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The map label for this gene is exbB [C]

Identifier: 158336547

GI number: 158336547

Start: 3442489

End: 3443142

Strand: Reverse

Name: exbB [C]

Synonym: AM1_3411

Alternate gene names: 158336547

Gene position: 3443142-3442489 (Counterclockwise)

Preceding gene: 158336548

Following gene: 158336546

Centisome position: 52.94

GC content: 48.78

Gene sequence:

>654_bases
ATGCAATTTGGCCAAATCATTACGGCGGGGGGAATTGTAATGCTCCCTCTCATGGTATTTTCACTAATTGCTACGGCTCT
GGTGATTGAGCGATTGATCTTTTGGACCAGGCTTAATCGCAATCAACTGCGAATCGTTAAGCGGACGCTGCAGCTCTATC
GGCTTGATAATGTTTATGATGCGTTGGGGTATGTGCAGGAGCAGGCAAAGTATCCCATAGCGCGCATTTTCTTAGCAGCT
CTATCGTTAGAGGAGCCCACACCGGATGAATTCCGTTTGGCGTTGGAGAGTGAAGCCCAAGCTGAGCTACCCACGCTAAA
GCGGTTTACCACGGTGTTTGACACCATTATTAGTATTGCCCCTTTACTGGGACTCTTGGGAACGGTATTGGGTCTGATCA
ACTCCTTCTCTTCACTGGATATGGGCAATATCGGGGGGAGTGAAACAGCAGGAGTAACGGGGGGAATTAGTACAGCCTTA
ATCTCAACAGCTGCAGGGTTGATTGTGGCGATTTCAACACTTATTTTCGCCAATGCATTTCGCAGTTTATACCAGCGCCA
GTTGGCTTTTATTCAAGAGCATGGGGGACAGCTGGAGTTGCTGTATCGTCACCGCTATGAACGAGGCAGGGTGAATCATG
CGCTTACCCGATGA

Upstream 100 bases:

>100_bases
CAGTTGTGAGTCTTCACAGGATTAGCGCGTCTTAGAGCCAGTGCCGGTTTCGGTCACATCAATCGGTCTTCCCTATCGCA
GTATGGAGTGGTATACATAC

Downstream 100 bases:

>100_bases
TCCAAGTCCATCGGCTCAAATCAATATTGTGCCGATGATTGATGTTATTTTTGCCATTCTGTCCTTTTTTATCATTGCCA
CGTTATTCCTCAACCGCAGT

Product: MotA/TolQ/ExbB family proton channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MQFGQIITAGGIVMLPLMVFSLIATALVIERLIFWTRLNRNQLRIVKRTLQLYRLDNVYDALGYVQEQAKYPIARIFLAA
LSLEEPTPDEFRLALESEAQAELPTLKRFTTVFDTIISIAPLLGLLGTVLGLINSFSSLDMGNIGGSETAGVTGGISTAL
ISTAAGLIVAISTLIFANAFRSLYQRQLAFIQEHGGQLELLYRHRYERGRVNHALTR

Sequences:

>Translated_217_residues
MQFGQIITAGGIVMLPLMVFSLIATALVIERLIFWTRLNRNQLRIVKRTLQLYRLDNVYDALGYVQEQAKYPIARIFLAA
LSLEEPTPDEFRLALESEAQAELPTLKRFTTVFDTIISIAPLLGLLGTVLGLINSFSSLDMGNIGGSETAGVTGGISTAL
ISTAAGLIVAISTLIFANAFRSLYQRQLAFIQEHGGQLELLYRHRYERGRVNHALTR
>Mature_217_residues
MQFGQIITAGGIVMLPLMVFSLIATALVIERLIFWTRLNRNQLRIVKRTLQLYRLDNVYDALGYVQEQAKYPIARIFLAA
LSLEEPTPDEFRLALESEAQAELPTLKRFTTVFDTIISIAPLLGLLGTVLGLINSFSSLDMGNIGGSETAGVTGGISTAL
ISTAAGLIVAISTLIFANAFRSLYQRQLAFIQEHGGQLELLYRHRYERGRVNHALTR

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates. Protects exbD from proteolytic degradation and functionally stabilizes tonB [H]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 24027; Mature: 24027

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFGQIITAGGIVMLPLMVFSLIATALVIERLIFWTRLNRNQLRIVKRTLQLYRLDNVYD
CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ALGYVQEQAKYPIARIFLAALSLEEPTPDEFRLALESEAQAELPTLKRFTTVFDTIISIA
HHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLLGLLGTVLGLINSFSSLDMGNIGGSETAGVTGGISTALISTAAGLIVAISTLIFANAF
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RSLYQRQLAFIQEHGGQLELLYRHRYERGRVNHALTR
HHHHHHHHHHHHHCCCCEEHHHHHHHHHCCHHHHHCC
>Mature Secondary Structure
MQFGQIITAGGIVMLPLMVFSLIATALVIERLIFWTRLNRNQLRIVKRTLQLYRLDNVYD
CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ALGYVQEQAKYPIARIFLAALSLEEPTPDEFRLALESEAQAELPTLKRFTTVFDTIISIA
HHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLLGLLGTVLGLINSFSSLDMGNIGGSETAGVTGGISTALISTAAGLIVAISTLIFANAF
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RSLYQRQLAFIQEHGGQLELLYRHRYERGRVNHALTR
HHHHHHHHHHHHHCCCCEEHHHHHHHHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]