| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158336792
Identifier: 158336792
GI number: 158336792
Start: 3717059
End: 3717664
Strand: Reverse
Name: 158336792
Synonym: AM1_3660
Alternate gene names: NA
Gene position: 3717664-3717059 (Counterclockwise)
Preceding gene: 158336793
Following gene: 158336791
Centisome position: 57.16
GC content: 49.83
Gene sequence:
>606_bases ATGGACATTTCCCTTCACAATCCAGCATCGGATCAAGGCAAGCTTGTCGCCTTCCCTCTCACAGAAACGGCTCAGCCCGA TCGGTCTCAACTTGACAATATTAAAGCCCAGTTAGATCTAGTACTGCTAGCCCTAGAAGCCCTGGTAGGTATTGGCTCTG AAGCTGTTCTCCAAGCTGCAGCCGATCTCAACCTGCAAGATGTCGTCAGCGATCGAGTGTCCCTATGGCGTCTGAGGCAG TCCAATCCTCTCCGCCGAGGTACTGGCGGACGCAAAAAACTGGATATAGAAGAGGCCCGGTCTCTTGTGATGATCAGCTG CCACCTCGCCCACCAACATCAAAGCCTCATCCGAGAAGCTGTGGAATTATTAGAGTCCGTGGCAGAAACTGAGCAACCGT TTCATCAGGTCGCTTTGTTGGGAGATTACTTAGATAACTTCACCAACACTTACCAAGACCGGATGACGGAAGATACCTTA TCCGTTGATGCCCTGACCGATCTAGCCTTAAAGTTACTCATAGATTTGTTATTCTATAGCAACAACCAGGGGCCACGGCG ATTGTGGATGGCCCTGCTTGATCGGGCAAATCATATAGAACGATAA
Upstream 100 bases:
>100_bases TAGCGGCAACCGCCAAGAACCTCGAACCGTAGCCCAACAGTTCCTTCAAGAGACAGGACTTATCTCTCCGACCTAAGCTG GTTTAGGCTCTGTGTTAGAC
Downstream 100 bases:
>100_bases ACTCTTCAGTTGCTTTCTAGCAATACACCCAGATTGGTCACCCGTCTTTAAACACATTGATGCCTTCTATTTCTCGGCAA TATCACCCGCAAAGTTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MDISLHNPASDQGKLVAFPLTETAQPDRSQLDNIKAQLDLVLLALEALVGIGSEAVLQAAADLNLQDVVSDRVSLWRLRQ SNPLRRGTGGRKKLDIEEARSLVMISCHLAHQHQSLIREAVELLESVAETEQPFHQVALLGDYLDNFTNTYQDRMTEDTL SVDALTDLALKLLIDLLFYSNNQGPRRLWMALLDRANHIER
Sequences:
>Translated_201_residues MDISLHNPASDQGKLVAFPLTETAQPDRSQLDNIKAQLDLVLLALEALVGIGSEAVLQAAADLNLQDVVSDRVSLWRLRQ SNPLRRGTGGRKKLDIEEARSLVMISCHLAHQHQSLIREAVELLESVAETEQPFHQVALLGDYLDNFTNTYQDRMTEDTL SVDALTDLALKLLIDLLFYSNNQGPRRLWMALLDRANHIER >Mature_201_residues MDISLHNPASDQGKLVAFPLTETAQPDRSQLDNIKAQLDLVLLALEALVGIGSEAVLQAAADLNLQDVVSDRVSLWRLRQ SNPLRRGTGGRKKLDIEEARSLVMISCHLAHQHQSLIREAVELLESVAETEQPFHQVALLGDYLDNFTNTYQDRMTEDTL SVDALTDLALKLLIDLLFYSNNQGPRRLWMALLDRANHIER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22546; Mature: 22546
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDISLHNPASDQGKLVAFPLTETAQPDRSQLDNIKAQLDLVLLALEALVGIGSEAVLQAA CCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ADLNLQDVVSDRVSLWRLRQSNPLRRGTGGRKKLDIEEARSLVMISCHLAHQHQSLIREA HCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VELLESVAETEQPFHQVALLGDYLDNFTNTYQDRMTEDTLSVDALTDLALKLLIDLLFYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NNQGPRRLWMALLDRANHIER CCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDISLHNPASDQGKLVAFPLTETAQPDRSQLDNIKAQLDLVLLALEALVGIGSEAVLQAA CCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ADLNLQDVVSDRVSLWRLRQSNPLRRGTGGRKKLDIEEARSLVMISCHLAHQHQSLIREA HCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VELLESVAETEQPFHQVALLGDYLDNFTNTYQDRMTEDTLSVDALTDLALKLLIDLLFYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NNQGPRRLWMALLDRANHIER CCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA