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The map label for this gene is hxuB [H]

Identifier: 158336404

GI number: 158336404

Start: 3299049

End: 3300725

Strand: Reverse

Name: hxuB [H]

Synonym: AM1_3266

Alternate gene names: 158336404

Gene position: 3300725-3299049 (Counterclockwise)

Preceding gene: 158336405

Following gene: 158336403

Centisome position: 50.75

GC content: 47.47

Gene sequence:

>1677_bases
ATGCAACTTTTTTCCTCAACGGCCCTTCTTCTCCTTTTCCTCGCCTCTCCTGCCTTGGCCCAACGCCCCGATCCAAACCA
AGACCGAATTCCTCAACCTTTGCCCAATCCTGAAGATGCCTTGCCAGCAGAGACTGACGATCCGATTACGCCTGCCCCGG
CTCCTCCGGCAGTGAAGACCCCCGACGGTCAGACAACCCTTTCTGTCACCCAAATCGACATCATTGGCAGTACTGTTTTC
ACTCCAACTGACTTTGAACCTCTCGTGACGCCTCTCGAAGGCCGAGACGTTTCTATCAATGAGCTACAAGCCCTGACTGA
AGCCATTACTCAGCTTTATTTCGATCAAGGCTATCTCACTTCTCGTGCAGTCCTTTCTGAACAAGAGATTACTGATGGCA
CAGTCCAAATCCAGGTCATAGAAGGGACTATTAGCGATATCCGCATTGAGGGTAATACACAAACCAAAACAGGCTACTTA
AAAAAGCGACTCGCTCTGGGTACTAGCACCCCTGCTCAACTAGGAGCCATTGAAGACCAGCTCCGACTGTTGCAGCTCGA
TCCCCTATTTGAAACCGTTAATGGCACTCTTGCCCCGGGTGAAAATGCTGGGGAAAGCATTCTCTCTGTGGTTGTTAAAG
AATCCAAACCTTTCAATTTTGACGTCTCTGTTGACAATTATTCACCCCCAAGTGTGGGAGGAGTCCGCACGGGTGTTGGG
GTTAGCTATCGCAATGCGACGGGTTGGGGTGATCAACTCAGCCTCAGCTATAGTCGATCTACCACGGGTGGATCGAATCT
TTACGATGTGGGTTACCGCATTCCCCTCAATGCTAAAGATGGCACCTTACAGCTTCGGGCTTTGATTACCGATAGTTCTC
AAACCCAAACGACCTTAGATTTTGATGGCAATTCTGAATTCTATGAAATTAGCTTCCGGCAACCGCTGATTCGTAATCCC
AGAGAAGAATTTGCCCTCTCCCTTGCGTTTGCCTACCGAGATGGGCAGACCTTTTTGTTTAATTCTCCCTTCCCTTTCGG
TATTGGCCCTGATGCCAATGGCATCAGCCGCACCAGCGTCTTCAAATTTGGTCAAGACTATATTAAACGCGATTCTACTG
GAGCTTGGGCTTTACAGTCACAATTTAGTTTAGGTACTGGGTTGTTCAATGCAACGAATAACACTGGGGCTATTCCAGAT
GGCCAATTCTTTAGCTGGTTAGGACAGGCTCAGCGGGTGCAGCGCTTAGGCAAGAACAATTTGTTGATTATGCAAGGAAG
TGCCCAGTTTAGTCCTGATAGTTTGTTGGCTTCAGAACAGTTCGTCATCGGGGGTGGGCAATCCGTGAGAGGCTTCCGTC
AAAATGTCCGTTCTGGGGATAATGGCTTGCGGTTTTCCATTGAAGATCGCATTACCCTTGTTCGCAATAAAAAAGAAAGT
CCAGTCATTCAGATTGCCCCCTTCTTAGATCTGGGTTACGTTTTTAACTCCAACAATAATCCTAATCTCATCTTTGGGGA
GCAATTTTTGATTAGCTCAGGCTTAGGTCTGCTTTTGGAGCCTGTTTCTGGACTCAATATTCGTCTTGATTATGCTGTGC
CATTTGTAGATTTGAGTGACCGAGGCAACAATGTTCAAGATGAAGGCTTTCACTTTAGTGTTAGATACAGCTACTAG

Upstream 100 bases:

>100_bases
CACACCATTCCCTATCTATACAACGTCGGTTTTAGTTTTCAGGTTTCAGGTTTAATCGAATCCCGTATTCAATCCTTCGT
TCCTATTGACGCATTTTCTT

Downstream 100 bases:

>100_bases
GGAATCTGTCAGTCTTGAGTAGCCCTATTGAAGAGGAGAATTGACCATTCAGACTCACTCATCAACGCTTTACGTAATGC
TGGCTTGCCTTTTATAAGCA

Product: polypeptide-transport-associated, ShlB-type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MQLFSSTALLLLFLASPALAQRPDPNQDRIPQPLPNPEDALPAETDDPITPAPAPPAVKTPDGQTTLSVTQIDIIGSTVF
TPTDFEPLVTPLEGRDVSINELQALTEAITQLYFDQGYLTSRAVLSEQEITDGTVQIQVIEGTISDIRIEGNTQTKTGYL
KKRLALGTSTPAQLGAIEDQLRLLQLDPLFETVNGTLAPGENAGESILSVVVKESKPFNFDVSVDNYSPPSVGGVRTGVG
VSYRNATGWGDQLSLSYSRSTTGGSNLYDVGYRIPLNAKDGTLQLRALITDSSQTQTTLDFDGNSEFYEISFRQPLIRNP
REEFALSLAFAYRDGQTFLFNSPFPFGIGPDANGISRTSVFKFGQDYIKRDSTGAWALQSQFSLGTGLFNATNNTGAIPD
GQFFSWLGQAQRVQRLGKNNLLIMQGSAQFSPDSLLASEQFVIGGGQSVRGFRQNVRSGDNGLRFSIEDRITLVRNKKES
PVIQIAPFLDLGYVFNSNNNPNLIFGEQFLISSGLGLLLEPVSGLNIRLDYAVPFVDLSDRGNNVQDEGFHFSVRYSY

Sequences:

>Translated_558_residues
MQLFSSTALLLLFLASPALAQRPDPNQDRIPQPLPNPEDALPAETDDPITPAPAPPAVKTPDGQTTLSVTQIDIIGSTVF
TPTDFEPLVTPLEGRDVSINELQALTEAITQLYFDQGYLTSRAVLSEQEITDGTVQIQVIEGTISDIRIEGNTQTKTGYL
KKRLALGTSTPAQLGAIEDQLRLLQLDPLFETVNGTLAPGENAGESILSVVVKESKPFNFDVSVDNYSPPSVGGVRTGVG
VSYRNATGWGDQLSLSYSRSTTGGSNLYDVGYRIPLNAKDGTLQLRALITDSSQTQTTLDFDGNSEFYEISFRQPLIRNP
REEFALSLAFAYRDGQTFLFNSPFPFGIGPDANGISRTSVFKFGQDYIKRDSTGAWALQSQFSLGTGLFNATNNTGAIPD
GQFFSWLGQAQRVQRLGKNNLLIMQGSAQFSPDSLLASEQFVIGGGQSVRGFRQNVRSGDNGLRFSIEDRITLVRNKKES
PVIQIAPFLDLGYVFNSNNNPNLIFGEQFLISSGLGLLLEPVSGLNIRLDYAVPFVDLSDRGNNVQDEGFHFSVRYSY
>Mature_558_residues
MQLFSSTALLLLFLASPALAQRPDPNQDRIPQPLPNPEDALPAETDDPITPAPAPPAVKTPDGQTTLSVTQIDIIGSTVF
TPTDFEPLVTPLEGRDVSINELQALTEAITQLYFDQGYLTSRAVLSEQEITDGTVQIQVIEGTISDIRIEGNTQTKTGYL
KKRLALGTSTPAQLGAIEDQLRLLQLDPLFETVNGTLAPGENAGESILSVVVKESKPFNFDVSVDNYSPPSVGGVRTGVG
VSYRNATGWGDQLSLSYSRSTTGGSNLYDVGYRIPLNAKDGTLQLRALITDSSQTQTTLDFDGNSEFYEISFRQPLIRNP
REEFALSLAFAYRDGQTFLFNSPFPFGIGPDANGISRTSVFKFGQDYIKRDSTGAWALQSQFSLGTGLFNATNNTGAIPD
GQFFSWLGQAQRVQRLGKNNLLIMQGSAQFSPDSLLASEQFVIGGGQSVRGFRQNVRSGDNGLRFSIEDRITLVRNKKES
PVIQIAPFLDLGYVFNSNNNPNLIFGEQFLISSGLGLLLEPVSGLNIRLDYAVPFVDLSDRGNNVQDEGFHFSVRYSY

Specific function: Probable member of a two partner secretion pathway (TPS) in which it mediates the secretion of huxA [H]

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tpsB (TC 1.B.20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013686 [H]

Pfam domain/function: PF08479 POTRA_2 [H]

EC number: NA

Molecular weight: Translated: 60845; Mature: 60845

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLFSSTALLLLFLASPALAQRPDPNQDRIPQPLPNPEDALPAETDDPITPAPAPPAVKT
CCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDGQTTLSVTQIDIIGSTVFTPTDFEPLVTPLEGRDVSINELQALTEAITQLYFDQGYLT
CCCCEEEEEEEEEEECCEEECCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCH
SRAVLSEQEITDGTVQIQVIEGTISDIRIEGNTQTKTGYLKKRLALGTSTPAQLGAIEDQ
HHHHHCCCCCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHCCHHHH
LRLLQLDPLFETVNGTLAPGENAGESILSVVVKESKPFNFDVSVDNYSPPSVGGVRTGVG
HEEEEECHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCC
VSYRNATGWGDQLSLSYSRSTTGGSNLYDVGYRIPLNAKDGTLQLRALITDSSQTQTTLD
EEECCCCCCCCEEEEEECCCCCCCCCEEECCEEEECCCCCCCEEEEEEEECCCCCEEEEE
FDGNSEFYEISFRQPLIRNPREEFALSLAFAYRDGQTFLFNSPFPFGIGPDANGISRTSV
ECCCCCEEEEEECCCHHHCCHHHHEEEEEEEEECCCEEEECCCCCCCCCCCCCCCCHHHH
FKFGQDYIKRDSTGAWALQSQFSLGTGLFNATNNTGAIPDGQFFSWLGQAQRVQRLGKNN
HHHHHHHHHCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
LLIMQGSAQFSPDSLLASEQFVIGGGQSVRGFRQNVRSGDNGLRFSIEDRITLVRNKKES
EEEEECCCCCCCHHHHCCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCC
PVIQIAPFLDLGYVFNSNNNPNLIFGEQFLISSGLGLLLEPVSGLNIRLDYAVPFVDLSD
CEEEEECCEEEEEEEECCCCCCEEECCHHHHHCCCCEEEECCCCCEEEEEEEEEEEEECC
RGNNVQDEGFHFSVRYSY
CCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MQLFSSTALLLLFLASPALAQRPDPNQDRIPQPLPNPEDALPAETDDPITPAPAPPAVKT
CCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDGQTTLSVTQIDIIGSTVFTPTDFEPLVTPLEGRDVSINELQALTEAITQLYFDQGYLT
CCCCEEEEEEEEEEECCEEECCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCH
SRAVLSEQEITDGTVQIQVIEGTISDIRIEGNTQTKTGYLKKRLALGTSTPAQLGAIEDQ
HHHHHCCCCCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHCCHHHH
LRLLQLDPLFETVNGTLAPGENAGESILSVVVKESKPFNFDVSVDNYSPPSVGGVRTGVG
HEEEEECHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCC
VSYRNATGWGDQLSLSYSRSTTGGSNLYDVGYRIPLNAKDGTLQLRALITDSSQTQTTLD
EEECCCCCCCCEEEEEECCCCCCCCCEEECCEEEECCCCCCCEEEEEEEECCCCCEEEEE
FDGNSEFYEISFRQPLIRNPREEFALSLAFAYRDGQTFLFNSPFPFGIGPDANGISRTSV
ECCCCCEEEEEECCCHHHCCHHHHEEEEEEEEECCCEEEECCCCCCCCCCCCCCCCHHHH
FKFGQDYIKRDSTGAWALQSQFSLGTGLFNATNNTGAIPDGQFFSWLGQAQRVQRLGKNN
HHHHHHHHHCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
LLIMQGSAQFSPDSLLASEQFVIGGGQSVRGFRQNVRSGDNGLRFSIEDRITLVRNKKES
EEEEECCCCCCCHHHHCCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCC
PVIQIAPFLDLGYVFNSNNNPNLIFGEQFLISSGLGLLLEPVSGLNIRLDYAVPFVDLSD
CEEEEECCEEEEEEEECCCCCCEEECCHHHHHCCCCEEEECCCCCEEEEEEEEEEEEECC
RGNNVQDEGFHFSVRYSY
CCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]