Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158336255

Identifier: 158336255

GI number: 158336255

Start: 3145558

End: 3146208

Strand: Reverse

Name: 158336255

Synonym: AM1_3117

Alternate gene names: NA

Gene position: 3146208-3145558 (Counterclockwise)

Preceding gene: 158336256

Following gene: 158336251

Centisome position: 48.38

GC content: 46.24

Gene sequence:

>651_bases
ATGGCCGCTCAGACCCAAGCTCGTGATTTATTTCGTGCAGCTTATGAGAATCGCTATACCTGGGATAGTGATTTCCCCGG
CTATGTCGCTGACGTTGAACTTAGACAAGGGGGTGAAGTTCACACCGGTAAAATCCGCGTAGCTTCCGACCTAAAAGTCG
AGATTATGGATATCGTAGACGAAACGATCCAAGAATCTCTATATACCCAAATGCGAGATGTGATTACCCATCGAAAACAC
ACTCCGTTCGACAAAGCTCACGGCTCGAGCACCTTTACCCTCGGAAAACTCGATTCGTCTGGTTCTCAAGAGATTATTGT
TGAAGGGGATGCAATGGGGTCAAATTACTGCGTTCGCGAAAAGCAAATCTCTCTAGTTAGCCGGGTGATGGGACGCATGG
CTTTCATCATTCACCACAAAAAAAGCTTAGAGACTGGAGCAGGTTATATTTCTTCTGATTATTCCGCTGTTTTCCGTAAT
CCCAAAACCAATGAGATTATTCGGCAAATGGAATTCGAGGATACCTATGAACCTGTGGGTAGCTACTACGTGATGACACG
TCAGGTGGTCCGTACCCATGAGCAAGGCGAAACATCCCTTACCGATATCCAGTTTTCCAACGTGAAGCTATTACAACCTG
CAGCCGTTTAG

Upstream 100 bases:

>100_bases
ATGACCACCCCAAATGCCATAATGACGATGGTTGAGCCAAAAATTAGTCTAGACTGGAAAAAAGTCTAACGCGCGAAACA
AGTTAAGGAGACTTCATGTA

Downstream 100 bases:

>100_bases
AGAGAAATCTTCTTTGAAGTTTTAAGGACTATCAAAATTATTCTGACCGAGCGGTAGAGAGAATTTCAAAGATCCAGTTC
AATTCTGGCAGAAGTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MAAQTQARDLFRAAYENRYTWDSDFPGYVADVELRQGGEVHTGKIRVASDLKVEIMDIVDETIQESLYTQMRDVITHRKH
TPFDKAHGSSTFTLGKLDSSGSQEIIVEGDAMGSNYCVREKQISLVSRVMGRMAFIIHHKKSLETGAGYISSDYSAVFRN
PKTNEIIRQMEFEDTYEPVGSYYVMTRQVVRTHEQGETSLTDIQFSNVKLLQPAAV

Sequences:

>Translated_216_residues
MAAQTQARDLFRAAYENRYTWDSDFPGYVADVELRQGGEVHTGKIRVASDLKVEIMDIVDETIQESLYTQMRDVITHRKH
TPFDKAHGSSTFTLGKLDSSGSQEIIVEGDAMGSNYCVREKQISLVSRVMGRMAFIIHHKKSLETGAGYISSDYSAVFRN
PKTNEIIRQMEFEDTYEPVGSYYVMTRQVVRTHEQGETSLTDIQFSNVKLLQPAAV
>Mature_215_residues
AAQTQARDLFRAAYENRYTWDSDFPGYVADVELRQGGEVHTGKIRVASDLKVEIMDIVDETIQESLYTQMRDVITHRKHT
PFDKAHGSSTFTLGKLDSSGSQEIIVEGDAMGSNYCVREKQISLVSRVMGRMAFIIHHKKSLETGAGYISSDYSAVFRNP
KTNEIIRQMEFEDTYEPVGSYYVMTRQVVRTHEQGETSLTDIQFSNVKLLQPAAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24458; Mature: 24327

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAQTQARDLFRAAYENRYTWDSDFPGYVADVELRQGGEVHTGKIRVASDLKVEIMDIVD
CCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEECEEEEECCCHHHHHHHHH
ETIQESLYTQMRDVITHRKHTPFDKAHGSSTFTLGKLDSSGSQEIIVEGDAMGSNYCVRE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCHHH
KQISLVSRVMGRMAFIIHHKKSLETGAGYISSDYSAVFRNPKTNEIIRQMEFEDTYEPVG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHCCHHHHHHHH
SYYVMTRQVVRTHEQGETSLTDIQFSNVKLLQPAAV
HHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCC
>Mature Secondary Structure 
AAQTQARDLFRAAYENRYTWDSDFPGYVADVELRQGGEVHTGKIRVASDLKVEIMDIVD
CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEECEEEEECCCHHHHHHHHH
ETIQESLYTQMRDVITHRKHTPFDKAHGSSTFTLGKLDSSGSQEIIVEGDAMGSNYCVRE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCHHH
KQISLVSRVMGRMAFIIHHKKSLETGAGYISSDYSAVFRNPKTNEIIRQMEFEDTYEPVG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHCCHHHHHHHH
SYYVMTRQVVRTHEQGETSLTDIQFSNVKLLQPAAV
HHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA