Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158336276

Identifier: 158336276

GI number: 158336276

Start: 3165715

End: 3166221

Strand: Direct

Name: 158336276

Synonym: AM1_3138

Alternate gene names: NA

Gene position: 3165715-3166221 (Clockwise)

Preceding gene: 158336275

Following gene: 158336277

Centisome position: 48.68

GC content: 52.86

Gene sequence:

>507_bases
ATGCTGCATCGATTGACTGCCTTAGCTTGGGCAAGCTTGGTCTCTATTGTCCTTCTCATGAGCCCTTCGGCTTCTGCTGC
GACCTTAGGGGCATTGCCTGGAGCTGCGAGCTTATTTGCTGGCAACGCTCCTGAGTTGGGTGTGCAGGAAGGACAGCTCT
CCCCCTGTCCTGATTCGCCGAATTGTGTGGCCAGCCAAAACGCAGATGCAGATCATGCGATCGCACCCCTGTCTTACAGC
AGTGATCGCGACACTGCCCGAGAAACGCTGTTAAAAGTATTAACCGTTGTGCCTCGAACCCGAGTGGTAGAGCAGACCAA
CGATTACATTCGGTTTGAATCCAGCAGTCGATTGTTGGGGTTTGTCGATGATGGTGAGTTTTATTTCCCTGCTGAAGACA
ACATTATTCAGATGCGTTCCGCCTCCCGAGTGGGAGAGTCCGATCTCAGCGTTAATCGCCGAAGAATGGAGCAAATTCGC
CTCGCCCTCCAGGACTTAGGTGTGTAG

Upstream 100 bases:

>100_bases
TTGTCCTACCCTGTTTTCTTGTGGCTGTCTACAATGCTTATGGGCGGTCTTAAAGGACGGGCTCATCCCTTTTCAAGTTT
TGAGGAACATCCTAAAAAAT

Downstream 100 bases:

>100_bases
ACGTGACCAAATTACTGCGGTATTGCTTGCCGCTGTTGTGTTGTGTGCTGCTGTTGACGGGTTGTGATCTGCCCCAGGTA
ACGGCAGAAGCCCGCATCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MLHRLTALAWASLVSIVLLMSPSASAATLGALPGAASLFAGNAPELGVQEGQLSPCPDSPNCVASQNADADHAIAPLSYS
SDRDTARETLLKVLTVVPRTRVVEQTNDYIRFESSSRLLGFVDDGEFYFPAEDNIIQMRSASRVGESDLSVNRRRMEQIR
LALQDLGV

Sequences:

>Translated_168_residues
MLHRLTALAWASLVSIVLLMSPSASAATLGALPGAASLFAGNAPELGVQEGQLSPCPDSPNCVASQNADADHAIAPLSYS
SDRDTARETLLKVLTVVPRTRVVEQTNDYIRFESSSRLLGFVDDGEFYFPAEDNIIQMRSASRVGESDLSVNRRRMEQIR
LALQDLGV
>Mature_168_residues
MLHRLTALAWASLVSIVLLMSPSASAATLGALPGAASLFAGNAPELGVQEGQLSPCPDSPNCVASQNADADHAIAPLSYS
SDRDTARETLLKVLTVVPRTRVVEQTNDYIRFESSSRLLGFVDDGEFYFPAEDNIIQMRSASRVGESDLSVNRRRMEQIR
LALQDLGV

Specific function: Unknown

COG id: COG4446

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18119; Mature: 18119

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHRLTALAWASLVSIVLLMSPSASAATLGALPGAASLFAGNAPELGVQEGQLSPCPDSP
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
NCVASQNADADHAIAPLSYSSDRDTARETLLKVLTVVPRTRVVEQTNDYIRFESSSRLLG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCEEEECCCCCEEE
FVDDGEFYFPAEDNIIQMRSASRVGESDLSVNRRRMEQIRLALQDLGV
EEECCCEEECCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLHRLTALAWASLVSIVLLMSPSASAATLGALPGAASLFAGNAPELGVQEGQLSPCPDSP
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
NCVASQNADADHAIAPLSYSSDRDTARETLLKVLTVVPRTRVVEQTNDYIRFESSSRLLG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCEEEECCCCCEEE
FVDDGEFYFPAEDNIIQMRSASRVGESDLSVNRRRMEQIRLALQDLGV
EEECCCEEECCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA