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The map label for this gene is vapI [H]

Identifier: 158336205

GI number: 158336205

Start: 3092366

End: 3092614

Strand: Reverse

Name: vapI [H]

Synonym: AM1_3067

Alternate gene names: 158336205

Gene position: 3092614-3092366 (Counterclockwise)

Preceding gene: 158336206

Following gene: 158336201

Centisome position: 47.55

GC content: 46.59

Gene sequence:

>249_bases
ATGAATCTTAGTCAAAATCAGATGGCTCTGGCACTTCGAGTCCCTGCACGACGGATTAACGAAATTGTTCATGGAAAGCG
CCGTATTACGGCGGATACAGCCCTTCGTTTAGCTCGTTATTTCAATATGTCGCCGCGCTTTTGGTTGGGATTGCAAATGG
ATTACGACTTGGATGTGGCTGAAGATGAAGTAGGGGAGCAACTGAATAGAGAAGTGGTTGCCCTAGGGAGTGAGCGTTCA
AAGCAATAA

Upstream 100 bases:

>100_bases
ACGCAGAGATCGTTGATTGTCACCGAGGTAGAAGTATGAATGAAGATAAGCTGATGCCAGTACATCCTGGTGAGGTACTT
TTGAAGAGTTTCTCAAGCCA

Downstream 100 bases:

>100_bases
GCGATCGCACAGGCATCGATTTCCCAAAATACCCCTAGGAGTTCTGCACAGCAAAGCCTTTGGTTTTACTATATTTCACG
GTTTTGAAGGTGATTTGATT

Product: plasmid maintenance system antidote protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MNLSQNQMALALRVPARRINEIVHGKRRITADTALRLARYFNMSPRFWLGLQMDYDLDVAEDEVGEQLNREVVALGSERS
KQ

Sequences:

>Translated_82_residues
MNLSQNQMALALRVPARRINEIVHGKRRITADTALRLARYFNMSPRFWLGLQMDYDLDVAEDEVGEQLNREVVALGSERS
KQ
>Mature_82_residues
MNLSQNQMALALRVPARRINEIVHGKRRITADTALRLARYFNMSPRFWLGLQMDYDLDVAEDEVGEQLNREVVALGSERS
KQ

Specific function: Unknown

COG id: COG3093

COG function: function code R; Plasmid maintenance system antidote protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013430
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 9474; Mature: 9474

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSQNQMALALRVPARRINEIVHGKRRITADTALRLARYFNMSPRFWLGLQMDYDLDVA
CCCCCCCEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
EDEVGEQLNREVVALGSERSKQ
HHHHHHHHCHHHEEECCCCCCC
>Mature Secondary Structure
MNLSQNQMALALRVPARRINEIVHGKRRITADTALRLARYFNMSPRFWLGLQMDYDLDVA
CCCCCCCEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
EDEVGEQLNREVVALGSERSKQ
HHHHHHHHCHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8169216 [H]