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAQLKEKALLQLEEVSLLSSEASAIFLKDALKFPDIIDSDPLLLEAVQAGAQQAEAQGLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
QKPIEVVEQQFASTKLLKPNAKLNEYLQRVVKNGQLAEVFVTDKYGFNVGYSNPTSDFVQ
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHC
NDERWWQMAKEKGQFIEEPEFDESANQNIIALSKQVKDDAGNFIGVTKVAIPTKALDEAI
CHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHCCCCEEEEHHHHCCHHHHHHHH
STLVSPNLTESEIVQIVNPKLETNAVVDTITAKGSDLQNQEVTGGADVVAAAKLIEDYLE
HHHHCCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
AEAGDLNATKAQIRNIPGITDLKTKEQVAGEFKLVIASFTYKDRFFNVSIIPGTKLVAIA
CCCCCCCHHHHHHHCCCCCCCCCHHHHHCCHHEEEEEEEEECCCEEEEEECCCCCEEEEE
SVETAEEAALAQQQLILFGGMGLLLAGFITAVIYWLAGTVSNPLAKLTDTADEAASGNLD
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHCCCCCC
VEAEVDGTRETRALARTFNTMVSEVKTLLDKTEQTAEEQRESRDKLEMEIYQLLDEVGEA
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDGDLTVRASLNSMEMSTVADLFNAIIDNLNEIAAQVKDSSVKVSSSLNESKGEMQTLAE
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCHHHHHHHHH
QAIQETEQTRSTLDSIEQMSTSIEDVASNAGKAALISDQAYTTVQEGSDAMDQTVDSILS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCHHHHHHHHHHHH
LRNTVGETAKKIKRLGESSQKISQVVSLIEEIALKTNLLAINASVEASRAGEQGQGFTVV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHCCCCCCCCHHHH
AEQVGALAEQSAAATKEIAQIVAGIQAETKEVTEAMEIGTNQVVDSTRLVETTKDKLAVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LNRSQEINDLMRSISDATVSQTETSKVVTTLMQQMAAQSEQRAESSTQVAESMQETAAVA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQMEAAVAQFKVEEAS
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]