| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is crtR
Identifier: 158336769
GI number: 158336769
Start: 3693173
End: 3694123
Strand: Direct
Name: crtR
Synonym: AM1_3637
Alternate gene names: NA
Gene position: 3693173-3694123 (Clockwise)
Preceding gene: 158336767
Following gene: 158336773
Centisome position: 56.79
GC content: 47.95
Gene sequence:
>951_bases ATGACAGCAAAGGTCACGCCCAAGTCGGTTCCATTTCATTTTCTCGGCCCGCCTGGGGCATTCAATCCAACCCTGCTGTT GTTCTTCGGTGCATTGGCGTTGCTGCTGGGGTCCACCTACGCTCATTACCAGCTGTCGTTACCAGGTTGGTGTACGTTTG TGGCGAATACGTTAGCCCTGCACTTTGCAGGCACCGTGATTCATGATGCCTGTCATAAGGTGGCTCACCAAAATCGTATC GTGAATGCTGCTTTAGGCCATGGCAGTGCATTGATCTTGGGGTTCGCCTTTCCGGTATTTACGCGAGTCCATCTTCAGCA CCATGCTGCCGTCAACGACCCTGACAATGATCCCGATCATTATGTGTCGACGGGTGGTCCGCTATGGTTGATTGCCCCTC GCTTCTTCTATCACGAAGTCTTTTTCTTCAGACGTCGTCTATGGCGAAAGTTTGAGCTGCTGGAGTGGTTCTTAAGCCGC CTATACCTGGTCACCCTAATTGTTTGTGCTTGTAAATTCGACTTTATTCACTACGTTTTGAATTTTTGGTTTGTACCGGC ACTGATTGTGGGGACCACTCTAGGATTCTTTTTTGACTATTTCCCCCATCGCCCATTTCATGAACGGAATCGTTGGCGCA ATGCCCGGGTTTATGCCAACCCTGTCTTGAATGTGTTGATTTTGGGGCAAAACTATCATCTGATTCATCACCTATGGCCT TCTATTCCTTGGTATAAGTGTGAACCTGCTTATCATGCAGTCAAACCTCTATTGGATGAAAAGAACTGTCACCAGCGAAT TGGCATTTTCCAGCGCAAAGGATTTCTTGGATTTGTCTATGACTTCTTCTTAGGTGTTCGCTTTGAGCATACGGTTTCGA CAGAAGCCCTCGAAGAAATGATTGGCGTCAACCCAGCAGAGCCAGAACTTCAGTTGGTTGAATCAGCTTAG
Upstream 100 bases:
>100_bases TGTTCCACCGAACGCCAGGGAATGTCACAAAACTTTATTAATTATTGTAATTGTCGTATACTTCTAACGATGATCCCACC GGAGCAAGGATAGCCCTTAC
Downstream 100 bases:
>100_bases TTATTTAGCTCTAAGACACTTTAGAAAACTCGTTATCATCTTCTTCGGTGTCATTATCCATCAGGCTCAGCAAAACCCCA GCAATGGGGATGGATAGGAA
Product: beta-carotene hydroxylase
Products: NA
Alternate protein names: Fatty Acid Desaturase; Fatty Acid Desaturase Domain Protein; Electron Transfer Protein FdxB; Beta-Carotene Oxygenase CrtR; Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Subfamily; Beta Carotene Hydroxylase; Phthalate 4 5-Dioxygenase; B-Carotene Hydroxylase; Delta(12)-Fatty Acid Dehydrogenase
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MTAKVTPKSVPFHFLGPPGAFNPTLLLFFGALALLLGSTYAHYQLSLPGWCTFVANTLALHFAGTVIHDACHKVAHQNRI VNAALGHGSALILGFAFPVFTRVHLQHHAAVNDPDNDPDHYVSTGGPLWLIAPRFFYHEVFFFRRRLWRKFELLEWFLSR LYLVTLIVCACKFDFIHYVLNFWFVPALIVGTTLGFFFDYFPHRPFHERNRWRNARVYANPVLNVLILGQNYHLIHHLWP SIPWYKCEPAYHAVKPLLDEKNCHQRIGIFQRKGFLGFVYDFFLGVRFEHTVSTEALEEMIGVNPAEPELQLVESA
Sequences:
>Translated_316_residues MTAKVTPKSVPFHFLGPPGAFNPTLLLFFGALALLLGSTYAHYQLSLPGWCTFVANTLALHFAGTVIHDACHKVAHQNRI VNAALGHGSALILGFAFPVFTRVHLQHHAAVNDPDNDPDHYVSTGGPLWLIAPRFFYHEVFFFRRRLWRKFELLEWFLSR LYLVTLIVCACKFDFIHYVLNFWFVPALIVGTTLGFFFDYFPHRPFHERNRWRNARVYANPVLNVLILGQNYHLIHHLWP SIPWYKCEPAYHAVKPLLDEKNCHQRIGIFQRKGFLGFVYDFFLGVRFEHTVSTEALEEMIGVNPAEPELQLVESA >Mature_315_residues TAKVTPKSVPFHFLGPPGAFNPTLLLFFGALALLLGSTYAHYQLSLPGWCTFVANTLALHFAGTVIHDACHKVAHQNRIV NAALGHGSALILGFAFPVFTRVHLQHHAAVNDPDNDPDHYVSTGGPLWLIAPRFFYHEVFFFRRRLWRKFELLEWFLSRL YLVTLIVCACKFDFIHYVLNFWFVPALIVGTTLGFFFDYFPHRPFHERNRWRNARVYANPVLNVLILGQNYHLIHHLWPS IPWYKCEPAYHAVKPLLDEKNCHQRIGIFQRKGFLGFVYDFFLGVRFEHTVSTEALEEMIGVNPAEPELQLVESA
Specific function: Unknown
COG id: COG3239
COG function: function code I; Fatty acid desaturase
Gene ontology:
GO:0006629: Beta-carotene hydroxylase
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.14.13.-
Molecular weight: Translated: 36445; Mature: 36313
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKVTPKSVPFHFLGPPGAFNPTLLLFFGALALLLGSTYAHYQLSLPGWCTFVANTLAL CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHH HFAGTVIHDACHKVAHQNRIVNAALGHGSALILGFAFPVFTRVHLQHHAAVNDPDNDPDH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC YVSTGGPLWLIAPRFFYHEVFFFRRRLWRKFELLEWFLSRLYLVTLIVCACKFDFIHYVL EECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFWFVPALIVGTTLGFFFDYFPHRPFHERNRWRNARVYANPVLNVLILGQNYHLIHHLWP HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEECCCEEEEEECCCCHHHHHHCC SIPWYKCEPAYHAVKPLLDEKNCHQRIGIFQRKGFLGFVYDFFLGVRFEHTVSTEALEEM CCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHH IGVNPAEPELQLVESA HCCCCCCCCHHHCCCC >Mature Secondary Structure TAKVTPKSVPFHFLGPPGAFNPTLLLFFGALALLLGSTYAHYQLSLPGWCTFVANTLAL CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHH HFAGTVIHDACHKVAHQNRIVNAALGHGSALILGFAFPVFTRVHLQHHAAVNDPDNDPDH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC YVSTGGPLWLIAPRFFYHEVFFFRRRLWRKFELLEWFLSRLYLVTLIVCACKFDFIHYVL EECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFWFVPALIVGTTLGFFFDYFPHRPFHERNRWRNARVYANPVLNVLILGQNYHLIHHLWP HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEECCCEEEEEECCCCHHHHHHCC SIPWYKCEPAYHAVKPLLDEKNCHQRIGIFQRKGFLGFVYDFFLGVRFEHTVSTEALEEM CCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHH IGVNPAEPELQLVESA HCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA