Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158336139

Identifier: 158336139

GI number: 158336139

Start: 3030389

End: 3031198

Strand: Reverse

Name: 158336139

Synonym: AM1_3001

Alternate gene names: NA

Gene position: 3031198-3030389 (Counterclockwise)

Preceding gene: 158336140

Following gene: 158336138

Centisome position: 46.61

GC content: 52.35

Gene sequence:

>810_bases
GTGAACGGTAAAGATTGGCAGTCTTATAGAGTGAAAGGGTGGGGTATTTGTCTGGCACTTTTGCTCTGCTGCTGGTCTTT
ACCGGGGCTGGCTAGTCCTTTAACAGAACGCCTAGCAGCCTTTCCCGATTGGCAAGGAAAGCCGGTGCTGAAACCGGCGT
CTGGCGACTTGATCTATCCCGACTGGTTTTTAGGAGATTGGCAGGTTACCAGTACCCTCGTGGATCTGGCGGCTCCCTTA
GCGCCTGACTTAGTTACCCCCGGCTATGCCGATAATGAGCGCTTGTTAGATCAGCCCGTGACCTTTGCGGTGCGCTTTGT
CGAAGAACGGACGCCTTTAAAGGCAAAAGTGCTGGCCAATGCATCCCCTTGGGAGTTGTTGTCCCGTAAACCTTCGGTGA
TTGCTGACTTAGCATTCAATGGTCGGAGTTTAGCTGCTGCTTACCTCGGTGAAGCGGCTGTGCAAACGGTGAAAGTTGAT
CCTCGCTTTCCCAATCGCCAAACGACGGTGCTCAATCAGGGGCGACAACTCGTATCGACCATTAGCGATCGCACCACTGA
ATTTGATGCTAAGACCGATACCTGGATTGCCAGCGAACTGTTTCAGCAAGAGTTTCGCAGCAGCGCCCAACTGTATCTCA
ACCAAGTCGAAAATACGACGTCGTACCGCTACATCAACACAAGTCCGGCCCAAATCGACGCGGATCAAGTGACGGCGATC
TACTTATCCCCCCAGGATCCCAACTATTTTCAAGCCCTGAATCAACCGGTGGCCCTCTATCGCTATCATCTAGTGCTAGT
CGCTAAGTGA

Upstream 100 bases:

>100_bases
TCTGCCCCATGCAAACCAAGGTCGATGCGGATGCCTTAACTGAACTGGAGAAGTTCTTAGCTAAGGATCAAGTGGGTTCT
GCCCGTTAGGAGAAAAAGAG

Downstream 100 bases:

>100_bases
TTTAACTGTATGGCATGGGTTAAATTGACCCTGGATGAACGCTAGTCGCGAGCGATGGCAAATGGATCCAGCCATGTTCT
GTAAAGCAATGCTAAGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MNGKDWQSYRVKGWGICLALLLCCWSLPGLASPLTERLAAFPDWQGKPVLKPASGDLIYPDWFLGDWQVTSTLVDLAAPL
APDLVTPGYADNERLLDQPVTFAVRFVEERTPLKAKVLANASPWELLSRKPSVIADLAFNGRSLAAAYLGEAAVQTVKVD
PRFPNRQTTVLNQGRQLVSTISDRTTEFDAKTDTWIASELFQQEFRSSAQLYLNQVENTTSYRYINTSPAQIDADQVTAI
YLSPQDPNYFQALNQPVALYRYHLVLVAK

Sequences:

>Translated_269_residues
MNGKDWQSYRVKGWGICLALLLCCWSLPGLASPLTERLAAFPDWQGKPVLKPASGDLIYPDWFLGDWQVTSTLVDLAAPL
APDLVTPGYADNERLLDQPVTFAVRFVEERTPLKAKVLANASPWELLSRKPSVIADLAFNGRSLAAAYLGEAAVQTVKVD
PRFPNRQTTVLNQGRQLVSTISDRTTEFDAKTDTWIASELFQQEFRSSAQLYLNQVENTTSYRYINTSPAQIDADQVTAI
YLSPQDPNYFQALNQPVALYRYHLVLVAK
>Mature_269_residues
MNGKDWQSYRVKGWGICLALLLCCWSLPGLASPLTERLAAFPDWQGKPVLKPASGDLIYPDWFLGDWQVTSTLVDLAAPL
APDLVTPGYADNERLLDQPVTFAVRFVEERTPLKAKVLANASPWELLSRKPSVIADLAFNGRSLAAAYLGEAAVQTVKVD
PRFPNRQTTVLNQGRQLVSTISDRTTEFDAKTDTWIASELFQQEFRSSAQLYLNQVENTTSYRYINTSPAQIDADQVTAI
YLSPQDPNYFQALNQPVALYRYHLVLVAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30071; Mature: 30071

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGKDWQSYRVKGWGICLALLLCCWSLPGLASPLTERLAAFPDWQGKPVLKPASGDLIYP
CCCCCCCCEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCEECC
DWFLGDWQVTSTLVDLAAPLAPDLVTPGYADNERLLDQPVTFAVRFVEERTPLKAKVLAN
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHCCCCEEEEECC
ASPWELLSRKPSVIADLAFNGRSLAAAYLGEAAVQTVKVDPRFPNRQTTVLNQGRQLVST
CCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHH
ISDRTTEFDAKTDTWIASELFQQEFRSSAQLYLNQVENTTSYRYINTSPAQIDADQVTAI
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCEEEE
YLSPQDPNYFQALNQPVALYRYHLVLVAK
EECCCCCHHHHHHCCCHHEEEEEEEEEEC
>Mature Secondary Structure
MNGKDWQSYRVKGWGICLALLLCCWSLPGLASPLTERLAAFPDWQGKPVLKPASGDLIYP
CCCCCCCCEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCEECC
DWFLGDWQVTSTLVDLAAPLAPDLVTPGYADNERLLDQPVTFAVRFVEERTPLKAKVLAN
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHCCCCEEEEECC
ASPWELLSRKPSVIADLAFNGRSLAAAYLGEAAVQTVKVDPRFPNRQTTVLNQGRQLVST
CCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHH
ISDRTTEFDAKTDTWIASELFQQEFRSSAQLYLNQVENTTSYRYINTSPAQIDADQVTAI
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCEEEE
YLSPQDPNYFQALNQPVALYRYHLVLVAK
EECCCCCHHHHHHCCCHHEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA