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The map label for this gene is 158336110

Identifier: 158336110

GI number: 158336110

Start: 3001900

End: 3002481

Strand: Reverse

Name: 158336110

Synonym: AM1_2972

Alternate gene names: NA

Gene position: 3002481-3001900 (Counterclockwise)

Preceding gene: 158336114

Following gene: 158336108

Centisome position: 46.17

GC content: 52.06

Gene sequence:

>582_bases
GTGACGTATCCAGACTGGGCACTGCATGTTCGGATTTTGGGTGGTTTTATCAGTGTGCTCTGGGTTCTAGAGATTGCAGA
TACGTTGATATTGAAAGGCTGGCTGAATCGATTTGGCATTTTGCCACGGCGATGGATTGGCTTGCGAGGCATTGTGTTGG
CTCCGCTACTCCACGGCAATCTTCGGCATCTGTCCATGAATACAGTGCCCCTGGTGGTTTTGGGCTGGCTGATTTTGGTG
CGCTCGACCCAAGTATTTGTGGTGGTTACTGCTGCCGTTTGGCTGATTGGCGGGCTAGGGGTTTGGCTGTTTGCGGGGTC
TAAATCCAACCATATTGGAGCGAGTGGCTTGGTGTTTGGCTATCTGGGATTTCTACTGATGAATGGCTATGTAGAGCAAA
GCGGGGTTGCGATCGCAACGGCAACTCTAGTCGGTCTCCTCTATGGCAGCACCCTCTGGAGCATTCTGCCGTTACAACGG
GGAGTCTCTTGGCAAGGCCATTTATTTGGTGTACTCACGGGCGGGCTCTGTGCTTACTATCTGCCCCAAATCCAGGAATT
GCTGCAAACGACGCTGGTTTAA

Upstream 100 bases:

>100_bases
GATGTTTCTCCTAAGGATTGCTAGGTTGTTGAAGGGGCTGTTGAACCCCTCACGGAATCAATAGGGTTGGGTTGAAACGT
TTATGCACTTCGATGCCTTT

Downstream 100 bases:

>100_bases
CCCAATGGCATCTCATTCAAAAACGTTAGAACTTTAGTCTGATAACGGAATCTCTGGCATCGCTTCAAGATCGGTTAATG
CATCCTGCAATGCGATCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MTYPDWALHVRILGGFISVLWVLEIADTLILKGWLNRFGILPRRWIGLRGIVLAPLLHGNLRHLSMNTVPLVVLGWLILV
RSTQVFVVVTAAVWLIGGLGVWLFAGSKSNHIGASGLVFGYLGFLLMNGYVEQSGVAIATATLVGLLYGSTLWSILPLQR
GVSWQGHLFGVLTGGLCAYYLPQIQELLQTTLV

Sequences:

>Translated_193_residues
MTYPDWALHVRILGGFISVLWVLEIADTLILKGWLNRFGILPRRWIGLRGIVLAPLLHGNLRHLSMNTVPLVVLGWLILV
RSTQVFVVVTAAVWLIGGLGVWLFAGSKSNHIGASGLVFGYLGFLLMNGYVEQSGVAIATATLVGLLYGSTLWSILPLQR
GVSWQGHLFGVLTGGLCAYYLPQIQELLQTTLV
>Mature_192_residues
TYPDWALHVRILGGFISVLWVLEIADTLILKGWLNRFGILPRRWIGLRGIVLAPLLHGNLRHLSMNTVPLVVLGWLILVR
STQVFVVVTAAVWLIGGLGVWLFAGSKSNHIGASGLVFGYLGFLLMNGYVEQSGVAIATATLVGLLYGSTLWSILPLQRG
VSWQGHLFGVLTGGLCAYYLPQIQELLQTTLV

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1171 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022764 [H]

Pfam domain/function: PF01694 Rhomboid [H]

EC number: NA

Molecular weight: Translated: 21104; Mature: 20972

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYPDWALHVRILGGFISVLWVLEIADTLILKGWLNRFGILPRRWIGLRGIVLAPLLHGN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
LRHLSMNTVPLVVLGWLILVRSTQVFVVVTAAVWLIGGLGVWLFAGSKSNHIGASGLVFG
HHEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHH
YLGFLLMNGYVEQSGVAIATATLVGLLYGSTLWSILPLQRGVSWQGHLFGVLTGGLCAYY
HHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LPQIQELLQTTLV
HHHHHHHHHHHCC
>Mature Secondary Structure 
TYPDWALHVRILGGFISVLWVLEIADTLILKGWLNRFGILPRRWIGLRGIVLAPLLHGN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
LRHLSMNTVPLVVLGWLILVRSTQVFVVVTAAVWLIGGLGVWLFAGSKSNHIGASGLVFG
HHEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHH
YLGFLLMNGYVEQSGVAIATATLVGLLYGSTLWSILPLQRGVSWQGHLFGVLTGGLCAYY
HHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LPQIQELLQTTLV
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]