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The map label for this gene is yafE [C]

Identifier: 158336743

GI number: 158336743

Start: 3666438

End: 3667292

Strand: Reverse

Name: yafE [C]

Synonym: AM1_3611

Alternate gene names: 158336743

Gene position: 3667292-3666438 (Counterclockwise)

Preceding gene: 158336744

Following gene: 158336742

Centisome position: 56.39

GC content: 41.29

Gene sequence:

>855_bases
ATGCAAGTTGAACAAAACAGATGTCTAACGTGGGAAGAGGCTGTTCAATATCTCCTATCTAACCCTGAACAACAGGAGTT
GGTTAAAGCTTGTTACTATGATGCTCCTTTAGTGGATGCAGCCAATCGATATTGGTGTAGTGAGGAATGGCATGCCATTA
ATGAGTTGCTTCCTACTACCGTTGGATCAGCACTCGACATTGGAGCTGGTAATGGCATTGCGAGCTATGCTCTGGCCAAA
GAAGGATGGCAAGTTCATTCATTAGAACCTGACCCTAGTAACCTAGTCGGTGTCGGTGCCATCTATCATCTTGCAAAAAC
TGCAGAGTTACCGATTCAAGTAACACAAGAATTTGGAGAGACGCTTCCTTTTCCAGACCAATCATTTGAGTTAGTCTTCG
CCCGTCAAGTTCTGCATCATGCCCAAGATCTACAAGAACTTTGCAAAGAAATCAACCGGGTATTAAAGCCAGGTGGTAAG
TTTATTGCTGTCCGCGATCATGTCATTTCATCCAAAGAAGATTTACCAAGATTTCTTGAATCTCATCCTTTGCATCACTT
ATACGGAGGTGAGAATGCTTTTTTGTCTACAGAATACATCAACGCACTACAACAAGCAGGCTTGAGAATCGATCATGTTT
TGAAATCATTCGATAGTAAGATTAACTATGCACCCTTAACGCCTGCTAACATGCAGGCAAAATTTGGCCAACGCCTCCGT
CCATTACCAGGAAGTAAATCTCTAGCTTATCTCATATTTAACTCAATTACTTTTCCTATATTATTACGACTGCTTTCGAC
GTTTGATAATCGCCCAGGTCGATTATATAGTTTTATCTGTAGTAAGCCTTTATAG

Upstream 100 bases:

>100_bases
AAGCAGGGTTAGAAGTCATGAAGGATATGCCTTTGTATGATGTCAACACTGATAGCCTAATTAAAGTACGTGATCTTACA
GCCGTTGAGGTTGATGGATG

Downstream 100 bases:

>100_bases
TACATAAAATCTTACTTCAGTAGCTTGCTACAAAACACAAAAGTTATTCATGAATTGTACTCAAAAATATCAATGAAGAA
TTTGGCCGTCAGCAAGTATT

Product: methyltransferase

Products: NA

Alternate protein names: Ubiquinone/Menaquinone Biosynthesis Methylase-Like Protein; Ubiquinone Biosynthesis O-Methyltransferase; Methyltransferase; SAM-Dependent Methyltransferase Protein

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MQVEQNRCLTWEEAVQYLLSNPEQQELVKACYYDAPLVDAANRYWCSEEWHAINELLPTTVGSALDIGAGNGIASYALAK
EGWQVHSLEPDPSNLVGVGAIYHLAKTAELPIQVTQEFGETLPFPDQSFELVFARQVLHHAQDLQELCKEINRVLKPGGK
FIAVRDHVISSKEDLPRFLESHPLHHLYGGENAFLSTEYINALQQAGLRIDHVLKSFDSKINYAPLTPANMQAKFGQRLR
PLPGSKSLAYLIFNSITFPILLRLLSTFDNRPGRLYSFICSKPL

Sequences:

>Translated_284_residues
MQVEQNRCLTWEEAVQYLLSNPEQQELVKACYYDAPLVDAANRYWCSEEWHAINELLPTTVGSALDIGAGNGIASYALAK
EGWQVHSLEPDPSNLVGVGAIYHLAKTAELPIQVTQEFGETLPFPDQSFELVFARQVLHHAQDLQELCKEINRVLKPGGK
FIAVRDHVISSKEDLPRFLESHPLHHLYGGENAFLSTEYINALQQAGLRIDHVLKSFDSKINYAPLTPANMQAKFGQRLR
PLPGSKSLAYLIFNSITFPILLRLLSTFDNRPGRLYSFICSKPL
>Mature_284_residues
MQVEQNRCLTWEEAVQYLLSNPEQQELVKACYYDAPLVDAANRYWCSEEWHAINELLPTTVGSALDIGAGNGIASYALAK
EGWQVHSLEPDPSNLVGVGAIYHLAKTAELPIQVTQEFGETLPFPDQSFELVFARQVLHHAQDLQELCKEINRVLKPGGK
FIAVRDHVISSKEDLPRFLESHPLHHLYGGENAFLSTEYINALQQAGLRIDHVLKSFDSKINYAPLTPANMQAKFGQRLR
PLPGSKSLAYLIFNSITFPILLRLLSTFDNRPGRLYSFICSKPL

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31932; Mature: 31932

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVEQNRCLTWEEAVQYLLSNPEQQELVKACYYDAPLVDAANRYWCSEEWHAINELLPTT
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHH
VGSALDIGAGNGIASYALAKEGWQVHSLEPDPSNLVGVGAIYHLAKTAELPIQVTQEFGE
HCCHHCCCCCCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCC
TLPFPDQSFELVFARQVLHHAQDLQELCKEINRVLKPGGKFIAVRDHVISSKEDLPRFLE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCHHHHHHHHH
SHPLHHLYGGENAFLSTEYINALQQAGLRIDHVLKSFDSKINYAPLTPANMQAKFGQRLR
HCCCHHHCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC
PLPGSKSLAYLIFNSITFPILLRLLSTFDNRPGRLYSFICSKPL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MQVEQNRCLTWEEAVQYLLSNPEQQELVKACYYDAPLVDAANRYWCSEEWHAINELLPTT
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHH
VGSALDIGAGNGIASYALAKEGWQVHSLEPDPSNLVGVGAIYHLAKTAELPIQVTQEFGE
HCCHHCCCCCCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCC
TLPFPDQSFELVFARQVLHHAQDLQELCKEINRVLKPGGKFIAVRDHVISSKEDLPRFLE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCHHHHHHHHH
SHPLHHLYGGENAFLSTEYINALQQAGLRIDHVLKSFDSKINYAPLTPANMQAKFGQRLR
HCCCHHHCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC
PLPGSKSLAYLIFNSITFPILLRLLSTFDNRPGRLYSFICSKPL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA