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The map label for this gene is 158336384

Identifier: 158336384

GI number: 158336384

Start: 3281554

End: 3282111

Strand: Reverse

Name: 158336384

Synonym: AM1_3246

Alternate gene names: NA

Gene position: 3282111-3281554 (Counterclockwise)

Preceding gene: 158336385

Following gene: 158336381

Centisome position: 50.47

GC content: 38.35

Gene sequence:

>558_bases
ATGCTAATACTTGAAAGTTCCGAAATCGAGCATTGTAGCTTATATCATAATATTGATGGAAATCAAAAGAAGTTAGCTGG
TGCTAGCTATCAAGATAGACTATATGTTCGTCAGTCAAATTTCTCCAAAAATCAACGACAAGAAGCCTTAGAATATTGTC
GAACGGCTTTTCTCGAATCTAAAGGTAATAGCTCGGTTTTACTAGTTGAGGATGAAACAGAATTCACTGCCTGGGTTGAG
GATAAGCAAGCGTCTCTTGCTCCTGAAAAAACTATTGACCGAATTACCTTAATTAATCTGGAAAAATTAGTCGCCAAGAT
GCGTACTGTCGGTGGCATCAAGATCAAGAATCGGGTTTATCGGCTAAAAGAGTATCCATATTGCTTTATTGGGTCTGAGG
CAGTTCGCTGGTTGATGCACAATGTTAAATTGTCGCGAGAAGAGGCGATTGGATTAGGGCAACGATTAATGGATGACAAA
TGGATCCATCATGTTTCTGATAGCCATCAATTTAAAGATGAAGAGTTATTTTATCGGTTCTACTGGGATGAAGATTAA

Upstream 100 bases:

>100_bases
TAGAATTTATATCGTTCTTAAATTATGTAATATCAGTATGGTCTTCTGGGAATAATATTTACAGAGACGTACTCATATTA
TTAGGACGTGATTAAACCAA

Downstream 100 bases:

>100_bases
TTTTTAGCCGTTCTGTTGCTGTAGACACTGACCTTGACTCAAAAAAGTGGAAATTCCCGTACCAATTAAAGCAATAGCGA
CAGGACACAAATTCAGATCA

Product: mechanosensitive ion channel

Products: NA

Alternate protein names: Transporter MscS Family; Mechanosensitive Ion Channel

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MLILESSEIEHCSLYHNIDGNQKKLAGASYQDRLYVRQSNFSKNQRQEALEYCRTAFLESKGNSSVLLVEDETEFTAWVE
DKQASLAPEKTIDRITLINLEKLVAKMRTVGGIKIKNRVYRLKEYPYCFIGSEAVRWLMHNVKLSREEAIGLGQRLMDDK
WIHHVSDSHQFKDEELFYRFYWDED

Sequences:

>Translated_185_residues
MLILESSEIEHCSLYHNIDGNQKKLAGASYQDRLYVRQSNFSKNQRQEALEYCRTAFLESKGNSSVLLVEDETEFTAWVE
DKQASLAPEKTIDRITLINLEKLVAKMRTVGGIKIKNRVYRLKEYPYCFIGSEAVRWLMHNVKLSREEAIGLGQRLMDDK
WIHHVSDSHQFKDEELFYRFYWDED
>Mature_185_residues
MLILESSEIEHCSLYHNIDGNQKKLAGASYQDRLYVRQSNFSKNQRQEALEYCRTAFLESKGNSSVLLVEDETEFTAWVE
DKQASLAPEKTIDRITLINLEKLVAKMRTVGGIKIKNRVYRLKEYPYCFIGSEAVRWLMHNVKLSREEAIGLGQRLMDDK
WIHHVSDSHQFKDEELFYRFYWDED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI47578115, Length=80, Percent_Identity=46.25, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI47578117, Length=80, Percent_Identity=46.25, Blast_Score=78, Evalue=4e-15,
Organism=Homo sapiens, GI34452732, Length=71, Percent_Identity=47.887323943662, Blast_Score=77, Evalue=8e-15,
Organism=Homo sapiens, GI189571664, Length=72, Percent_Identity=50, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI155030206, Length=72, Percent_Identity=43.0555555555556, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI155030204, Length=72, Percent_Identity=43.0555555555556, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21818; Mature: 21818

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50186 DEP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILESSEIEHCSLYHNIDGNQKKLAGASYQDRLYVRQSNFSKNQRQEALEYCRTAFLES
CEEECCCCCCEEEEEECCCCCCHHCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHC
KGNSSVLLVEDETEFTAWVEDKQASLAPEKTIDRITLINLEKLVAKMRTVGGIKIKNRVY
CCCCEEEEEECCCCEEEEECCCCCCCCCHHHHCEEEEECHHHHHHHHHHHCCEEEHHHHH
RLKEYPYCFIGSEAVRWLMHNVKLSREEAIGLGQRLMDDKWIHHVSDSHQFKDEELFYRF
HHHCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
YWDED
EECCC
>Mature Secondary Structure
MLILESSEIEHCSLYHNIDGNQKKLAGASYQDRLYVRQSNFSKNQRQEALEYCRTAFLES
CEEECCCCCCEEEEEECCCCCCHHCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHC
KGNSSVLLVEDETEFTAWVEDKQASLAPEKTIDRITLINLEKLVAKMRTVGGIKIKNRVY
CCCCEEEEEECCCCEEEEECCCCCCCCCHHHHCEEEEECHHHHHHHHHHHCCEEEHHHHH
RLKEYPYCFIGSEAVRWLMHNVKLSREEAIGLGQRLMDDKWIHHVSDSHQFKDEELFYRF
HHHCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
YWDED
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA