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The map label for this gene is perM [C]

Identifier: 158336770

GI number: 158336770

Start: 3694134

End: 3695189

Strand: Reverse

Name: perM [C]

Synonym: AM1_3638

Alternate gene names: 158336770

Gene position: 3695189-3694134 (Counterclockwise)

Preceding gene: 158336771

Following gene: 158336768

Centisome position: 56.82

GC content: 46.02

Gene sequence:

>1056_bases
ATGCCTGCTCCTTACCGCAAATACTTTTTAAATCGCTTGACGAACTCTGTTCTCATTCGTTTTTTGCTTTTATTTGCTTC
AAGTTGGGCCACCCTTCAGGTATTTGCCTATTTTCAAGGCATTTTACTGATTTTTATATTTGCCGCCATTCTGGCCTTTC
TCCTCAACTATCCCACCCAATGGCTGAAGCGGTTTCTCCCCCATGGCGTTGCCGCTACCGTCGTCTTTATGGTGGGATTA
CTGCTGCTGTTTGGCCTCCTGATCACAATTCTGTTTGCCGTCCTCTCTCAAGGACAAGAGCTGGTCAATAGTGTGACTGA
ATTTTTGAACGCCATGGAACAGTTAAGTCGCCAAGCTGAACAGATGCTGGCGGCACGCGATGTCCAAATTGACTTTGGGG
CTATCGAGGCCAAATTCCGAGACCAGGTGATTGAAAGTATTGGGTCTAGTGTCGGGGTCATTCAAGGCATCGTTAACAAT
TTAATCGACCTTATTCTAGTAGCGGTCGTCAGTTTCTTCATGCTGTTAGATGGCGGGCGCATTTGGAAATGGTTGCTCAG
GGGACTCCCCAAAGCGTCTCGGACTCGATTTACCCTAGCGATGAAACGGAATTTCCTAGGTTTTTTCTGGGGACGTTTTT
TATTAGCGTTATTTTTTGCAGTCTCCAGTTTCTTCGTCTTTTTGAGTCTAAGCGTCCCCGTACCGCTCATTTTGGCAGTG
GTTGCGGGTATCTTCGATATGATTCCAGGCATTGGAGCGACCATCGGGATTGGCTTAATCTCTTTGATTCTCTTGCCTCA
AGGGTTATGGAGAGCTATGCAGGTGCTCATCGCCTGTATAGTGCTGCAACAAATTGAAGAGAATATTCTGATGCCCCGAG
TAATGCAGAATTCATTACAAATGAATCCAGTCGTCTTGTTCTTTGCGTTACTGATCGGCTCACGCTTAGCAGGACTAGTC
GGTTTATTCCTATCCATCCCCATTGCTGGGGTTTTGCTGAGCCTGATGGATAATGACACCGAAGAAGATGATAACGAGTT
TTCTAAAGTGTCTTAG

Upstream 100 bases:

>100_bases
AACATGGAAACGTCTTAGAAGCAATCTATGGCTTTTATATAAGATTAAGCGACTGCTCAGCCGAGCATGCAATAGTTGAG
TAGGTTATCCTCTGGTCTCT

Downstream 100 bases:

>100_bases
AGCTAAATAACTAAGCTGATTCAACCAACTGAAGTTCTGGCTCTGCTGGGTTGACGCCAATCATTTCTTCGAGGGCTTCT
GTCGAAACCGTATGCTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MPAPYRKYFLNRLTNSVLIRFLLLFASSWATLQVFAYFQGILLIFIFAAILAFLLNYPTQWLKRFLPHGVAATVVFMVGL
LLLFGLLITILFAVLSQGQELVNSVTEFLNAMEQLSRQAEQMLAARDVQIDFGAIEAKFRDQVIESIGSSVGVIQGIVNN
LIDLILVAVVSFFMLLDGGRIWKWLLRGLPKASRTRFTLAMKRNFLGFFWGRFLLALFFAVSSFFVFLSLSVPVPLILAV
VAGIFDMIPGIGATIGIGLISLILLPQGLWRAMQVLIACIVLQQIEENILMPRVMQNSLQMNPVVLFFALLIGSRLAGLV
GLFLSIPIAGVLLSLMDNDTEEDDNEFSKVS

Sequences:

>Translated_351_residues
MPAPYRKYFLNRLTNSVLIRFLLLFASSWATLQVFAYFQGILLIFIFAAILAFLLNYPTQWLKRFLPHGVAATVVFMVGL
LLLFGLLITILFAVLSQGQELVNSVTEFLNAMEQLSRQAEQMLAARDVQIDFGAIEAKFRDQVIESIGSSVGVIQGIVNN
LIDLILVAVVSFFMLLDGGRIWKWLLRGLPKASRTRFTLAMKRNFLGFFWGRFLLALFFAVSSFFVFLSLSVPVPLILAV
VAGIFDMIPGIGATIGIGLISLILLPQGLWRAMQVLIACIVLQQIEENILMPRVMQNSLQMNPVVLFFALLIGSRLAGLV
GLFLSIPIAGVLLSLMDNDTEEDDNEFSKVS
>Mature_350_residues
PAPYRKYFLNRLTNSVLIRFLLLFASSWATLQVFAYFQGILLIFIFAAILAFLLNYPTQWLKRFLPHGVAATVVFMVGLL
LLFGLLITILFAVLSQGQELVNSVTEFLNAMEQLSRQAEQMLAARDVQIDFGAIEAKFRDQVIESIGSSVGVIQGIVNNL
IDLILVAVVSFFMLLDGGRIWKWLLRGLPKASRTRFTLAMKRNFLGFFWGRFLLALFFAVSSFFVFLSLSVPVPLILAVV
AGIFDMIPGIGATIGIGLISLILLPQGLWRAMQVLIACIVLQQIEENILMPRVMQNSLQMNPVVLFFALLIGSRLAGLVG
LFLSIPIAGVLLSLMDNDTEEDDNEFSKVS

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=342, Percent_Identity=24.8538011695906, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003544
- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39062; Mature: 38930

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPYRKYFLNRLTNSVLIRFLLLFASSWATLQVFAYFQGILLIFIFAAILAFLLNYPTQ
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
WLKRFLPHGVAATVVFMVGLLLLFGLLITILFAVLSQGQELVNSVTEFLNAMEQLSRQAE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
QMLAARDVQIDFGAIEAKFRDQVIESIGSSVGVIQGIVNNLIDLILVAVVSFFMLLDGGR
HHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
IWKWLLRGLPKASRTRFTLAMKRNFLGFFWGRFLLALFFAVSSFFVFLSLSVPVPLILAV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
VAGIFDMIPGIGATIGIGLISLILLPQGLWRAMQVLIACIVLQQIEENILMPRVMQNSLQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
MNPVVLFFALLIGSRLAGLVGLFLSIPIAGVLLSLMDNDTEEDDNEFSKVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC
>Mature Secondary Structure 
PAPYRKYFLNRLTNSVLIRFLLLFASSWATLQVFAYFQGILLIFIFAAILAFLLNYPTQ
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
WLKRFLPHGVAATVVFMVGLLLLFGLLITILFAVLSQGQELVNSVTEFLNAMEQLSRQAE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
QMLAARDVQIDFGAIEAKFRDQVIESIGSSVGVIQGIVNNLIDLILVAVVSFFMLLDGGR
HHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
IWKWLLRGLPKASRTRFTLAMKRNFLGFFWGRFLLALFFAVSSFFVFLSLSVPVPLILAV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
VAGIFDMIPGIGATIGIGLISLILLPQGLWRAMQVLIACIVLQQIEENILMPRVMQNSLQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
MNPVVLFFALLIGSRLAGLVGLFLSIPIAGVLLSLMDNDTEEDDNEFSKVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]