| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158336358
Identifier: 158336358
GI number: 158336358
Start: 3258431
End: 3259297
Strand: Direct
Name: 158336358
Synonym: AM1_3220
Alternate gene names: NA
Gene position: 3258431-3259297 (Clockwise)
Preceding gene: 158336357
Following gene: 158336359
Centisome position: 50.1
GC content: 49.02
Gene sequence:
>867_bases TTGAATTCTAACCATCAAATAACCTTCCATGTTTCTTCAACCCAAGTCTTTGCATGTTGTCCAGTCTGCAATCAAATCAC CCACCGCGTCCACAGTCGTTATGAGCGAACCCTGAGAGACCTTCCCTGTGTGGATTTCTGCCTGACCATTCTGCTTCAAG TTTGCAAGTTCTTTTGCCGTAACGAGGCTTGCAAACGCTGCATCTTTACTGAGCGATTGCCCAAGGTTGCTGTTCCTTGG GCCAGAAAGACTATTCGGTTTGCTGAACACCTTACCTCGATTGGCCTAGCCCTTGGGGGTGCCGCAGCAGCGAGGCTGAG CTATCAGATCAATTATGGGAGTAGTCGCAATACGATGTTACGCTCTATTGCCAAGCTAGAGCCTCCCCCTGCCCCAACCC CTAAGATTCTAGGGGTAGATGATTTTGCCTTTCAGCGTGGCCATCACTATGGCACGATTCTGGTGGACTTAGAACACCAT CGGACTATTGCCCTCCTACCAGATCGTGATGCAAAAACTTTAGTCGCTTGGTTGGAAGAACACCCTGGTGTTGAAATCCT TTCTCGTGACCGCTCCAAGACCTACAAGTCTGCCATAAGTGAAGGTGCGCCCAATGCCATTCAGGTCGCAGATCGCTTCC ACCTGCTGAAGAACTTACAAGAAGTATTGGAAAAGGTATTTCACTCTAACTATCCTGCGCTGAAAAGTGTTGATGCAGCC CTCTTGAAATCTGAAGTACCTGAGCCACATGCACCAGAGAGTAACGAGAAAAGCAAGGTGCCTCCCGATGAGCAAGGTCC TCGGAGTCGTGCTCATCGATTGAACAACTATCAACAAACTCATGCCTTGAAGCAGCAGGGGTATTGA
Upstream 100 bases:
>100_bases GGTAGAGGATAGAGAAGTAAACCCTTGCCAGATCTGGTTATGGAACTCCTCCAGCAATTCCTTCCGTGCCAAGACACCCT CCATCTAGAAAGTTGGGATC
Downstream 100 bases:
>100_bases GTGACTGACATTGCTCATCATCTAGGTATTGCCAAAAGGACTGCTTACCAGTATTTGTCCCACCCATTCTTTCCTGAACA TCAGCCCTATACCCGTAAAG
Product: transposase
Products: NA
Alternate protein names: IS6 Family Transposase; ISL3 Family Transposase; LOW QUALITY PROTEIN Transposase; IS Transposase; Transposase For Insertion Sequence Element; Transposase Of ISMdi2 ISL3 Family; ISL3 Family ISFsp1-Like Transposase; Transposase Subfamily; Transposase Of
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MNSNHQITFHVSSTQVFACCPVCNQITHRVHSRYERTLRDLPCVDFCLTILLQVCKFFCRNEACKRCIFTERLPKVAVPW ARKTIRFAEHLTSIGLALGGAAAARLSYQINYGSSRNTMLRSIAKLEPPPAPTPKILGVDDFAFQRGHHYGTILVDLEHH RTIALLPDRDAKTLVAWLEEHPGVEILSRDRSKTYKSAISEGAPNAIQVADRFHLLKNLQEVLEKVFHSNYPALKSVDAA LLKSEVPEPHAPESNEKSKVPPDEQGPRSRAHRLNNYQQTHALKQQGY
Sequences:
>Translated_288_residues MNSNHQITFHVSSTQVFACCPVCNQITHRVHSRYERTLRDLPCVDFCLTILLQVCKFFCRNEACKRCIFTERLPKVAVPW ARKTIRFAEHLTSIGLALGGAAAARLSYQINYGSSRNTMLRSIAKLEPPPAPTPKILGVDDFAFQRGHHYGTILVDLEHH RTIALLPDRDAKTLVAWLEEHPGVEILSRDRSKTYKSAISEGAPNAIQVADRFHLLKNLQEVLEKVFHSNYPALKSVDAA LLKSEVPEPHAPESNEKSKVPPDEQGPRSRAHRLNNYQQTHALKQQGY >Mature_288_residues MNSNHQITFHVSSTQVFACCPVCNQITHRVHSRYERTLRDLPCVDFCLTILLQVCKFFCRNEACKRCIFTERLPKVAVPW ARKTIRFAEHLTSIGLALGGAAAARLSYQINYGSSRNTMLRSIAKLEPPPAPTPKILGVDDFAFQRGHHYGTILVDLEHH RTIALLPDRDAKTLVAWLEEHPGVEILSRDRSKTYKSAISEGAPNAIQVADRFHLLKNLQEVLEKVFHSNYPALKSVDAA LLKSEVPEPHAPESNEKSKVPPDEQGPRSRAHRLNNYQQTHALKQQGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32532; Mature: 32532
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSNHQITFHVSSTQVFACCPVCNQITHRVHSRYERTLRDLPCVDFCLTILLQVCKFFCR CCCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH NEACKRCIFTERLPKVAVPWARKTIRFAEHLTSIGLALGGAAAARLSYQINYGSSRNTML HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEECCCCHHHHH RSIAKLEPPPAPTPKILGVDDFAFQRGHHYGTILVDLEHHRTIALLPDRDAKTLVAWLEE HHHHHCCCCCCCCCCEECCCHHHHHCCCCEEEEEEEECCCCEEEEECCCCHHHHHHHHHH HPGVEILSRDRSKTYKSAISEGAPNAIQVADRFHLLKNLQEVLEKVFHSNYPALKSVDAA CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LLKSEVPEPHAPESNEKSKVPPDEQGPRSRAHRLNNYQQTHALKQQGY HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNSNHQITFHVSSTQVFACCPVCNQITHRVHSRYERTLRDLPCVDFCLTILLQVCKFFCR CCCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH NEACKRCIFTERLPKVAVPWARKTIRFAEHLTSIGLALGGAAAARLSYQINYGSSRNTML HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEECCCCHHHHH RSIAKLEPPPAPTPKILGVDDFAFQRGHHYGTILVDLEHHRTIALLPDRDAKTLVAWLEE HHHHHCCCCCCCCCCEECCCHHHHHCCCCEEEEEEEECCCCEEEEECCCCHHHHHHHHHH HPGVEILSRDRSKTYKSAISEGAPNAIQVADRFHLLKNLQEVLEKVFHSNYPALKSVDAA CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LLKSEVPEPHAPESNEKSKVPPDEQGPRSRAHRLNNYQQTHALKQQGY HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA