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The map label for this gene is yvrB [H]

Identifier: 158336550

GI number: 158336550

Start: 3445238

End: 3446218

Strand: Direct

Name: yvrB [H]

Synonym: AM1_3414

Alternate gene names: 158336550

Gene position: 3445238-3446218 (Clockwise)

Preceding gene: 158336549

Following gene: 158336551

Centisome position: 52.97

GC content: 52.91

Gene sequence:

>981_bases
GTGCAACGTGCTTCATTGATGGGCATCTTAGGTGCCGGACTCGTCATTACAATTTTGCTGTCCTTAGGCCAAGGCTCCGT
GGATATGGGCCTGCAAGAAGTCTGGCAAGCCCTGTGGCACCAAGGACCTGAACTGAATCAAACCATCTTATGGGACCTGA
GATTGCCTCGGATTGCTGCTGCGCTGTTGGTGGGATCTGCCTTGGGAATGTCGGGTGCCTTATTGCAAGGAATGCTACGA
AACGGTCTGGCCGATCCGTTTATCCTAGGGATTTCGGCAGGGGCTGGTTTGGTTGCGATCGCACTTCTCACCCTCAATAT
CTTCTTAAGCTGGTTGCCCGTCGCTGCCTGGGTTGGCGCTGTTTTGACCTCGGCGTTAGTCTATCGTTTAGGCCACACTG
CCAACGGGATTGCGGTGGAACGTTTGGTCTTAGGTGGGGTTGCGGTTAGCTCTTTATTAGGTGCAGTACAAACCACCCTA
CTCTTGTTGTCTGATGATGGTCGGATTCAAGCCGCTCTTAATTGGCTGATTGGCAGTTTAAATGGACGAGGCTGGACAGA
AGTGGTGAATGCTGGTCCCTATATTGGCGGTGCGCTGATTGCAGGCTGTTTGCTGTCCCGCAATATCAATATCCTCAATT
TGGGAGATGAGCTAGCGGTGGGTTTGGGGGTATCGTTGACGCGATCGCGCCTCTTAATCGGTGGGATCGCTACCCTATTA
GCCGCCAGTGCTGTGAGCATGGCTGGATTAATTGGCTTTGTTGGTTTAGTCGTCCCCCATGGTGTCCGCCTCTTAGTGGG
CACGGACTATCGCTGGGTCGTTCCTTTGTCTGCTCTTGGCGGGGCCTGGGTGTTGATTTTAGCCGATCTGCTGGCTCGGT
TAGGAGCCGTTGAACTGCCTGTAGGTGCAGTCACTGCTCTTTTAGGTTCTCCTCTGTTTATCTGGCTGCTGTATCGTCGT
ATATCTCCGTTAGGAGTGTGA

Upstream 100 bases:

>100_bases
TCTGCCCCAGCTCCAGCTGCTCCGCCTCCTTTAGAGTAAAGAGATAAGAGCTTACCTTATGTTCAATTTACCCTCAACGT
TTTAGGCGGACTCAAAAGCT

Downstream 100 bases:

>100_bases
CCATGCTCCTAGACCTTCAAAAAATTAGCGGTGGATATGACCAAACCAGCATTGTTAAAGATGTTGCGTTTACCCTGCAG
GAGGGCGAGTGGCTGAGTTT

Product: iron compound ABC transporter permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MQRASLMGILGAGLVITILLSLGQGSVDMGLQEVWQALWHQGPELNQTILWDLRLPRIAAALLVGSALGMSGALLQGMLR
NGLADPFILGISAGAGLVAIALLTLNIFLSWLPVAAWVGAVLTSALVYRLGHTANGIAVERLVLGGVAVSSLLGAVQTTL
LLLSDDGRIQAALNWLIGSLNGRGWTEVVNAGPYIGGALIAGCLLSRNINILNLGDELAVGLGVSLTRSRLLIGGIATLL
AASAVSMAGLIGFVGLVVPHGVRLLVGTDYRWVVPLSALGGAWVLILADLLARLGAVELPVGAVTALLGSPLFIWLLYRR
ISPLGV

Sequences:

>Translated_326_residues
MQRASLMGILGAGLVITILLSLGQGSVDMGLQEVWQALWHQGPELNQTILWDLRLPRIAAALLVGSALGMSGALLQGMLR
NGLADPFILGISAGAGLVAIALLTLNIFLSWLPVAAWVGAVLTSALVYRLGHTANGIAVERLVLGGVAVSSLLGAVQTTL
LLLSDDGRIQAALNWLIGSLNGRGWTEVVNAGPYIGGALIAGCLLSRNINILNLGDELAVGLGVSLTRSRLLIGGIATLL
AASAVSMAGLIGFVGLVVPHGVRLLVGTDYRWVVPLSALGGAWVLILADLLARLGAVELPVGAVTALLGSPLFIWLLYRR
ISPLGV
>Mature_326_residues
MQRASLMGILGAGLVITILLSLGQGSVDMGLQEVWQALWHQGPELNQTILWDLRLPRIAAALLVGSALGMSGALLQGMLR
NGLADPFILGISAGAGLVAIALLTLNIFLSWLPVAAWVGAVLTSALVYRLGHTANGIAVERLVLGGVAVSSLLGAVQTTL
LLLSDDGRIQAALNWLIGSLNGRGWTEVVNAGPYIGGALIAGCLLSRNINILNLGDELAVGLGVSLTRSRLLIGGIATLL
AASAVSMAGLIGFVGLVVPHGVRLLVGTDYRWVVPLSALGGAWVLILADLLARLGAVELPVGAVTALLGSPLFIWLLYRR
ISPLGV

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=318, Percent_Identity=39.622641509434, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1790741, Length=296, Percent_Identity=38.5135135135135, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI1786804, Length=255, Percent_Identity=39.2156862745098, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1788004, Length=282, Percent_Identity=37.5886524822695, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1786805, Length=295, Percent_Identity=37.9661016949153, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1786347, Length=293, Percent_Identity=32.7645051194539, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 33662; Mature: 33662

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRASLMGILGAGLVITILLSLGQGSVDMGLQEVWQALWHQGPELNQTILWDLRLPRIAA
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHH
ALLVGSALGMSGALLQGMLRNGLADPFILGISAGAGLVAIALLTLNIFLSWLPVAAWVGA
HHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VLTSALVYRLGHTANGIAVERLVLGGVAVSSLLGAVQTTLLLLSDDGRIQAALNWLIGSL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCC
NGRGWTEVVNAGPYIGGALIAGCLLSRNINILNLGDELAVGLGVSLTRSRLLIGGIATLL
CCCCHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCHHHHHCCHHHHHHHHHHHHHHHHH
AASAVSMAGLIGFVGLVVPHGVRLLVGTDYRWVVPLSALGGAWVLILADLLARLGAVELP
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCC
VGAVTALLGSPLFIWLLYRRISPLGV
HHHHHHHHCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQRASLMGILGAGLVITILLSLGQGSVDMGLQEVWQALWHQGPELNQTILWDLRLPRIAA
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHH
ALLVGSALGMSGALLQGMLRNGLADPFILGISAGAGLVAIALLTLNIFLSWLPVAAWVGA
HHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VLTSALVYRLGHTANGIAVERLVLGGVAVSSLLGAVQTTLLLLSDDGRIQAALNWLIGSL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCC
NGRGWTEVVNAGPYIGGALIAGCLLSRNINILNLGDELAVGLGVSLTRSRLLIGGIATLL
CCCCHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCHHHHHCCHHHHHHHHHHHHHHHHH
AASAVSMAGLIGFVGLVVPHGVRLLVGTDYRWVVPLSALGGAWVLILADLLARLGAVELP
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCC
VGAVTALLGSPLFIWLLYRRISPLGV
HHHHHHHHCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]