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The map label for this gene is yfhP [C]

Identifier: 158336452

GI number: 158336452

Start: 3348253

End: 3348696

Strand: Direct

Name: yfhP [C]

Synonym: AM1_3316

Alternate gene names: 158336452

Gene position: 3348253-3348696 (Clockwise)

Preceding gene: 158336446

Following gene: 158336457

Centisome position: 51.48

GC content: 51.58

Gene sequence:

>444_bases
GTGAAGTTAACGACACGGGGACACTATAGTGTAAAGGCGTTGCTGGATTTGAGTTTGCAGCCCAATTTTGGACCGGCATC
GGTGAATGTGATCTCACAACGGCAGTCTCTCCCAGCCCCCTATTTGGAAAAGCTGCTGATAGAGTTGCGACAAGCGGGTT
TGGTGCGGTCGGTTCGGGGCTCGAAAGGAGGCTATCAGTTGGCCCGTCCCCCGGTCCAAATTTCCTTAGGGCACATTTTG
GAAGCGGTTGGAGAAACGGTTGAACCTTTTACGGAAAAGTCGGCTGCAACCCAGCAGGCTGAAGATTGGGTCACCCTGAC
CCTTTGGAAACGCCTACACCAAAAACTCAAGGAATCCCTCTACAGTATTTCCTTAGAAGATCTTTATTTTGATGCCCGCA
GTTGGCAAGCGGCACAGGGGGCTGAGACGAGTTTTGTCGTCTAA

Upstream 100 bases:

>100_bases
AACAGGGTTGCCCATCAACTTAACAGTTTAGGCTGAGACGTTACCCCAAGCGAATTTTTGGCGGAATTCCTGTCGATAGA
TTGATAACACGGAGATCAGG

Downstream 100 bases:

>100_bases
AGATTGTCTGTTAAGTTATCTACTGTGTTCGTCAAATTGCGTATTGCAGAGATTTAATTAGCCTGAAGAATCTGGGGCGA
CTGTTGTTGAAGAATCTGGA

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MKLTTRGHYSVKALLDLSLQPNFGPASVNVISQRQSLPAPYLEKLLIELRQAGLVRSVRGSKGGYQLARPPVQISLGHIL
EAVGETVEPFTEKSAATQQAEDWVTLTLWKRLHQKLKESLYSISLEDLYFDARSWQAAQGAETSFVV

Sequences:

>Translated_147_residues
MKLTTRGHYSVKALLDLSLQPNFGPASVNVISQRQSLPAPYLEKLLIELRQAGLVRSVRGSKGGYQLARPPVQISLGHIL
EAVGETVEPFTEKSAATQQAEDWVTLTLWKRLHQKLKESLYSISLEDLYFDARSWQAAQGAETSFVV
>Mature_147_residues
MKLTTRGHYSVKALLDLSLQPNFGPASVNVISQRQSLPAPYLEKLLIELRQAGLVRSVRGSKGGYQLARPPVQISLGHIL
EAVGETVEPFTEKSAATQQAEDWVTLTLWKRLHQKLKESLYSISLEDLYFDARSWQAAQGAETSFVV

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=129, Percent_Identity=37.984496124031, Blast_Score=88, Evalue=2e-19,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16366; Mature: 16366

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTTRGHYSVKALLDLSLQPNFGPASVNVISQRQSLPAPYLEKLLIELRQAGLVRSVRG
CCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
SKGGYQLARPPVQISLGHILEAVGETVEPFTEKSAATQQAEDWVTLTLWKRLHQKLKESL
CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSISLEDLYFDARSWQAAQGAETSFVV
HHCCHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLTTRGHYSVKALLDLSLQPNFGPASVNVISQRQSLPAPYLEKLLIELRQAGLVRSVRG
CCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
SKGGYQLARPPVQISLGHILEAVGETVEPFTEKSAATQQAEDWVTLTLWKRLHQKLKESL
CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSISLEDLYFDARSWQAAQGAETSFVV
HHCCHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]