| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158336154
Identifier: 158336154
GI number: 158336154
Start: 3044185
End: 3044751
Strand: Reverse
Name: 158336154
Synonym: AM1_3016
Alternate gene names: NA
Gene position: 3044751-3044185 (Counterclockwise)
Preceding gene: 158336155
Following gene: 158336153
Centisome position: 46.82
GC content: 49.21
Gene sequence:
>567_bases ATGACTACTATCATTTCGTCTAACCACCAGCCTGCTCACTTCCCAAAAGTAATCCAGTATGGTGCTCCTGCTCTACTCGC TCTTTCATCGGTTTTACTCACTAGCTTGGTGCCAGGAGGACTCATTGAGACCCGCAGCTTTTCCCACATCAATCCCGTCG TTTTAGGGGGCTTCAATACCTTTCTAACTTCTCTAAGTCTTGTGAGTCTGTTGTTGATTAACTTTACCTGGCAACGTCAG CGTTGGGCTTATTCAGCTTCGGCTTTTGCTGGTCTGTCTTACTTCCTGGTGTATGTGCTGGACTTAGGTCGCCTGTTCCC GGTGTCTCCTGATGCAATGCCTCTAGCTTTATTCGTGATTGAAGTCCTTGGGACTCTTATTTCATTGCCCTTAATGCTCG TTTCCCTGCAAGGATTACGGCGCGGTGGCGGGCTATCGACTGCTAGCCCTCAAGCTGGCAACCACTCCTTTACTCTGTCC AAGCAGTTCAGCACTGCAGTTGCCATCATGCTGCTTGGGGTTGGTATTATCATCTTTGCCACGCGCTCTGCGATGGGTCT TTCATAA
Upstream 100 bases:
>100_bases CCTACTTCATGAAACACCCTATCGCCCTGGTGAAAAGCTGTAGGTCACTTGCTTTTTGTCGATTTCGAGTTCTTTTTACC TAAAGTATGAGGATATCATC
Downstream 100 bases:
>100_bases GTTTCTGAAACTTTCTCGAATGCCGAATGATGATCTCGGAGGATGGAGAAAAATGGGCCCTGATACGTTAGAAAAATTTA CTGTTCGGACTACTGTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MTTIISSNHQPAHFPKVIQYGAPALLALSSVLLTSLVPGGLIETRSFSHINPVVLGGFNTFLTSLSLVSLLLINFTWQRQ RWAYSASAFAGLSYFLVYVLDLGRLFPVSPDAMPLALFVIEVLGTLISLPLMLVSLQGLRRGGGLSTASPQAGNHSFTLS KQFSTAVAIMLLGVGIIIFATRSAMGLS
Sequences:
>Translated_188_residues MTTIISSNHQPAHFPKVIQYGAPALLALSSVLLTSLVPGGLIETRSFSHINPVVLGGFNTFLTSLSLVSLLLINFTWQRQ RWAYSASAFAGLSYFLVYVLDLGRLFPVSPDAMPLALFVIEVLGTLISLPLMLVSLQGLRRGGGLSTASPQAGNHSFTLS KQFSTAVAIMLLGVGIIIFATRSAMGLS >Mature_187_residues TTIISSNHQPAHFPKVIQYGAPALLALSSVLLTSLVPGGLIETRSFSHINPVVLGGFNTFLTSLSLVSLLLINFTWQRQR WAYSASAFAGLSYFLVYVLDLGRLFPVSPDAMPLALFVIEVLGTLISLPLMLVSLQGLRRGGGLSTASPQAGNHSFTLSK QFSTAVAIMLLGVGIIIFATRSAMGLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20037; Mature: 19906
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIISSNHQPAHFPKVIQYGAPALLALSSVLLTSLVPGGLIETRSFSHINPVVLGGFNT CCCEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHH FLTSLSLVSLLLINFTWQRQRWAYSASAFAGLSYFLVYVLDLGRLFPVSPDAMPLALFVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH EVLGTLISLPLMLVSLQGLRRGGGLSTASPQAGNHSFTLSKQFSTAVAIMLLGVGIIIFA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH TRSAMGLS HHHHCCCC >Mature Secondary Structure TTIISSNHQPAHFPKVIQYGAPALLALSSVLLTSLVPGGLIETRSFSHINPVVLGGFNT CCEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHH FLTSLSLVSLLLINFTWQRQRWAYSASAFAGLSYFLVYVLDLGRLFPVSPDAMPLALFVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH EVLGTLISLPLMLVSLQGLRRGGGLSTASPQAGNHSFTLSKQFSTAVAIMLLGVGIIIFA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH TRSAMGLS HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA