Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158336433

Identifier: 158336433

GI number: 158336433

Start: 3325450

End: 3325959

Strand: Direct

Name: 158336433

Synonym: AM1_3297

Alternate gene names: NA

Gene position: 3325450-3325959 (Clockwise)

Preceding gene: 158336432

Following gene: 158336434

Centisome position: 51.13

GC content: 44.9

Gene sequence:

>510_bases
ATGCTTGGGTTGCAACCTCAAAGACTAAGTAAACAATATTGGCAGTCCAGCTTTCTCATACTTTCGATGTTGCTAGGTTT
AGTCTCTGATCAGGTTCAGGCTCAGCAGCCTACTAGAGTGCGCTATTCGACTCAAGGTTGTGGTGATTTTCTAGCGAGGT
GGGATAAAAAACCAGCGGCTTTGAAGTTTGCTGGCTGTGAAACAGGAGAAATGCAGCAGGTTGTTGTTCTTACTTCTCCC
TATACTGTCCAGGGCACTGATGCCATCGAAATAGAGAAATTTTTGCAACGTGAATTTGGCATGGCTCCCCTTCGATTCCT
CTGTTGTGGTTGGGAAGTTAGTCCTGCCAAAGGTACAGTAGCTCCTCAGTATGGACAATATATTGATTCGGAGGGAGCTA
AGTTTGAAGTCTCTATGTTTTCTGGAGAAACCCTATCGAATGGCCGTGAGGCTTGGCATCAGATCCCTGAATTCCGTATT
AAGGTAGAGACATATTTGGGAGAGTTTTGA

Upstream 100 bases:

>100_bases
CGATTGCCTAAAATGCGAGTGCTAGGATGGCGGCGAAGAGATTCAGCTAATATGGGCTGGATCAATCGTTTGCTTCACTC
AGAAAGATAAAACAGTGGCT

Downstream 100 bases:

>100_bases
GTCTGATTGTCGCGGCTTAATATTGCCTGATTCAGGAGAGCGATGGAATTTGAAAAAGAGCAAGAAATTGCGAATTTGCG
GACTTTGAATTTGACGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MLGLQPQRLSKQYWQSSFLILSMLLGLVSDQVQAQQPTRVRYSTQGCGDFLARWDKKPAALKFAGCETGEMQQVVVLTSP
YTVQGTDAIEIEKFLQREFGMAPLRFLCCGWEVSPAKGTVAPQYGQYIDSEGAKFEVSMFSGETLSNGREAWHQIPEFRI
KVETYLGEF

Sequences:

>Translated_169_residues
MLGLQPQRLSKQYWQSSFLILSMLLGLVSDQVQAQQPTRVRYSTQGCGDFLARWDKKPAALKFAGCETGEMQQVVVLTSP
YTVQGTDAIEIEKFLQREFGMAPLRFLCCGWEVSPAKGTVAPQYGQYIDSEGAKFEVSMFSGETLSNGREAWHQIPEFRI
KVETYLGEF
>Mature_169_residues
MLGLQPQRLSKQYWQSSFLILSMLLGLVSDQVQAQQPTRVRYSTQGCGDFLARWDKKPAALKFAGCETGEMQQVVVLTSP
YTVQGTDAIEIEKFLQREFGMAPLRFLCCGWEVSPAKGTVAPQYGQYIDSEGAKFEVSMFSGETLSNGREAWHQIPEFRI
KVETYLGEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19062; Mature: 19062

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGLQPQRLSKQYWQSSFLILSMLLGLVSDQVQAQQPTRVRYSTQGCGDFLARWDKKPAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCCCCE
LKFAGCETGEMQQVVVLTSPYTVQGTDAIEIEKFLQREFGMAPLRFLCCGWEVSPAKGTV
EEECCCCCCCCEEEEEEECCEEECCCCHHHHHHHHHHHCCCCCHHHHEECCEECCCCCCC
APQYGQYIDSEGAKFEVSMFSGETLSNGREAWHQIPEFRIKVETYLGEF
CCCHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHCCHHEEEHHHHCCCC
>Mature Secondary Structure
MLGLQPQRLSKQYWQSSFLILSMLLGLVSDQVQAQQPTRVRYSTQGCGDFLARWDKKPAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCCCCE
LKFAGCETGEMQQVVVLTSPYTVQGTDAIEIEKFLQREFGMAPLRFLCCGWEVSPAKGTV
EEECCCCCCCCEEEEEEECCEEECCCCHHHHHHHHHHHCCCCCHHHHEECCEECCCCCCC
APQYGQYIDSEGAKFEVSMFSGETLSNGREAWHQIPEFRIKVETYLGEF
CCCHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHCCHHEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA