| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158336183
Identifier: 158336183
GI number: 158336183
Start: 3067840
End: 3069513
Strand: Reverse
Name: 158336183
Synonym: AM1_3045
Alternate gene names: NA
Gene position: 3069513-3067840 (Counterclockwise)
Preceding gene: 158336185
Following gene: 158336181
Centisome position: 47.2
GC content: 50.18
Gene sequence:
>1674_bases ATGGATCGCTCGACTCAGGTTCTATCCGTCGAGGTTAATGAGCGAGAGACAAGGCTGCGACCTCGCGATTGCAACCGCCT CGCATTCAGGTCAAACGATGATAGAGAAGCAATCCCCCTATTTTCATTTCACTCAGGACCCTTTGAACCTAGCCCTGCCC CTACCATTGCTGAAGAGGTCAGCGGAAAAACTGTCCCTTTAATGGCGTTTGCGTATAAAGCAAAACGCTTCAACGACTGG CTCTATGGCACCTTAGATCGTTCTGCCTTCCTTAGTGATTCTCCTGTCCTGGGTCGGCAAGCTTTGGTGAGCCAATTACG TGTAGCCCTAGACGATACAGCAGATCGAGTTGATCTCAAGGCTATGCTCTGTGCGGCTGAATATTTGGGTGGTGGGTCTG ACCTCTCTCACCTCCCAGGCGAACTCCGGCTACGGGTCAAACAAGCACTGAAAGAGTTTGAGGCGAAACCGCTGGTGTCC CGTCCCATTGGGTTTTATTCAGCATCAGAGTCATTGCGCCGCCTTTTTCAGCATGATCGCATGTTGCAGCAGCCACTTGA TCGCAATGCTGCACAAGTTTTGAGAGATGCAATTACACAAGCTCAACTGTTGAATGCATATCGCTGGCACCTTCAAGCCA ATGAACAATTGACAGGACAATTTGCTGTTCCGTCCGTAATGGCTGAGTTATCTCCTGAAAATCAATATGCGTTGTTCCCA CCTTCTAGGGCACCGGAGACCGATTTAATCAAGCAGCTCTATGGCAATGTCCCCATTCCTGATGACTTTTGCCTACTCGA TGAAGTCATTGTACGGGTCAAAGGGGGACGCTTAGATCTGAGTCCAGCAGAAGACGATGGCTGGTATTTGCGAGAACTCT ATGCTTTGGAAGCCCTGCTGAATCCGAGTTGCGATCGCCTTCGAGTCGGTCCTAAATATGGTGAAACGCTAGAGCAGCTC TTCAAGGGCCTCATGTCCCTGGCGCGCGAAACCCACATCAAGCAGCTTGAATCCCCCTACGCAGGCGGTGCCATGCTGAA CTTGGCGATTATGCCTCATCTCCGGCTAGAACCTGTGCCACGTTACTACGAGCGCATGGCTCATAACTATGGCTGGTTAC TGGATGGTTTAGTGGAGCTATGGGGTGAATCAGCATTGACCCGTGAGGTTCGCAATCGCAACGATCAACCCACGTGCATC CTAGATTCTCTGACTGAAATGCAAGCGCTCTTCTCTGGCGCAGCAGCGCTCTGTCGGGAAGACTTAGGGTTCCCAACGCC ACCGATGGATGCGGTAGGATGCATGTCTCGGGGGCAGGCTCGCAAGTTTTTAAGCAATTGGAAACACGAGCCAGACCTTC TGGCCGACTGCAGAATGATGGTGCCGCTCTACCATGACGTTATGCGGAAAAAGACGCGGGTTTCGGTGGTATGTGGTGTG CTGAGTCAAAAAATATCCGTACAGTTTGAGCAAAAGCCACAGGTCCAGATTACTGATGCAACAGGTAGATCTGTGAATAC TGATATCACGTGGTTGTCTTCTGCATACACATCAGTTTATCCGGTGCAATTTGAGTGTGATGTTTCAGATGTTCTTGATC GCGAAACCTTTCAGAATTTAGCAGATCAGCATCCTGTGCCTAGTGAACTAAAAGCTGTTCTTAAAGCCCTTTGA
Upstream 100 bases:
>100_bases TAAGTTTTATGGGTAACCCAAGACTGATGCTACTTGCAGCTAGGACTTCTAGGCTCTAATGAGTGAGTACTCTTTCAAAC ACAAAGATTGCCTTGTTCGC
Downstream 100 bases:
>100_bases CGCTTTCCCCCAACCCTAACGAGAAAGTAGACATTAGACGATCTCTAGCAAAAAATCAGGGAGAACATCTTCTCCTGACA GGGTAGCCGGAAGCTGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 557; Mature: 557
Protein sequence:
>557_residues MDRSTQVLSVEVNERETRLRPRDCNRLAFRSNDDREAIPLFSFHSGPFEPSPAPTIAEEVSGKTVPLMAFAYKAKRFNDW LYGTLDRSAFLSDSPVLGRQALVSQLRVALDDTADRVDLKAMLCAAEYLGGGSDLSHLPGELRLRVKQALKEFEAKPLVS RPIGFYSASESLRRLFQHDRMLQQPLDRNAAQVLRDAITQAQLLNAYRWHLQANEQLTGQFAVPSVMAELSPENQYALFP PSRAPETDLIKQLYGNVPIPDDFCLLDEVIVRVKGGRLDLSPAEDDGWYLRELYALEALLNPSCDRLRVGPKYGETLEQL FKGLMSLARETHIKQLESPYAGGAMLNLAIMPHLRLEPVPRYYERMAHNYGWLLDGLVELWGESALTREVRNRNDQPTCI LDSLTEMQALFSGAAALCREDLGFPTPPMDAVGCMSRGQARKFLSNWKHEPDLLADCRMMVPLYHDVMRKKTRVSVVCGV LSQKISVQFEQKPQVQITDATGRSVNTDITWLSSAYTSVYPVQFECDVSDVLDRETFQNLADQHPVPSELKAVLKAL
Sequences:
>Translated_557_residues MDRSTQVLSVEVNERETRLRPRDCNRLAFRSNDDREAIPLFSFHSGPFEPSPAPTIAEEVSGKTVPLMAFAYKAKRFNDW LYGTLDRSAFLSDSPVLGRQALVSQLRVALDDTADRVDLKAMLCAAEYLGGGSDLSHLPGELRLRVKQALKEFEAKPLVS RPIGFYSASESLRRLFQHDRMLQQPLDRNAAQVLRDAITQAQLLNAYRWHLQANEQLTGQFAVPSVMAELSPENQYALFP PSRAPETDLIKQLYGNVPIPDDFCLLDEVIVRVKGGRLDLSPAEDDGWYLRELYALEALLNPSCDRLRVGPKYGETLEQL FKGLMSLARETHIKQLESPYAGGAMLNLAIMPHLRLEPVPRYYERMAHNYGWLLDGLVELWGESALTREVRNRNDQPTCI LDSLTEMQALFSGAAALCREDLGFPTPPMDAVGCMSRGQARKFLSNWKHEPDLLADCRMMVPLYHDVMRKKTRVSVVCGV LSQKISVQFEQKPQVQITDATGRSVNTDITWLSSAYTSVYPVQFECDVSDVLDRETFQNLADQHPVPSELKAVLKAL >Mature_557_residues MDRSTQVLSVEVNERETRLRPRDCNRLAFRSNDDREAIPLFSFHSGPFEPSPAPTIAEEVSGKTVPLMAFAYKAKRFNDW LYGTLDRSAFLSDSPVLGRQALVSQLRVALDDTADRVDLKAMLCAAEYLGGGSDLSHLPGELRLRVKQALKEFEAKPLVS RPIGFYSASESLRRLFQHDRMLQQPLDRNAAQVLRDAITQAQLLNAYRWHLQANEQLTGQFAVPSVMAELSPENQYALFP PSRAPETDLIKQLYGNVPIPDDFCLLDEVIVRVKGGRLDLSPAEDDGWYLRELYALEALLNPSCDRLRVGPKYGETLEQL FKGLMSLARETHIKQLESPYAGGAMLNLAIMPHLRLEPVPRYYERMAHNYGWLLDGLVELWGESALTREVRNRNDQPTCI LDSLTEMQALFSGAAALCREDLGFPTPPMDAVGCMSRGQARKFLSNWKHEPDLLADCRMMVPLYHDVMRKKTRVSVVCGV LSQKISVQFEQKPQVQITDATGRSVNTDITWLSSAYTSVYPVQFECDVSDVLDRETFQNLADQHPVPSELKAVLKAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62774; Mature: 62774
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRSTQVLSVEVNERETRLRPRDCNRLAFRSNDDREAIPLFSFHSGPFEPSPAPTIAEEV CCCCCEEEEEEECCHHHCCCCCCCCEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHH SGKTVPLMAFAYKAKRFNDWLYGTLDRSAFLSDSPVLGRQALVSQLRVALDDTADRVDLK CCCCCHHHHHHHHHHHHCCCHHEECCCHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH AMLCAAEYLGGGSDLSHLPGELRLRVKQALKEFEAKPLVSRPIGFYSASESLRRLFQHDR HHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHH MLQQPLDRNAAQVLRDAITQAQLLNAYRWHLQANEQLTGQFAVPSVMAELSPENQYALFP HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCCEEECC PSRAPETDLIKQLYGNVPIPDDFCLLDEVIVRVKGGRLDLSPAEDDGWYLRELYALEALL CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHH NPSCDRLRVGPKYGETLEQLFKGLMSLARETHIKQLESPYAGGAMLNLAIMPHLRLEPVP CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCH RYYERMAHNYGWLLDGLVELWGESALTREVRNRNDQPTCILDSLTEMQALFSGAAALCRE HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DLGFPTPPMDAVGCMSRGQARKFLSNWKHEPDLLADCRMMVPLYHDVMRKKTRVSVVCGV HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSQKISVQFEQKPQVQITDATGRSVNTDITWLSSAYTSVYPVQFECDVSDVLDRETFQNL HHHHHEEEECCCCCEEEECCCCCCCCCCHHHHHHHHCEEECEEEECCHHHHHHHHHHHHH ADQHPVPSELKAVLKAL HHCCCCCHHHHHHHHHC >Mature Secondary Structure MDRSTQVLSVEVNERETRLRPRDCNRLAFRSNDDREAIPLFSFHSGPFEPSPAPTIAEEV CCCCCEEEEEEECCHHHCCCCCCCCEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHH SGKTVPLMAFAYKAKRFNDWLYGTLDRSAFLSDSPVLGRQALVSQLRVALDDTADRVDLK CCCCCHHHHHHHHHHHHCCCHHEECCCHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH AMLCAAEYLGGGSDLSHLPGELRLRVKQALKEFEAKPLVSRPIGFYSASESLRRLFQHDR HHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHH MLQQPLDRNAAQVLRDAITQAQLLNAYRWHLQANEQLTGQFAVPSVMAELSPENQYALFP HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCCEEECC PSRAPETDLIKQLYGNVPIPDDFCLLDEVIVRVKGGRLDLSPAEDDGWYLRELYALEALL CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHH NPSCDRLRVGPKYGETLEQLFKGLMSLARETHIKQLESPYAGGAMLNLAIMPHLRLEPVP CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCH RYYERMAHNYGWLLDGLVELWGESALTREVRNRNDQPTCILDSLTEMQALFSGAAALCRE HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DLGFPTPPMDAVGCMSRGQARKFLSNWKHEPDLLADCRMMVPLYHDVMRKKTRVSVVCGV HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSQKISVQFEQKPQVQITDATGRSVNTDITWLSSAYTSVYPVQFECDVSDVLDRETFQNL HHHHHEEEECCCCCEEEECCCCCCCCCCHHHHHHHHCEEECEEEECCHHHHHHHHHHHHH ADQHPVPSELKAVLKAL HHCCCCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA