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The map label for this gene is degP [C]

Identifier: 158336407

GI number: 158336407

Start: 3305527

End: 3306876

Strand: Reverse

Name: degP [C]

Synonym: AM1_3269

Alternate gene names: 158336407

Gene position: 3306876-3305527 (Counterclockwise)

Preceding gene: 158336409

Following gene: 158336405

Centisome position: 50.85

GC content: 45.26

Gene sequence:

>1350_bases
ATGAATTTCGCTCCAAAATCTCTGTCTATCGTGTTTGGAATAGCAGCAACCACAGCTCTTATTCAGCCGCAGCTTGCTTC
TGCTCTTCCCCTATCTGAGCTTGAGCGTATCGCTAAGAACATTACGGTTCGCATTGATAGTCAAACCCCAGGTTCAGGGA
TCTTGATTAAACGGAGTGGTGATACCTATACGGTTCTCACTGCTGCCCATGTCGTGGCGACAGAAGATGAATACGACATC
ATTACACCAGACGATCGACGTTATGCCATCGACTACGCAACTGTGCGTCATTTTCCCGAAGTTGATCTAGCAATTTTAGA
GTTTACGAGCAATCGCACTTATCAGGTGGCGACCATCGGCGACTCCAGACAAGCCAAATATGGCAATGCTGTTTTTGTCA
GTGGTTTTCCTGCCAACTTAGAGGCCAATCGTGAAGCTAATTTGCGTTTCACAAGTGGTGTTATTGCAGCTCATGCAGCA
AGTCCACTAACCGATGGTTATGCGATCGCATATTCCAACAACACGTTCCAAGGCATGAGTGGCGGGTCAGTGCTAAATCA
AACCGGCCAACTCATCGGCATTCATGGACAAAGTCTTACCCCCTTAGCTGAAAGTAGGGGCATTCACCCACAGACTCAAT
TAAAAATTGGTGCCAATTTAGCCATCCCGACTCATATTTTCTTAAATAAGATTACCAAAGTGGCACCAAACCTCGGTTTT
CAATCTGTTGCTGTTTCAATCCCCAAGCAACCCTCCACAGCAGATGATTATTTTCTTCAAGCTGTAATGAAACAAAATGT
GCAAGGTGATTTACCAGGTGCTATGGCCGCTCTCGATGAGGCAATTCGCCTCAATCCTGGATATAGCCAGGCCTTTTTAA
CACGAGGTCGAGTCAACCATGCTCGCGGAAATCTGACACAAGCTTTGGCAGATTTTAATCAATCTATTCGGATTCATCCC
AAAGGTTATGTGGGTTATCTCCATCGTGCCATTGTTCATGGCCAGCTAAAGGATACTCAACAAGCACTTGCCGACTACGA
CCAAGTGATTCGCCTGAATCCAAATGCAGCAGTGAACTTAGTGACCTATTACAATCGAGCAAGTCTGCGTGCCCAAGCTG
GAGATTATCAAGGTGCGATTGATGATTTAAACCAAGCTATCCAGATTCGAGAAACTCCAAAAACTTATGCAAAACGGGCA
ACGGTTCAATGGCAGTTACGAAATCGGGCAGGGACTATTGCCGATTTTCAAAAAGCTGCAGAACTATATCAGGCCCAAGG
AGACATTGCTAGCTATCAGAGCGTGCTCAAAGTCTTGAAACAAATTAATCGTACAAACAGTAATCGCTAA

Upstream 100 bases:

>100_bases
TCGTCTATGGGATGCTGGACAAGCACATAGGCATCTCGCGTTGGCAACAATAACAATATCTTGCAACTGTTATGATGAGC
GTTGTTGTTCAATCCTTTCG

Downstream 100 bases:

>100_bases
CTGATGAGGCGAGGTTAGCAACGATTTCCGCTGCGGGAGGGAATGCTGGGATCTCGTCTTAGGCTTCGATAGCAACGATT
CCTTACTGGGAAAACGACAA

Product: TPR domain-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Peptidase; TPR Repeat-Containing Serine/Threonin Protein Kinase; Tetratricopeptide Tpr_1 Repeat-Containing Protein; GUN4-Like; Tetratricopeptide Repeat-Containing Protein; Trypsin Domain Protein; WD-40 Repeat-Containing Protein; Protease; O-Linked GlcNAc Transferase; Trypsin-Like Serine Protease; Tetratricopeptide Repeat Family Protein; DNAJ Domain Protein; Tetratricopeptide Repeat Family; Peptidase M; TPR Domain Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; O-Linked GlcNAc Transferase Protein; Serine Protease; Tetratricopeptide Domain-Containing Protein; TPR Repeat- And Protein Kinase Domain-Containing Protein; Pentapeptide Repeat-Containing Serine/Threonine Kinase; Mitochondrial Outer Membrane; Tfp Pilus Assembly Protein PilF; TPR Repeat-Containing Protein Kinase; Periplasmic Protein

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MNFAPKSLSIVFGIAATTALIQPQLASALPLSELERIAKNITVRIDSQTPGSGILIKRSGDTYTVLTAAHVVATEDEYDI
ITPDDRRYAIDYATVRHFPEVDLAILEFTSNRTYQVATIGDSRQAKYGNAVFVSGFPANLEANREANLRFTSGVIAAHAA
SPLTDGYAIAYSNNTFQGMSGGSVLNQTGQLIGIHGQSLTPLAESRGIHPQTQLKIGANLAIPTHIFLNKITKVAPNLGF
QSVAVSIPKQPSTADDYFLQAVMKQNVQGDLPGAMAALDEAIRLNPGYSQAFLTRGRVNHARGNLTQALADFNQSIRIHP
KGYVGYLHRAIVHGQLKDTQQALADYDQVIRLNPNAAVNLVTYYNRASLRAQAGDYQGAIDDLNQAIQIRETPKTYAKRA
TVQWQLRNRAGTIADFQKAAELYQAQGDIASYQSVLKVLKQINRTNSNR

Sequences:

>Translated_449_residues
MNFAPKSLSIVFGIAATTALIQPQLASALPLSELERIAKNITVRIDSQTPGSGILIKRSGDTYTVLTAAHVVATEDEYDI
ITPDDRRYAIDYATVRHFPEVDLAILEFTSNRTYQVATIGDSRQAKYGNAVFVSGFPANLEANREANLRFTSGVIAAHAA
SPLTDGYAIAYSNNTFQGMSGGSVLNQTGQLIGIHGQSLTPLAESRGIHPQTQLKIGANLAIPTHIFLNKITKVAPNLGF
QSVAVSIPKQPSTADDYFLQAVMKQNVQGDLPGAMAALDEAIRLNPGYSQAFLTRGRVNHARGNLTQALADFNQSIRIHP
KGYVGYLHRAIVHGQLKDTQQALADYDQVIRLNPNAAVNLVTYYNRASLRAQAGDYQGAIDDLNQAIQIRETPKTYAKRA
TVQWQLRNRAGTIADFQKAAELYQAQGDIASYQSVLKVLKQINRTNSNR
>Mature_449_residues
MNFAPKSLSIVFGIAATTALIQPQLASALPLSELERIAKNITVRIDSQTPGSGILIKRSGDTYTVLTAAHVVATEDEYDI
ITPDDRRYAIDYATVRHFPEVDLAILEFTSNRTYQVATIGDSRQAKYGNAVFVSGFPANLEANREANLRFTSGVIAAHAA
SPLTDGYAIAYSNNTFQGMSGGSVLNQTGQLIGIHGQSLTPLAESRGIHPQTQLKIGANLAIPTHIFLNKITKVAPNLGF
QSVAVSIPKQPSTADDYFLQAVMKQNVQGDLPGAMAALDEAIRLNPGYSQAFLTRGRVNHARGNLTQALADFNQSIRIHP
KGYVGYLHRAIVHGQLKDTQQALADYDQVIRLNPNAAVNLVTYYNRASLRAQAGDYQGAIDDLNQAIQIRETPKTYAKRA
TVQWQLRNRAGTIADFQKAAELYQAQGDIASYQSVLKVLKQINRTNSNR

Specific function: Serine Protease That Is Required At High Temperature. Involved In The Degradation Of Damaged Proteins. It Can Degrade Icia, Ada, Casein And Globin. Shared Specificity With Degq. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.- [C]

Molecular weight: Translated: 48923; Mature: 48923

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFAPKSLSIVFGIAATTALIQPQLASALPLSELERIAKNITVRIDSQTPGSGILIKRSG
CCCCCCCEEEEEEHHHHHHHHCHHHHHCCCHHHHHHHHCCEEEEEECCCCCCCEEEEECC
DTYTVLTAAHVVATEDEYDIITPDDRRYAIDYATVRHFPEVDLAILEFTSNRTYQVATIG
CEEEEEEEEEEEECCCCCCEECCCCCEEEEEHHHHHCCCCCCEEEEEECCCCEEEEEECC
DSRQAKYGNAVFVSGFPANLEANREANLRFTSGVIAAHAASPLTDGYAIAYSNNTFQGMS
CCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCHHHHCCCCCCCCEEEEEECCCCCCCC
GGSVLNQTGQLIGIHGQSLTPLAESRGIHPQTQLKIGANLAIPTHIFLNKITKVAPNLGF
CCHHHHCCCCEEEECCCCCCCHHHHCCCCCCCEEEECCCEECHHHHHHHHHHHHCCCCCC
QSVAVSIPKQPSTADDYFLQAVMKQNVQGDLPGAMAALDEAIRLNPGYSQAFLTRGRVNH
CCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCH
ARGNLTQALADFNQSIRIHPKGYVGYLHRAIVHGQLKDTQQALADYDQVIRLNPNAAVNL
HCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCHHHHHHHHHCHHHEEEECCCCEEEE
VTYYNRASLRAQAGDYQGAIDDLNQAIQIRETPKTYAKRATVQWQLRNRAGTIADFQKAA
EEEECCCCEEECCCCCCCCHHHHHHHEEEECCCHHHHHHCEEEEEECCCCCCHHHHHHHH
ELYQAQGDIASYQSVLKVLKQINRTNSNR
HHHHHCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNFAPKSLSIVFGIAATTALIQPQLASALPLSELERIAKNITVRIDSQTPGSGILIKRSG
CCCCCCCEEEEEEHHHHHHHHCHHHHHCCCHHHHHHHHCCEEEEEECCCCCCCEEEEECC
DTYTVLTAAHVVATEDEYDIITPDDRRYAIDYATVRHFPEVDLAILEFTSNRTYQVATIG
CEEEEEEEEEEEECCCCCCEECCCCCEEEEEHHHHHCCCCCCEEEEEECCCCEEEEEECC
DSRQAKYGNAVFVSGFPANLEANREANLRFTSGVIAAHAASPLTDGYAIAYSNNTFQGMS
CCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCHHHHCCCCCCCCEEEEEECCCCCCCC
GGSVLNQTGQLIGIHGQSLTPLAESRGIHPQTQLKIGANLAIPTHIFLNKITKVAPNLGF
CCHHHHCCCCEEEECCCCCCCHHHHCCCCCCCEEEECCCEECHHHHHHHHHHHHCCCCCC
QSVAVSIPKQPSTADDYFLQAVMKQNVQGDLPGAMAALDEAIRLNPGYSQAFLTRGRVNH
CCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCH
ARGNLTQALADFNQSIRIHPKGYVGYLHRAIVHGQLKDTQQALADYDQVIRLNPNAAVNL
HCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCHHHHHHHHHCHHHEEEECCCCEEEE
VTYYNRASLRAQAGDYQGAIDDLNQAIQIRETPKTYAKRATVQWQLRNRAGTIADFQKAA
EEEECCCCEEECCCCCCCCHHHHHHHEEEECCCHHHHHHCEEEEEECCCCCCHHHHHHHH
ELYQAQGDIASYQSVLKVLKQINRTNSNR
HHHHHCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: Serine endopeptidases [C]

General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA