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The map label for this gene is yhfQ [H]

Identifier: 158336533

GI number: 158336533

Start: 3425597

End: 3426667

Strand: Reverse

Name: yhfQ [H]

Synonym: AM1_3397

Alternate gene names: 158336533

Gene position: 3426667-3425597 (Counterclockwise)

Preceding gene: 158336534

Following gene: 158336532

Centisome position: 52.69

GC content: 45.47

Gene sequence:

>1071_bases
ATGAGGAGACATGGCAGTCGATTGCTCAAATATGGTCTGTTGTGGACGAGTCTTTTGGGCCTGATGGCCTGTGGTAACTC
AGACCTCAATCGTAATAGCCCCGATGTAGATAACTCACCATGTCGGATCGTTAAACACGACTTAGACCAAGTTGAAGTCT
GCGGTCAACCCAAAACTATCGTGGTCCTCAGTAGCCATATGCTGGATCTCCTTCTGGCCTTAGGGGAGCAACCGGATGCC
TTAGCTGGACCCATAGGACTGGTAAAGGAGGATGTATTTCAAAACCCTGCTCAACAAATTCCGTATTTGGGCGCACAAGT
CACCACTCAGCCCGTCAATCTGGGCAGTGGGCAAGCCCCTTCAATGGAAAAGATAACGGCATTGAAGCCTGATTTGATTC
TGGCTGAAGCGGGCAGAAATGCAGATAGTTATCAACTGTTCTCCAAAATAGCCCCCACCTTGTTATGGAAGGATCGAACG
GCTAAGAGGAAATGGCAAACAACCCTCAAAGGTTTAGCCAAAGCGTTGGGAAAAGAGGAAAAAATCCAACCAGTGATTGC
AGCCTATAACCAAGAGATTGATCAAACGAAGAAACAATTGGCACCAATTGCTGCTCAGTATCCAAAAGTTTTGATTTTGG
GAAGCAATGATTTAAACAGCAATATGAACATTATTCCACCCGATAGCTATTTAGGTGACTTGTTTGAACAACTGGGCTTT
CAAGTGATGACTTTGCCTGATACCAAGGGACCGTTTGTCAATGTGCCTATTTCCATTGAGGCGCTGCCTCAGTTAAATGA
GGCAGACATAATTATCGTCTTGGGATATAACCTGGATGCCAAAGAGCGGCCTAACCTCAAGCAAGGGAGTATTGATAAAG
CCATTGAGTCGCACCAATCACAATCGATTCGCAAAAGTTGGGAAGAAAATGCGATCGCACAATCTCTAACTGCTAGCAAA
GAAGACCGAGTTTACTTTGCCACTTACTACAAATGGAATGGCCTTAATGGTCCTACAGGAGCTAAGCTCATCCTGGAGCA
GCTCCGGCAGTTTTTGTTAAAAGATGCTTGA

Upstream 100 bases:

>100_bases
GATGTGGACTACATCCAAGGTGGTGAAGGTAGTAGAACCAATGAAATATATCCAGGTGACGGATTTACGGTTATCGGCTC
CGTCTCGGTGGAGCTGTAGC

Downstream 100 bases:

>100_bases
AGGCAAACAGAAACTTTCAACCGAATTACAACTAAGCACGAGTATTTTGATTGCTTGGCCACGAGAGTAGCAGAAGGTCT
CTGTTAAGCTGTACTTAAAT

Product: iron(III) dicitrate ABC transporter periplasmic iron(III) dicitrate-binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MRRHGSRLLKYGLLWTSLLGLMACGNSDLNRNSPDVDNSPCRIVKHDLDQVEVCGQPKTIVVLSSHMLDLLLALGEQPDA
LAGPIGLVKEDVFQNPAQQIPYLGAQVTTQPVNLGSGQAPSMEKITALKPDLILAEAGRNADSYQLFSKIAPTLLWKDRT
AKRKWQTTLKGLAKALGKEEKIQPVIAAYNQEIDQTKKQLAPIAAQYPKVLILGSNDLNSNMNIIPPDSYLGDLFEQLGF
QVMTLPDTKGPFVNVPISIEALPQLNEADIIIVLGYNLDAKERPNLKQGSIDKAIESHQSQSIRKSWEENAIAQSLTASK
EDRVYFATYYKWNGLNGPTGAKLILEQLRQFLLKDA

Sequences:

>Translated_356_residues
MRRHGSRLLKYGLLWTSLLGLMACGNSDLNRNSPDVDNSPCRIVKHDLDQVEVCGQPKTIVVLSSHMLDLLLALGEQPDA
LAGPIGLVKEDVFQNPAQQIPYLGAQVTTQPVNLGSGQAPSMEKITALKPDLILAEAGRNADSYQLFSKIAPTLLWKDRT
AKRKWQTTLKGLAKALGKEEKIQPVIAAYNQEIDQTKKQLAPIAAQYPKVLILGSNDLNSNMNIIPPDSYLGDLFEQLGF
QVMTLPDTKGPFVNVPISIEALPQLNEADIIIVLGYNLDAKERPNLKQGSIDKAIESHQSQSIRKSWEENAIAQSLTASK
EDRVYFATYYKWNGLNGPTGAKLILEQLRQFLLKDA
>Mature_356_residues
MRRHGSRLLKYGLLWTSLLGLMACGNSDLNRNSPDVDNSPCRIVKHDLDQVEVCGQPKTIVVLSSHMLDLLLALGEQPDA
LAGPIGLVKEDVFQNPAQQIPYLGAQVTTQPVNLGSGQAPSMEKITALKPDLILAEAGRNADSYQLFSKIAPTLLWKDRT
AKRKWQTTLKGLAKALGKEEKIQPVIAAYNQEIDQTKKQLAPIAAQYPKVLILGSNDLNSNMNIIPPDSYLGDLFEQLGF
QVMTLPDTKGPFVNVPISIEALPQLNEADIIIVLGYNLDAKERPNLKQGSIDKAIESHQSQSIRKSWEENAIAQSLTASK
EDRVYFATYYKWNGLNGPTGAKLILEQLRQFLLKDA

Specific function: Binds Citrate-Dependent Iron(III); Part Of The Binding- Protein-Dependent Transport System For Uptake Of Citrate-Dependent Iron(III). [C]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=293, Percent_Identity=25.938566552901, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 39293; Mature: 39293

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRHGSRLLKYGLLWTSLLGLMACGNSDLNRNSPDVDNSPCRIVKHDLDQVEVCGQPKTI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHCCCCCEE
VVLSSHMLDLLLALGEQPDALAGPIGLVKEDVFQNPAQQIPYLGAQVTTQPVNLGSGQAP
EEEHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHCCHHHHCCCCCCEEEECCCCCCCCCCC
SMEKITALKPDLILAEAGRNADSYQLFSKIAPTLLWKDRTAKRKWQTTLKGLAKALGKEE
CHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHH
KIQPVIAAYNQEIDQTKKQLAPIAAQYPKVLILGSNDLNSNMNIIPPDSYLGDLFEQLGF
HCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEECCHHHHHHHHHHHCC
QVMTLPDTKGPFVNVPISIEALPQLNEADIIIVLGYNLDAKERPNLKQGSIDKAIESHQS
EEEECCCCCCCEEECCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
QSIRKSWEENAIAQSLTASKEDRVYFATYYKWNGLNGPTGAKLILEQLRQFLLKDA
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRHGSRLLKYGLLWTSLLGLMACGNSDLNRNSPDVDNSPCRIVKHDLDQVEVCGQPKTI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHCCCCCEE
VVLSSHMLDLLLALGEQPDALAGPIGLVKEDVFQNPAQQIPYLGAQVTTQPVNLGSGQAP
EEEHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHCCHHHHCCCCCCEEEECCCCCCCCCCC
SMEKITALKPDLILAEAGRNADSYQLFSKIAPTLLWKDRTAKRKWQTTLKGLAKALGKEE
CHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHH
KIQPVIAAYNQEIDQTKKQLAPIAAQYPKVLILGSNDLNSNMNIIPPDSYLGDLFEQLGF
HCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEECCHHHHHHHHHHHCC
QVMTLPDTKGPFVNVPISIEALPQLNEADIIIVLGYNLDAKERPNLKQGSIDKAIESHQS
EEEECCCCCCCEEECCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
QSIRKSWEENAIAQSLTASKEDRVYFATYYKWNGLNGPTGAKLILEQLRQFLLKDA
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]