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The map label for this gene is 158336124

Identifier: 158336124

GI number: 158336124

Start: 3014235

End: 3016046

Strand: Direct

Name: 158336124

Synonym: AM1_2986

Alternate gene names: NA

Gene position: 3014235-3016046 (Clockwise)

Preceding gene: 158336123

Following gene: 158336125

Centisome position: 46.35

GC content: 48.84

Gene sequence:

>1812_bases
ATGTCCAAATTTTTATCCTGGTACCGGCTGCTTTTAAGTACCAGTATGTTGGGAATCGCAATGGTGCATTGCATCCCTGC
TCAGGCAGTTACGGAGACATCAAGCGCTGATGTCACTGCAGAAGAATTGGAGATCACTCCCAGTGGTGATGCCCCTTCAG
CAGTAGAACTACCGTCTACTGACGGCGAACTGGAACTTGCCCAAGCAGTGGAACCATCCACCTTGGCAACACCCCCGACT
TCCATTACAGACCTTTCAGGGAATCAAAGCGACCCCTATTTCCCTGCAGACCCCAGTTTGCATGCCTCTGAGGCATCCTT
AGGTCAGGTCACTTCTGTTTCCCAATTATCAGATGTTCAGCCGGATGACTGGGCCTTCCAAGCGATCCAATCCTTGGTGG
AACGCTATGGTTGTGTCGCCGGTTATCCCAACGGCACCTTCCGTCCGAGCCGAGCCATGTCCCGTCGTGAAGCGGCTGCC
TTGGTCAACGCTTGCTTAGATAACCTCAGCAATCGATTTGCTACCAAAGAGGATCTAGATGCCCTCAAAGCTCTGCAAGA
TGAGTTTGCCGCCGAACTGGCCACCCTCAGAGGTCGGGTAGACGGTTTAGAAGCAAGAGTCGCAACTGTAGAAGCTCAGC
AGTTCTCAACCACCACTAAATTAAACGGGGAAGCTATTTTTGCGTTTAGTGGTGTCGCTGGTGACAATGCCACCACTGGT
GCTGACATTAGTGGGCGCGTCTCCTTAAACCAGAGAACCCGTCTCAACTTTATTACCAGTTTTACCGGTAAGGATCGGTT
ATATACCCGACTACAAACCTCTAATCGTCCCGTCAACTTTAGTGATGGTGCCATCCCTGGAATTATTGATAATACAGGGA
CTTTGCAAACTCGGATTGCCTTTGACACGGGCAATACCAACAACAACGTTATCCTCGATCGCTTAGACTACAAATTCCCC
ATTGGTGACAAGCTAAATGTCACGGTCTTTGCAAATGCGGCCTTCCACCACTACTACGCAACCACTGTTAACCCTTACTT
TGAGGGATTCGGTGGTGGTAAAGGTGCGCTTTCCTTCTTTGGTGAGCGTAACCCCATCTACCGCATTGGTACGGTTGCGA
TTCCCAGTGTTGCGGGTGTCGGCACCTCCTACATGTTCAACAAGGAAAATGATTTTCGGCTGGACTTAGGCTACTTAGCA
GGTCGTGCTAACCAAGCGACAGCAACAACTCTGGCCAACGGTGAAAATGAAGGTGGGTTATTTGGGGGAACCTATAGCGC
GTTAGCCCAGCTCAGCATCAAACCATCAGAAGGGTCTCAAATCGGCTTAACCTATATTCGTAATGAAGCCCCTGATGGCT
TAATGAGATTTGGCACTGGAACGGTCTTTTCTAATAATCCCTTTGGCGGTGCCAATAACATCACTGGTGATTCCTTCGGC
TTCGAAGGAACGCTCAAAGTAACAGATTGGCTAGCGGTAGGGGGTTGGTTTGGCTACACGATTGCTCGTGAAGACAATAC
CAATAACAAAGCAGATATCATCAATGCTGCAATTAACTTTGCCTTTCCAGACCTAGGCATTGAAGGCGCCACTGGCGGTC
TCATCTTTGGTGTCCCACCAACAGTCATTGATAACGATGTTGCTGCTCGGGAAAACCCAGATCAGACCTATCATCTAGAA
GCACTGTATTCCTTCCCAGTTAATGATTTCATCACCATTACACCGGGTGTTATTTACCTCATTGATCCGGAAGGTAACTC
TGCCAACAGTGACATCTTAGTGGGAGTCATTCGAACTACATTCAAGTTCTAA

Upstream 100 bases:

>100_bases
CAAATCTAGGAATAGGTATTCATTAAACTGAGCGGACGTTGAACGGAGGTTCTCCCTACATGTTCAGCTCATTAATTCGG
TGTGAGGTTACTGAAACAAT

Downstream 100 bases:

>100_bases
AAACCTTCACACAATAGATAGAAGTTGATGACCTAGGGAGCAAAATCACATTTGTTCCCTAGTTTTTTTTGTACAAGAGA
TAGCGTTTTTTCCACACTGC

Product: carbohydrate porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 603; Mature: 602

Protein sequence:

>603_residues
MSKFLSWYRLLLSTSMLGIAMVHCIPAQAVTETSSADVTAEELEITPSGDAPSAVELPSTDGELELAQAVEPSTLATPPT
SITDLSGNQSDPYFPADPSLHASEASLGQVTSVSQLSDVQPDDWAFQAIQSLVERYGCVAGYPNGTFRPSRAMSRREAAA
LVNACLDNLSNRFATKEDLDALKALQDEFAAELATLRGRVDGLEARVATVEAQQFSTTTKLNGEAIFAFSGVAGDNATTG
ADISGRVSLNQRTRLNFITSFTGKDRLYTRLQTSNRPVNFSDGAIPGIIDNTGTLQTRIAFDTGNTNNNVILDRLDYKFP
IGDKLNVTVFANAAFHHYYATTVNPYFEGFGGGKGALSFFGERNPIYRIGTVAIPSVAGVGTSYMFNKENDFRLDLGYLA
GRANQATATTLANGENEGGLFGGTYSALAQLSIKPSEGSQIGLTYIRNEAPDGLMRFGTGTVFSNNPFGGANNITGDSFG
FEGTLKVTDWLAVGGWFGYTIAREDNTNNKADIINAAINFAFPDLGIEGATGGLIFGVPPTVIDNDVAARENPDQTYHLE
ALYSFPVNDFITITPGVIYLIDPEGNSANSDILVGVIRTTFKF

Sequences:

>Translated_603_residues
MSKFLSWYRLLLSTSMLGIAMVHCIPAQAVTETSSADVTAEELEITPSGDAPSAVELPSTDGELELAQAVEPSTLATPPT
SITDLSGNQSDPYFPADPSLHASEASLGQVTSVSQLSDVQPDDWAFQAIQSLVERYGCVAGYPNGTFRPSRAMSRREAAA
LVNACLDNLSNRFATKEDLDALKALQDEFAAELATLRGRVDGLEARVATVEAQQFSTTTKLNGEAIFAFSGVAGDNATTG
ADISGRVSLNQRTRLNFITSFTGKDRLYTRLQTSNRPVNFSDGAIPGIIDNTGTLQTRIAFDTGNTNNNVILDRLDYKFP
IGDKLNVTVFANAAFHHYYATTVNPYFEGFGGGKGALSFFGERNPIYRIGTVAIPSVAGVGTSYMFNKENDFRLDLGYLA
GRANQATATTLANGENEGGLFGGTYSALAQLSIKPSEGSQIGLTYIRNEAPDGLMRFGTGTVFSNNPFGGANNITGDSFG
FEGTLKVTDWLAVGGWFGYTIAREDNTNNKADIINAAINFAFPDLGIEGATGGLIFGVPPTVIDNDVAARENPDQTYHLE
ALYSFPVNDFITITPGVIYLIDPEGNSANSDILVGVIRTTFKF
>Mature_602_residues
SKFLSWYRLLLSTSMLGIAMVHCIPAQAVTETSSADVTAEELEITPSGDAPSAVELPSTDGELELAQAVEPSTLATPPTS
ITDLSGNQSDPYFPADPSLHASEASLGQVTSVSQLSDVQPDDWAFQAIQSLVERYGCVAGYPNGTFRPSRAMSRREAAAL
VNACLDNLSNRFATKEDLDALKALQDEFAAELATLRGRVDGLEARVATVEAQQFSTTTKLNGEAIFAFSGVAGDNATTGA
DISGRVSLNQRTRLNFITSFTGKDRLYTRLQTSNRPVNFSDGAIPGIIDNTGTLQTRIAFDTGNTNNNVILDRLDYKFPI
GDKLNVTVFANAAFHHYYATTVNPYFEGFGGGKGALSFFGERNPIYRIGTVAIPSVAGVGTSYMFNKENDFRLDLGYLAG
RANQATATTLANGENEGGLFGGTYSALAQLSIKPSEGSQIGLTYIRNEAPDGLMRFGTGTVFSNNPFGGANNITGDSFGF
EGTLKVTDWLAVGGWFGYTIAREDNTNNKADIINAAINFAFPDLGIEGATGGLIFGVPPTVIDNDVAARENPDQTYHLEA
LYSFPVNDFITITPGVIYLIDPEGNSANSDILVGVIRTTFKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049
- InterPro:   IPR001119 [H]

Pfam domain/function: PF04966 OprB; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 64447; Mature: 64316

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFLSWYRLLLSTSMLGIAMVHCIPAQAVTETSSADVTAEELEITPSGDAPSAVELPST
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHEEEECCCCCCCEEECCCC
DGELELAQAVEPSTLATPPTSITDLSGNQSDPYFPADPSLHASEASLGQVTSVSQLSDVQ
CCCEEHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHCCC
PDDWAFQAIQSLVERYGCVAGYPNGTFRPSRAMSRREAAALVNACLDNLSNRFATKEDLD
CCHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ALKALQDEFAAELATLRGRVDGLEARVATVEAQQFSTTTKLNGEAIFAFSGVAGDNATTG
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHCCCEEEECCCEEEEEECCCCCCCCCC
ADISGRVSLNQRTRLNFITSFTGKDRLYTRLQTSNRPVNFSDGAIPGIIDNTGTLQTRIA
CCCCEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCEEEEEE
FDTGNTNNNVILDRLDYKFPIGDKLNVTVFANAAFHHYYATTVNPYFEGFGGGKGALSFF
EECCCCCCCEEEEECCCCCCCCCCEEEEEEEECEEEEEEEEECCHHHHCCCCCCCHHHHC
GERNPIYRIGTVAIPSVAGVGTSYMFNKENDFRLDLGYLAGRANQATATTLANGENEGGL
CCCCCEEEEECEECCCHHCCCCEEEECCCCCEEEEHHHHCCCCCCCEEEEECCCCCCCCC
FGGTYSALAQLSIKPSEGSQIGLTYIRNEAPDGLMRFGTGTVFSNNPFGGANNITGDSFG
CCCHHHHHEEEEECCCCCCEEEEEEEECCCCCCHHHCCCCEEECCCCCCCCCCCCCCCCC
FEGTLKVTDWLAVGGWFGYTIAREDNTNNKADIINAAINFAFPDLGIEGATGGLIFGVPP
CCEEEEEEEEEEECCEEEEEEEECCCCCCHHHHEEHHHHEECCCCCCCCCCCCEEECCCC
TVIDNDVAARENPDQTYHLEALYSFPVNDFITITPGVIYLIDPEGNSANSDILVGVIRTT
HHCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCEEEEECCCCCCCCCCEEEEEEHHH
FKF
CCC
>Mature Secondary Structure 
SKFLSWYRLLLSTSMLGIAMVHCIPAQAVTETSSADVTAEELEITPSGDAPSAVELPST
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHEEEECCCCCCCEEECCCC
DGELELAQAVEPSTLATPPTSITDLSGNQSDPYFPADPSLHASEASLGQVTSVSQLSDVQ
CCCEEHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHCCC
PDDWAFQAIQSLVERYGCVAGYPNGTFRPSRAMSRREAAALVNACLDNLSNRFATKEDLD
CCHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ALKALQDEFAAELATLRGRVDGLEARVATVEAQQFSTTTKLNGEAIFAFSGVAGDNATTG
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHCCCEEEECCCEEEEEECCCCCCCCCC
ADISGRVSLNQRTRLNFITSFTGKDRLYTRLQTSNRPVNFSDGAIPGIIDNTGTLQTRIA
CCCCEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCEEEEEE
FDTGNTNNNVILDRLDYKFPIGDKLNVTVFANAAFHHYYATTVNPYFEGFGGGKGALSFF
EECCCCCCCEEEEECCCCCCCCCCEEEEEEEECEEEEEEEEECCHHHHCCCCCCCHHHHC
GERNPIYRIGTVAIPSVAGVGTSYMFNKENDFRLDLGYLAGRANQATATTLANGENEGGL
CCCCCEEEEECEECCCHHCCCCEEEECCCCCEEEEHHHHCCCCCCCEEEEECCCCCCCCC
FGGTYSALAQLSIKPSEGSQIGLTYIRNEAPDGLMRFGTGTVFSNNPFGGANNITGDSFG
CCCHHHHHEEEEECCCCCCEEEEEEEECCCCCCHHHCCCCEEECCCCCCCCCCCCCCCCC
FEGTLKVTDWLAVGGWFGYTIAREDNTNNKADIINAAINFAFPDLGIEGATGGLIFGVPP
CCEEEEEEEEEEECCEEEEEEEECCCCCCHHHHEEHHHHEECCCCCCCCCCCCEEECCCC
TVIDNDVAARENPDQTYHLEALYSFPVNDFITITPGVIYLIDPEGNSANSDILVGVIRTT
HHCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCEEEEECCCCCCCCCCEEEEEEHHH
FKF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]