Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158336611

Identifier: 158336611

GI number: 158336611

Start: 3511640

End: 3512086

Strand: Direct

Name: 158336611

Synonym: AM1_3478

Alternate gene names: NA

Gene position: 3511640-3512086 (Clockwise)

Preceding gene: 158336610

Following gene: 158336613

Centisome position: 53.99

GC content: 47.87

Gene sequence:

>447_bases
ATGAGAACACATCATCATCGGGGGGATGATCGCCAAAAAATTATTGCCTTATGGACGGCCTTTCTATTGGGCATGCTCTT
TCATACCCAACTGGCTTTAATGCCGTTGTTTCATGGGCTGAGTGTGGCCCACTCCCATATCAATGATCTACCCCTCACTA
CTCTTTTTTGGCTGGTGTTGGGCGTTTTTGGCATGGCGATGGCTGCCATTATTGCCACCGCTTTTGTGAAAGGACAACGA
TACAAAACGCTACATTTTGGCTTGACGTTGCTTTATACCGTCATCAATATTAGCCACCTAACCCTGGACCTCATCGTCGG
GGTCCCCAGCTATCAGCTTTGTCTGATGGGGTATCTGCTGTTGATTGGTCTCCTGCTAAACCTTGTCGCGTTTCAATGGT
TTCACTCAGAGTTGGATAAACAACCGGTCTTGAGGTCAGCCCGTTGA

Upstream 100 bases:

>100_bases
TGGTCATACCTATCCCCACTTTTCTTTCTCTAGAGACTCACAAGTTCCTCAACTTTCATCCATAAGCTGAAAAAAGAGGC
TATGGAACAGGAGTCTGAGC

Downstream 100 bases:

>100_bases
CTATTAAGACCGGTTTTCCTGACCGTTTGACCGATGTCTCCCTGGTGCGATCGCAAAAATACGCTCATAATTGGAGTAGC
GATGCCCTAAGCGATGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MRTHHHRGDDRQKIIALWTAFLLGMLFHTQLALMPLFHGLSVAHSHINDLPLTTLFWLVLGVFGMAMAAIIATAFVKGQR
YKTLHFGLTLLYTVINISHLTLDLIVGVPSYQLCLMGYLLLIGLLLNLVAFQWFHSELDKQPVLRSAR

Sequences:

>Translated_148_residues
MRTHHHRGDDRQKIIALWTAFLLGMLFHTQLALMPLFHGLSVAHSHINDLPLTTLFWLVLGVFGMAMAAIIATAFVKGQR
YKTLHFGLTLLYTVINISHLTLDLIVGVPSYQLCLMGYLLLIGLLLNLVAFQWFHSELDKQPVLRSAR
>Mature_148_residues
MRTHHHRGDDRQKIIALWTAFLLGMLFHTQLALMPLFHGLSVAHSHINDLPLTTLFWLVLGVFGMAMAAIIATAFVKGQR
YKTLHFGLTLLYTVINISHLTLDLIVGVPSYQLCLMGYLLLIGLLLNLVAFQWFHSELDKQPVLRSAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16774; Mature: 16774

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTHHHRGDDRQKIIALWTAFLLGMLFHTQLALMPLFHGLSVAHSHINDLPLTTLFWLVL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
GVFGMAMAAIIATAFVKGQRYKTLHFGLTLLYTVINISHLTLDLIVGVPSYQLCLMGYLL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LIGLLLNLVAFQWFHSELDKQPVLRSAR
HHHHHHHHHHHHHHHHHHCCCCHHCCCC
>Mature Secondary Structure
MRTHHHRGDDRQKIIALWTAFLLGMLFHTQLALMPLFHGLSVAHSHINDLPLTTLFWLVL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
GVFGMAMAAIIATAFVKGQRYKTLHFGLTLLYTVINISHLTLDLIVGVPSYQLCLMGYLL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LIGLLLNLVAFQWFHSELDKQPVLRSAR
HHHHHHHHHHHHHHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA