| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is yfiZ [H]
Identifier: 158336486
GI number: 158336486
Start: 3382970
End: 3383995
Strand: Reverse
Name: yfiZ [H]
Synonym: AM1_3350
Alternate gene names: 158336486
Gene position: 3383995-3382970 (Counterclockwise)
Preceding gene: 158336488
Following gene: 158336485
Centisome position: 52.03
GC content: 52.53
Gene sequence:
>1026_bases GTGTCTACTGTTCCTGCTCGGCGTCAGTTGCTCCAGTCCCCTGTTCTCCTGGGATTGGGATTGGTCTTAGGGATAGGACT ACTGTTGGTTTGTTTTATGGCCAGTGTAGGGCTAGGAGTTGCTGATATCAGCCTCAAAACGGTGTATCAAGCCCTGACAG ACTTTGATGGATCGACAGATCAACTGATTATTCGCACCGTTAGAATTCCACGCTCCATTACTGCCTTATTGGTCGGTAGC GCTGTTGCGATGGCAGGGGCAATTATGCAAGGACTCACGCGCAACCCTCTCGCTGACCCCGGTATTTTAGGGATTAACTC CGGGGCAGCTTTGGCCGTTGTGGGGTCAGTATTTTGGTTAGGTACAACGTCTCTTAGGGTTTATGCAGGGTTTGCTTTGC TGGGCGCTGCAATCGCTGCCATTACCGTCTATGCTCTCGGTTCTTTAGGGCGAGGTGGACTGACACCGCTTAATTTGACG ATTGCAGGGGCTGCATTTTCGGCTTTGGTGACCTCCCTGACGACCGGGATTCTGATCCTCAGTCAACGAACCTTGGAAGA GATCCGGTTTTGGCTCGCGGGTTCTGTCGCAGGGCGGGATTTAGACTTAGTGGTTCAGGTTTTACCCTATCTGGCATTAG GCATGGTGATTGCCCTAGTTATGGGTAAACAGCTCACGACTCTCAGCCTAGGGGAAGATATTGCTCAAGGTTTAGGTCAA AAGACCGCCTGGGTCAAAGGAATTGCGGCAGTGAGCATTATTTTGCTGGCAGGTGGCTCTGTTGCGATCGCAGGTCCGAT CGGGTTTGTGGGCCTAATCGTTCCCCATATCGTTCGGTTCTGGGTGGGGGTCGATTATCGCTGGATTCTGCCCTATGCCG CCATTGTCGGAGCAATCCTATTGCTGATCGCTGATATTGGAGCACGGTTAGTGATTCAGCCCCAAGAGCTGCCAGTGGGG TTAGTCATGCCCTTGTTGGGAGCCCCCTTCTTTATCTATCTCACCCGCTGGCAGGTGCGACGATGA
Upstream 100 bases:
>100_bases CTAAAAGGCTTGTAAAACAAGCTTTTCTCATGATTCCTAGATAGAAATATTAGGCGCATGCATGTAGTATTACTAAGATG GATTATCAATAAATTGGCCA
Downstream 100 bases:
>100_bases AGCAATGGTTAGTAGTTCGTCCCCCGCAGGTTCCGATCTCCTTTCATCTAGACCGACGGGTTCCCAGGATAATGGTAGGC CTGCTCCTGGCGACGTTGGT
Product: iron ABC transporter permease
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSTVPARRQLLQSPVLLGLGLVLGIGLLLVCFMASVGLGVADISLKTVYQALTDFDGSTDQLIIRTVRIPRSITALLVGS AVAMAGAIMQGLTRNPLADPGILGINSGAALAVVGSVFWLGTTSLRVYAGFALLGAAIAAITVYALGSLGRGGLTPLNLT IAGAAFSALVTSLTTGILILSQRTLEEIRFWLAGSVAGRDLDLVVQVLPYLALGMVIALVMGKQLTTLSLGEDIAQGLGQ KTAWVKGIAAVSIILLAGGSVAIAGPIGFVGLIVPHIVRFWVGVDYRWILPYAAIVGAILLLIADIGARLVIQPQELPVG LVMPLLGAPFFIYLTRWQVRR
Sequences:
>Translated_341_residues MSTVPARRQLLQSPVLLGLGLVLGIGLLLVCFMASVGLGVADISLKTVYQALTDFDGSTDQLIIRTVRIPRSITALLVGS AVAMAGAIMQGLTRNPLADPGILGINSGAALAVVGSVFWLGTTSLRVYAGFALLGAAIAAITVYALGSLGRGGLTPLNLT IAGAAFSALVTSLTTGILILSQRTLEEIRFWLAGSVAGRDLDLVVQVLPYLALGMVIALVMGKQLTTLSLGEDIAQGLGQ KTAWVKGIAAVSIILLAGGSVAIAGPIGFVGLIVPHIVRFWVGVDYRWILPYAAIVGAILLLIADIGARLVIQPQELPVG LVMPLLGAPFFIYLTRWQVRR >Mature_340_residues STVPARRQLLQSPVLLGLGLVLGIGLLLVCFMASVGLGVADISLKTVYQALTDFDGSTDQLIIRTVRIPRSITALLVGSA VAMAGAIMQGLTRNPLADPGILGINSGAALAVVGSVFWLGTTSLRVYAGFALLGAAIAAITVYALGSLGRGGLTPLNLTI AGAAFSALVTSLTTGILILSQRTLEEIRFWLAGSVAGRDLDLVVQVLPYLALGMVIALVMGKQLTTLSLGEDIAQGLGQK TAWVKGIAAVSIILLAGGSVAIAGPIGFVGLIVPHIVRFWVGVDYRWILPYAAIVGAILLLIADIGARLVIQPQELPVGL VMPLLGAPFFIYLTRWQVRR
Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen (Probable) [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786805, Length=304, Percent_Identity=41.7763157894737, Blast_Score=191, Evalue=6e-50, Organism=Escherichia coli, GI1790740, Length=305, Percent_Identity=34.4262295081967, Blast_Score=154, Evalue=9e-39, Organism=Escherichia coli, GI1790741, Length=281, Percent_Identity=36.6548042704626, Blast_Score=154, Evalue=9e-39, Organism=Escherichia coli, GI1788004, Length=285, Percent_Identity=35.7894736842105, Blast_Score=124, Evalue=9e-30, Organism=Escherichia coli, GI1786347, Length=276, Percent_Identity=32.9710144927536, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1786804, Length=321, Percent_Identity=32.398753894081, Blast_Score=96, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 35495; Mature: 35364
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVPARRQLLQSPVLLGLGLVLGIGLLLVCFMASVGLGVADISLKTVYQALTDFDGSTD CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC QLIIRTVRIPRSITALLVGSAVAMAGAIMQGLTRNPLADPGILGINSGAALAVVGSVFWL CEEHEEHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHH GTTSLRVYAGFALLGAAIAAITVYALGSLGRGGLTPLNLTIAGAAFSALVTSLTTGILIL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH SQRTLEEIRFWLAGSVAGRDLDLVVQVLPYLALGMVIALVMGKQLTTLSLGEDIAQGLGQ HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC KTAWVKGIAAVSIILLAGGSVAIAGPIGFVGLIVPHIVRFWVGVDYRWILPYAAIVGAIL HHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LLIADIGARLVIQPQELPVGLVMPLLGAPFFIYLTRWQVRR HHHHHCCCEEEEECCCCCHHHHHHHHCCCCEEHHHHHHCCC >Mature Secondary Structure STVPARRQLLQSPVLLGLGLVLGIGLLLVCFMASVGLGVADISLKTVYQALTDFDGSTD CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC QLIIRTVRIPRSITALLVGSAVAMAGAIMQGLTRNPLADPGILGINSGAALAVVGSVFWL CEEHEEHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHH GTTSLRVYAGFALLGAAIAAITVYALGSLGRGGLTPLNLTIAGAAFSALVTSLTTGILIL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH SQRTLEEIRFWLAGSVAGRDLDLVVQVLPYLALGMVIALVMGKQLTTLSLGEDIAQGLGQ HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC KTAWVKGIAAVSIILLAGGSVAIAGPIGFVGLIVPHIVRFWVGVDYRWILPYAAIVGAIL HHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LLIADIGARLVIQPQELPVGLVMPLLGAPFFIYLTRWQVRR HHHHHCCCEEEEECCCCCHHHHHHHHCCCCEEHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]