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The map label for this gene is yfhF [C]

Identifier: 158336311

GI number: 158336311

Start: 3202152

End: 3202508

Strand: Direct

Name: yfhF [C]

Synonym: AM1_3173

Alternate gene names: 158336311

Gene position: 3202152-3202508 (Clockwise)

Preceding gene: 158336310

Following gene: 158336312

Centisome position: 49.24

GC content: 47.06

Gene sequence:

>357_bases
ATGGCAGAAGCAACTCAGTCTCAACAACGCGGCATTATGATGACTGACAACGCCCTGAAGCATGTTCTGGAATTGCGAGA
GAAGCAAGGAACCGATCTGTGTTTACGCGTCGGTGTTCGGGGAGGTGGCTGTTCTGGTATGTCCTACACCATGGACTTTG
AAGATCCGAAAAATATTCAGGAATCGGATGAAGTATTTGATTATGACAGCTTTAAAGTCGTATCCGATCCCAAGAGTATG
CTGTATATTTATGGTTTGGTTCTCGACTACAGTGATGCCTTGATTGGCGGTGGGTTTCAATTCACTAACCCCAATGCGAC
GCAGACCTGCGGTTGTGGAACGTCTTTCTCTGCCTAG

Upstream 100 bases:

>100_bases
TCGTCGGCCAGTGTGAAGGCGGCTGATGTCAAGGCCCTGAGATAGAATAAACGGTAGAAGCAGTTGTTCATATTGATTTG
CAGAAGGAATAGGTGAACCC

Downstream 100 bases:

>100_bases
GATTATTTGGGAATGACTGACACCACCCTTGACGATGTCTTTAAGGAAGCGTTAGATCGCTATCAAGCAGGAGAACCTGC
TGAAGATTTAATTCCTGTAT

Product: iron-sulfur cluster assembly accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MAEATQSQQRGIMMTDNALKHVLELREKQGTDLCLRVGVRGGGCSGMSYTMDFEDPKNIQESDEVFDYDSFKVVSDPKSM
LYIYGLVLDYSDALIGGGFQFTNPNATQTCGCGTSFSA

Sequences:

>Translated_118_residues
MAEATQSQQRGIMMTDNALKHVLELREKQGTDLCLRVGVRGGGCSGMSYTMDFEDPKNIQESDEVFDYDSFKVVSDPKSM
LYIYGLVLDYSDALIGGGFQFTNPNATQTCGCGTSFSA
>Mature_117_residues
AEATQSQQRGIMMTDNALKHVLELREKQGTDLCLRVGVRGGGCSGMSYTMDFEDPKNIQESDEVFDYDSFKVVSDPKSML
YIYGLVLDYSDALIGGGFQFTNPNATQTCGCGTSFSA

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family. Ycf83 subfamily [H]

Homologues:

Organism=Homo sapiens, GI160420328, Length=107, Percent_Identity=39.2523364485981, Blast_Score=74, Evalue=3e-14,
Organism=Homo sapiens, GI52426768, Length=112, Percent_Identity=33.0357142857143, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=40.9523809523809, Blast_Score=80, Evalue=4e-17,
Organism=Escherichia coli, GI1786351, Length=105, Percent_Identity=41.9047619047619, Blast_Score=77, Evalue=2e-16,
Organism=Escherichia coli, GI1787974, Length=110, Percent_Identity=32.7272727272727, Blast_Score=65, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25146411, Length=107, Percent_Identity=36.4485981308411, Blast_Score=79, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI193209025, Length=107, Percent_Identity=36.4485981308411, Blast_Score=79, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6323001, Length=106, Percent_Identity=36.7924528301887, Blast_Score=73, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24642263, Length=107, Percent_Identity=36.4485981308411, Blast_Score=73, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24649697, Length=117, Percent_Identity=38.4615384615385, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 12903; Mature: 12771

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEATQSQQRGIMMTDNALKHVLELREKQGTDLCLRVGVRGGGCSGMSYTMDFEDPKNIQ
CCCCCCCHHCCEEEECHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCC
ESDEVFDYDSFKVVSDPKSMLYIYGLVLDYSDALIGGGFQFTNPNATQTCGCGTSFSA
CCCCEECCCCEEEECCCHHHHHHHHHHHHCCCCEECCCEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AEATQSQQRGIMMTDNALKHVLELREKQGTDLCLRVGVRGGGCSGMSYTMDFEDPKNIQ
CCCCCCHHCCEEEECHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCC
ESDEVFDYDSFKVVSDPKSMLYIYGLVLDYSDALIGGGFQFTNPNATQTCGCGTSFSA
CCCCEECCCCEEEECCCHHHHHHHHHHHHCCCCEECCCEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]