| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158336636
Identifier: 158336636
GI number: 158336636
Start: 3545313
End: 3546110
Strand: Direct
Name: 158336636
Synonym: AM1_3504
Alternate gene names: NA
Gene position: 3545313-3546110 (Clockwise)
Preceding gene: 158336634
Following gene: 158336638
Centisome position: 54.51
GC content: 49.37
Gene sequence:
>798_bases ATGGGTGTTGGAATTATTCTGGTGTGTGCTCTCTTCCTGTTGGTGATCTGGCTGGCCTTTCAGCCCAAGCAGGGAGAAAC GGCAGCGAACTCGCCAGACAAAGACGACCCACCCTATATCCCCCCTCCACCCTCGAAAAAGACTGCTAATTTCTCTGATG ATGACTCCAATTTGTCCCCAGATGTACCGAATGTGGAGCATCTATCTGATTCGCAGGTAGAAAAGTCTTACTTTGATGAT GAATCCTCACCTCTTATAGCTGATCCTTCTCTTTTAAATCTCGACGGGATAGGCGACGACGGAGACGATGCCTCTAGGCA AGGTCCCATTGTCATTAGTGATGATCTCCGACAGCAGGTTCAACAACTCGTGGCGGCAGGACGTGAGATTACCGCAGTTA AAAAGTTGCGGCAACAGGGCATGGAGCTGAATGAAGCTCGACAATACCTGGATGCTTTGCCCACCCCTCCTCCTACCGAT GTATTGGGACCCTCATCGAGACAGCAAAATTATGAGCAGGTTGAAGCTGAAGTTCGGCGACTCCTGACCCAGGACCAAAA AATTCAGGCCATTAAATATGTTCGTGAGCAATGGGGCTATGGTCTCAAGGCGGCAAAAGCCTATGTTGAATCCTTGGAGG GAACAAGCAGTCCATCCCAAAATTCAGACGATGTTGATGCAGAGGTTCGGCTGCTGCTCTCGCAAAACCGCAAAATCGAA GCCATTAAATTGGTGCGTCTGCGATGGGGGTATGACCTCAAGGACGCCAAGAACTATGTGGAGTCTTTAGGAAGATAA
Upstream 100 bases:
>100_bases ATTAAACCTCTGGGTGCCGAACAAATTTCTAATGACAGCAACGGATTCCAACTCCTGAAGTATAATCTTGCCCAACGAGT TGCTGAGAGTATCAAGGGTT
Downstream 100 bases:
>100_bases ATCAGGTTGACTAGCAATCGACTAATCCAGAATTAACTCTCTTTGCTCAATCCGTTGACTGAGCAGTTGCTTATTCCCTT GGGTCACCACTAAACGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MGVGIILVCALFLLVIWLAFQPKQGETAANSPDKDDPPYIPPPPSKKTANFSDDDSNLSPDVPNVEHLSDSQVEKSYFDD ESSPLIADPSLLNLDGIGDDGDDASRQGPIVISDDLRQQVQQLVAAGREITAVKKLRQQGMELNEARQYLDALPTPPPTD VLGPSSRQQNYEQVEAEVRRLLTQDQKIQAIKYVREQWGYGLKAAKAYVESLEGTSSPSQNSDDVDAEVRLLLSQNRKIE AIKLVRLRWGYDLKDAKNYVESLGR
Sequences:
>Translated_265_residues MGVGIILVCALFLLVIWLAFQPKQGETAANSPDKDDPPYIPPPPSKKTANFSDDDSNLSPDVPNVEHLSDSQVEKSYFDD ESSPLIADPSLLNLDGIGDDGDDASRQGPIVISDDLRQQVQQLVAAGREITAVKKLRQQGMELNEARQYLDALPTPPPTD VLGPSSRQQNYEQVEAEVRRLLTQDQKIQAIKYVREQWGYGLKAAKAYVESLEGTSSPSQNSDDVDAEVRLLLSQNRKIE AIKLVRLRWGYDLKDAKNYVESLGR >Mature_264_residues GVGIILVCALFLLVIWLAFQPKQGETAANSPDKDDPPYIPPPPSKKTANFSDDDSNLSPDVPNVEHLSDSQVEKSYFDDE SSPLIADPSLLNLDGIGDDGDDASRQGPIVISDDLRQQVQQLVAAGREITAVKKLRQQGMELNEARQYLDALPTPPPTDV LGPSSRQQNYEQVEAEVRRLLTQDQKIQAIKYVREQWGYGLKAAKAYVESLEGTSSPSQNSDDVDAEVRLLLSQNRKIEA IKLVRLRWGYDLKDAKNYVESLGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29390; Mature: 29259
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVGIILVCALFLLVIWLAFQPKQGETAANSPDKDDPPYIPPPPSKKTANFSDDDSNLSP CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DVPNVEHLSDSQVEKSYFDDESSPLIADPSLLNLDGIGDDGDDASRQGPIVISDDLRQQV CCCCHHHCCHHHHHHHHCCCCCCCEEECCCEEECCCCCCCCCCCCCCCCEEECHHHHHHH QQLVAAGREITAVKKLRQQGMELNEARQYLDALPTPPPTDVLGPSSRQQNYEQVEAEVRR HHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH LLTQDQKIQAIKYVREQWGYGLKAAKAYVESLEGTSSPSQNSDDVDAEVRLLLSQNRKIE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCH AIKLVRLRWGYDLKDAKNYVESLGR HHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure GVGIILVCALFLLVIWLAFQPKQGETAANSPDKDDPPYIPPPPSKKTANFSDDDSNLSP CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DVPNVEHLSDSQVEKSYFDDESSPLIADPSLLNLDGIGDDGDDASRQGPIVISDDLRQQV CCCCHHHCCHHHHHHHHCCCCCCCEEECCCEEECCCCCCCCCCCCCCCCEEECHHHHHHH QQLVAAGREITAVKKLRQQGMELNEARQYLDALPTPPPTDVLGPSSRQQNYEQVEAEVRR HHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH LLTQDQKIQAIKYVREQWGYGLKAAKAYVESLEGTSSPSQNSDDVDAEVRLLLSQNRKIE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCH AIKLVRLRWGYDLKDAKNYVESLGR HHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA