BacMap

Definition	Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession	NC_009925
Length	6,503,724

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The map label for this gene is nodG [H]

Identifier: 158336364

GI number: 158336364

Start: 3266416

End: 3267234

Strand: Reverse

Name: nodG [H]

Synonym: AM1_3226

Alternate gene names: 158336364

Gene position: 3267234-3266416 (Counterclockwise)

Preceding gene: 158336366

Following gene: 158336363

Centisome position: 50.24

GC content: 52.63

Gene sequence:

>819_bases
ATGACCGAGTTAAATAATGCCGTCGTTCTCTTAACCGGAGCAACCGGGGGATTTGGCCACGAGCTGACTCAACTGTTGTT
AGAGGCAGGCAGTCGAGTGATCCGCACGGATATCGATGGGGCCTTGCTGGAACAGCAGGCCGAAAAACTCAATCCAGACC
GCCACCCCGGAGAACTACTGCCCAGTTTTGTGGCCAACTTGGGCACGGCAGACGGGTGTGAGGATCTTTATCAGAACGTT
CAAGCCCTCAATCATCCTGTTGATATTTTGATTAACAATGCTGGCATTGCCCTCTATGGACGCATGGATGAGACCCCAAC
CGAACGCTGGGAACTAATGATGCAGCTCAATCTCTTGGCTCCCATGCGCTTGAGTAACCGGTTTGTAGCAGATATGATTA
CCCGCCGCCAGGGCCATATCGTGAATATTTCATCCGTCGCTGGCTGGATTGCTCCAACCGGGTTAACCGGCTATGCCGCC
AGTAAATTTGGGCTACGGGGGTACAGTGATGGGGTCCGCAGCGAGGTGAAAGACTTCAACATCAAAGTCACCACGGTCTA
CCCCTTTTTTAGCCGGACGCCGATTCTCAACTCAGATAGCTTTGGCTCCCTCGCTCAGGGGAAATCGGAACTGCCCCACT
GGATGACCACAGATCCCCATAAAATCATGCAAGCCACCCTTCAGGGCATTCAGCAGAACAAACCAGAAGTCTTTCCGGAT
CTGCCTGCCCGAGTCCTAACCCGGATCAAACGATATTGTCCGGGCCTGCTCCAATGGACCACGAACCAGATCAAACGACA
ATACCAAAAACCGTCTTAA

Upstream 100 bases:

>100_bases
GAGTAGGGGTAGGCCCCCCGATCATAAAAGTGAATAGACAAGAGGTCCCTGACATCCATACATCTTTTACAATTTGATCA
CAGTAACCGAAGGTCTAGCC

Downstream 100 bases:

>100_bases
CGCAGTTATTCACTCGAAAATCCGTGCAAACAACCTCCGAAAAATATCTAATTATTGGTGCTGGCTACGCAGGCTTGGGA
ATGGCTCAGGCTCTAAAAGA

Product: short chain dehydrogenase/reductase family oxidoreductase

Products: (3R)-hydroxyacyl-[acyl-carrier-protein]; NADP; NADPH; Proton; beta-ketoacyl-ACP [C]

Alternate protein names: Host-specificity of nodulation protein C [H]

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MTELNNAVVLLTGATGGFGHELTQLLLEAGSRVIRTDIDGALLEQQAEKLNPDRHPGELLPSFVANLGTADGCEDLYQNV
QALNHPVDILINNAGIALYGRMDETPTERWELMMQLNLLAPMRLSNRFVADMITRRQGHIVNISSVAGWIAPTGLTGYAA
SKFGLRGYSDGVRSEVKDFNIKVTTVYPFFSRTPILNSDSFGSLAQGKSELPHWMTTDPHKIMQATLQGIQQNKPEVFPD
LPARVLTRIKRYCPGLLQWTTNQIKRQYQKPS

Sequences:

>Translated_272_residues
MTELNNAVVLLTGATGGFGHELTQLLLEAGSRVIRTDIDGALLEQQAEKLNPDRHPGELLPSFVANLGTADGCEDLYQNV
QALNHPVDILINNAGIALYGRMDETPTERWELMMQLNLLAPMRLSNRFVADMITRRQGHIVNISSVAGWIAPTGLTGYAA
SKFGLRGYSDGVRSEVKDFNIKVTTVYPFFSRTPILNSDSFGSLAQGKSELPHWMTTDPHKIMQATLQGIQQNKPEVFPD
LPARVLTRIKRYCPGLLQWTTNQIKRQYQKPS
>Mature_271_residues
TELNNAVVLLTGATGGFGHELTQLLLEAGSRVIRTDIDGALLEQQAEKLNPDRHPGELLPSFVANLGTADGCEDLYQNVQ
ALNHPVDILINNAGIALYGRMDETPTERWELMMQLNLLAPMRLSNRFVADMITRRQGHIVNISSVAGWIAPTGLTGYAAS
KFGLRGYSDGVRSEVKDFNIKVTTVYPFFSRTPILNSDSFGSLAQGKSELPHWMTTDPHKIMQATLQGIQQNKPEVFPDL
PARVLTRIKRYCPGLLQWTTNQIKRQYQKPS

Specific function: Proposed to modify Nod factor fatty acyl chain [H]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=273, Percent_Identity=29.6703296703297, Blast_Score=109, Evalue=2e-24,
Organism=Homo sapiens, GI157739938, Length=247, Percent_Identity=26.7206477732794, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI4503817, Length=121, Percent_Identity=36.3636363636364, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI40807363, Length=251, Percent_Identity=28.6852589641434, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI7706318, Length=274, Percent_Identity=25.9124087591241, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI109715829, Length=194, Percent_Identity=27.319587628866, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI44680136, Length=231, Percent_Identity=29.004329004329, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI44680133, Length=231, Percent_Identity=29.004329004329, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI17738292, Length=231, Percent_Identity=29.004329004329, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI142976729, Length=255, Percent_Identity=26.6666666666667, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI32483357, Length=239, Percent_Identity=25.9414225941423, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI50726952, Length=202, Percent_Identity=30.6930693069307, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI210032110, Length=253, Percent_Identity=24.1106719367589, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI7657478, Length=220, Percent_Identity=30.4545454545455, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI150247226, Length=223, Percent_Identity=27.3542600896861, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI40254992, Length=192, Percent_Identity=28.6458333333333, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI22507405, Length=203, Percent_Identity=28.0788177339901, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI126723191, Length=195, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI19743808, Length=218, Percent_Identity=28.8990825688073, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI15277342, Length=198, Percent_Identity=26.7676767676768, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI25282469, Length=171, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4504505, Length=188, Percent_Identity=25, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1787335, Length=188, Percent_Identity=31.3829787234043, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787820, Length=182, Percent_Identity=29.1208791208791, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790717, Length=223, Percent_Identity=25.1121076233184, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI87082100, Length=199, Percent_Identity=26.1306532663317, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1786701, Length=266, Percent_Identity=25.5639097744361, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87082160, Length=206, Percent_Identity=23.7864077669903, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1787526, Length=199, Percent_Identity=27.6381909547739, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI25147288, Length=195, Percent_Identity=28.7179487179487, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17564282, Length=194, Percent_Identity=30.4123711340206, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17567345, Length=191, Percent_Identity=26.1780104712042, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115534660, Length=200, Percent_Identity=28, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17555706, Length=195, Percent_Identity=26.6666666666667, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI193203117, Length=198, Percent_Identity=28.2828282828283, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI193203115, Length=192, Percent_Identity=29.1666666666667, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17508895, Length=193, Percent_Identity=29.0155440414508, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI32563809, Length=207, Percent_Identity=25.6038647342995, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17507613, Length=207, Percent_Identity=25.6038647342995, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17560150, Length=191, Percent_Identity=27.7486910994764, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=193, Percent_Identity=26.9430051813472, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=203, Percent_Identity=26.6009852216749, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17531453, Length=200, Percent_Identity=29.5, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=232, Percent_Identity=28.448275862069, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17562910, Length=236, Percent_Identity=24.5762711864407, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI72000259, Length=193, Percent_Identity=28.4974093264249, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71997402, Length=187, Percent_Identity=31.5508021390374, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17562908, Length=193, Percent_Identity=25.3886010362694, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17557780, Length=204, Percent_Identity=24.5098039215686, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6320089, Length=163, Percent_Identity=30.6748466257669, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6323882, Length=194, Percent_Identity=28.3505154639175, Blast_Score=67, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6322861, Length=193, Percent_Identity=26.9430051813472, Blast_Score=62, Evalue=7e-11,
Organism=Drosophila melanogaster, GI21358495, Length=267, Percent_Identity=30.3370786516854, Blast_Score=117, Evalue=9e-27,
Organism=Drosophila melanogaster, GI24640492, Length=197, Percent_Identity=27.9187817258883, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI281364892, Length=240, Percent_Identity=25, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21355631, Length=195, Percent_Identity=24.1025641025641, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI221510726, Length=260, Percent_Identity=26.9230769230769, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI116007236, Length=235, Percent_Identity=27.6595744680851, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI28571387, Length=257, Percent_Identity=27.2373540856031, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24651139, Length=191, Percent_Identity=27.2251308900524, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI116007238, Length=192, Percent_Identity=29.1666666666667, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24639444, Length=196, Percent_Identity=23.9795918367347, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI23397609, Length=196, Percent_Identity=27.5510204081633, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24649181, Length=195, Percent_Identity=29.7435897435897, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI18859837, Length=190, Percent_Identity=27.8947368421053, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.1.1.100 [C]

Molecular weight: Translated: 30232; Mature: 30101

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELNNAVVLLTGATGGFGHELTQLLLEAGSRVIRTDIDGALLEQQAEKLNPDRHPGELL
CCCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHCCCCCCCHHHH
PSFVANLGTADGCEDLYQNVQALNHPVDILINNAGIALYGRMDETPTERWELMMQLNLLA
HHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHC
PMRLSNRFVADMITRRQGHIVNISSVAGWIAPTGLTGYAASKFGLRGYSDGVRSEVKDFN
CHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHCC
IKVTTVYPFFSRTPILNSDSFGSLAQGKSELPHWMTTDPHKIMQATLQGIQQNKPEVFPD
EEEEEEECCCCCCCCCCCCCCCCHHCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
LPARVLTRIKRYCPGLLQWTTNQIKRQYQKPS
CHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TELNNAVVLLTGATGGFGHELTQLLLEAGSRVIRTDIDGALLEQQAEKLNPDRHPGELL
CCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHCCCCCCCHHHH
PSFVANLGTADGCEDLYQNVQALNHPVDILINNAGIALYGRMDETPTERWELMMQLNLLA
HHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHC
PMRLSNRFVADMITRRQGHIVNISSVAGWIAPTGLTGYAASKFGLRGYSDGVRSEVKDFN
CHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHCC
IKVTTVYPFFSRTPILNSDSFGSLAQGKSELPHWMTTDPHKIMQATLQGIQQNKPEVFPD
EEEEEEECCCCCCCCCCCCCCCCHHCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
LPARVLTRIKRYCPGLLQWTTNQIKRQYQKPS
CHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NADPH [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Oxoacyl-[acyl-carrier-protein]; NADPH; D-3-hydroxy-acyl-ACP; NADP [C]

Specific reaction: Oxoacyl-[acyl-carrier-protein] + NADPH = (3R)-hydroxyacyl-[acyl-carrier-protein] + NADP+ D-3-hydroxy-acyl-ACP + NADP = NADPH + Proton + beta-ketoacyl-ACP [C]

General reaction: Redox reaction [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3020515; 11481432 [H]