| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158336319
Identifier: 158336319
GI number: 158336319
Start: 3210193
End: 3210945
Strand: Direct
Name: 158336319
Synonym: AM1_3181
Alternate gene names: NA
Gene position: 3210193-3210945 (Clockwise)
Preceding gene: 158336317
Following gene: 158336320
Centisome position: 49.36
GC content: 46.08
Gene sequence:
>753_bases ATGATCTCTGCTCTACCGATTGTGGATAAAACTGTTCAACCCTCTGATTTAATTCCTTTACTTGGACAGTATCAGCTTCT GCCTCAGTTGCTGAAAGAACTGATTATTGACCAAGTGATTCAGGATGTGCAATTAAGCTCAGAAGAAGTTGTTCAGGCTG TAGAGCAGTTCTATCGCCAGTATCAAATTGGTGAGGAAGCTAGGCGTGAGGCCTGGCTAACGCATTACCGGATGACGCCT CAGCAACTGGCGGCCCAAGCTCAACGGCAGATGAAGTTGTATAAATTCAAACTCCAGACTTGGAATAACCAGGTAGAGTC TGATTTTCTGCAGCAGAAAGGGCAGTTCGATCAATACGTTTATTCCTTGATCCGAGTCGCAAGTGCTGAAGTGGCTCAAG AGTTGTACTTTCGGCTACAAGCGGGTGAACAAGCATTTGCAGATTTGGCAACCAAATATTCTCAAGGGCCTGAAGCACAA ACAGGTGGTTTGATTGGTCCTGTCACGGCTGCTAATCTGCACCCCACATTAGTGCAAATTCTGACCAGCGCTCAACCGGG GCAAGTACGCCCACCCATTCGTTTAGGTGAATGGTTTGTGATTGTCAGCTTGCAAAAATTGATCTCGGCTCAACTAGATG CCCCACTTCGACAACAATTGCTAGAGCAGCGCTTTAATGAGTGGCTGCAATTGCAACTGCAATCTGTTGTTGTATCTGAT GATTCTATTGCTGTTTCTGCGCAAACACCATGA
Upstream 100 bases:
>100_bases TATACTCTTCCTTCGTTTATCCTTTCATCTGTTTTATTCCTATAGTCTCTAGATTGATCTTTAGACTTGAATAACTCTCT CTATTAAGAGTATTTTTGAT
Downstream 100 bases:
>100_bases CTTCAGCTATCCTTGCCCTAGAATCTTTTCTCAAAGATCTGCCCGGTTTTGACCAGCTGTCAGAAGCGGTTTTATCTTCG GTGGCGAAAGAGTTTCAACC
Product: peptidyl-prolyl cis-trans isomerase domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MISALPIVDKTVQPSDLIPLLGQYQLLPQLLKELIIDQVIQDVQLSSEEVVQAVEQFYRQYQIGEEARREAWLTHYRMTP QQLAAQAQRQMKLYKFKLQTWNNQVESDFLQQKGQFDQYVYSLIRVASAEVAQELYFRLQAGEQAFADLATKYSQGPEAQ TGGLIGPVTAANLHPTLVQILTSAQPGQVRPPIRLGEWFVIVSLQKLISAQLDAPLRQQLLEQRFNEWLQLQLQSVVVSD DSIAVSAQTP
Sequences:
>Translated_250_residues MISALPIVDKTVQPSDLIPLLGQYQLLPQLLKELIIDQVIQDVQLSSEEVVQAVEQFYRQYQIGEEARREAWLTHYRMTP QQLAAQAQRQMKLYKFKLQTWNNQVESDFLQQKGQFDQYVYSLIRVASAEVAQELYFRLQAGEQAFADLATKYSQGPEAQ TGGLIGPVTAANLHPTLVQILTSAQPGQVRPPIRLGEWFVIVSLQKLISAQLDAPLRQQLLEQRFNEWLQLQLQSVVVSD DSIAVSAQTP >Mature_250_residues MISALPIVDKTVQPSDLIPLLGQYQLLPQLLKELIIDQVIQDVQLSSEEVVQAVEQFYRQYQIGEEARREAWLTHYRMTP QQLAAQAQRQMKLYKFKLQTWNNQVESDFLQQKGQFDQYVYSLIRVASAEVAQELYFRLQAGEQAFADLATKYSQGPEAQ TGGLIGPVTAANLHPTLVQILTSAQPGQVRPPIRLGEWFVIVSLQKLISAQLDAPLRQQLLEQRFNEWLQLQLQSVVVSD DSIAVSAQTP
Specific function: Unknown
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28377; Mature: 28377
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISALPIVDKTVQPSDLIPLLGQYQLLPQLLKELIIDQVIQDVQLSSEEVVQAVEQFYRQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH YQIGEEARREAWLTHYRMTPQQLAAQAQRQMKLYKFKLQTWNNQVESDFLQQKGQFDQYV HHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHH YSLIRVASAEVAQELYFRLQAGEQAFADLATKYSQGPEAQTGGLIGPVTAANLHPTLVQI HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH LTSAQPGQVRPPIRLGEWFVIVSLQKLISAQLDAPLRQQLLEQRFNEWLQLQLQSVVVSD HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC DSIAVSAQTP CCEEEECCCC >Mature Secondary Structure MISALPIVDKTVQPSDLIPLLGQYQLLPQLLKELIIDQVIQDVQLSSEEVVQAVEQFYRQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH YQIGEEARREAWLTHYRMTPQQLAAQAQRQMKLYKFKLQTWNNQVESDFLQQKGQFDQYV HHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHH YSLIRVASAEVAQELYFRLQAGEQAFADLATKYSQGPEAQTGGLIGPVTAANLHPTLVQI HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH LTSAQPGQVRPPIRLGEWFVIVSLQKLISAQLDAPLRQQLLEQRFNEWLQLQLQSVVVSD HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC DSIAVSAQTP CCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA