| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158336086
Identifier: 158336086
GI number: 158336086
Start: 2978646
End: 2979425
Strand: Direct
Name: 158336086
Synonym: AM1_2947
Alternate gene names: NA
Gene position: 2978646-2979425 (Clockwise)
Preceding gene: 158336085
Following gene: 158336087
Centisome position: 45.8
GC content: 56.92
Gene sequence:
>780_bases ATGACCATCCAACGCCCATTTATTCTGCCCAACTGTACCCTCAACCTCGAAGGCATCAGTAACTCAATCACGGATGCCGC CCTCGGAGAATCCTTAGATGTGCTCCTTCGCCTAGAGTGCCAGTTTGGGGATTTAAAAAAACCCCTGATCGGCGGCCTGG ATCTGCTCAATAGCCTGATTCAAGCCACGAATCAATGTACTCAGTCCTGGATGAGTGGTGTCCCCCATCGTCGCTTGGCA AAGCTGAACCAAGATCAGTCTGCGGTTCACCTGTTGCCCAAGGAAGAAGATGGGTTTGAGCTGACCATTCCCCTGGAACT CCTCAACGAAGCCCCCAGCGATGCTGACGATCCGGTGCGAGTGGGCTTAACCACGATCCAGCTGTTTGATCTTGTGGAAG CCTTAGATCAACTCTTAGCCGATCAGCAAACCCTGCCCAATCTCTCCCTGGCCGTGCGGCCCTTGTCCCGTTCAGAAGCA GCTTCAGGCCAAGCCCTGCAGAAATCCACGTCTGCCGTATTGGGTGCAGCCAGTGTTGCGATCGCAGCCTCGATCTTCTA CCTCCTGCCGGTTCCCAAAGCTAGCCCACCGCCGAAGGATCCCCCTAAAACCGCACCCACCAGCACGGAGAGCCCCGCAC CAGGGACCGCACCTCCTGGCGTTCCACCCATCCAGGTCTCCCCCTCTCCAGAAGAATCCCCTGCCGCCTCTCCCAGTCCA GAGAACACGGAGGCATCGCCAAGTCCAGAGGCTTCGCCCGAACCAGAAGAATCTCCTTAA
Upstream 100 bases:
>100_bases TGGCGTTGAGTCTGTTGGAACAAGTGCTGTTTTGTACCGGAACAGCCGGAATGGAACGATTTTGGTCTAGTCTGTTTGAT GGAGAAGTGGCCTAACCCCA
Downstream 100 bases:
>100_bases CTTCTTTTCCTACCTATTAAAGCTGCACCTATAAATTCGCGAGCGTCATGAATCGATCTGTCTGGGCAATCGTTACGGCT CTCTGGAGTCTGGGAAACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTIQRPFILPNCTLNLEGISNSITDAALGESLDVLLRLECQFGDLKKPLIGGLDLLNSLIQATNQCTQSWMSGVPHRRLA KLNQDQSAVHLLPKEEDGFELTIPLELLNEAPSDADDPVRVGLTTIQLFDLVEALDQLLADQQTLPNLSLAVRPLSRSEA ASGQALQKSTSAVLGAASVAIAASIFYLLPVPKASPPPKDPPKTAPTSTESPAPGTAPPGVPPIQVSPSPEESPAASPSP ENTEASPSPEASPEPEESP
Sequences:
>Translated_259_residues MTIQRPFILPNCTLNLEGISNSITDAALGESLDVLLRLECQFGDLKKPLIGGLDLLNSLIQATNQCTQSWMSGVPHRRLA KLNQDQSAVHLLPKEEDGFELTIPLELLNEAPSDADDPVRVGLTTIQLFDLVEALDQLLADQQTLPNLSLAVRPLSRSEA ASGQALQKSTSAVLGAASVAIAASIFYLLPVPKASPPPKDPPKTAPTSTESPAPGTAPPGVPPIQVSPSPEESPAASPSP ENTEASPSPEASPEPEESP >Mature_258_residues TIQRPFILPNCTLNLEGISNSITDAALGESLDVLLRLECQFGDLKKPLIGGLDLLNSLIQATNQCTQSWMSGVPHRRLAK LNQDQSAVHLLPKEEDGFELTIPLELLNEAPSDADDPVRVGLTTIQLFDLVEALDQLLADQQTLPNLSLAVRPLSRSEAA SGQALQKSTSAVLGAASVAIAASIFYLLPVPKASPPPKDPPKTAPTSTESPAPGTAPPGVPPIQVSPSPEESPAASPSPE NTEASPSPEASPEPEESP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27207; Mature: 27076
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIQRPFILPNCTLNLEGISNSITDAALGESLDVLLRLECQFGDLKKPLIGGLDLLNSLI CCCCCCEECCCCEEEECCCCCHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHH QATNQCTQSWMSGVPHRRLAKLNQDQSAVHLLPKEEDGFELTIPLELLNEAPSDADDPVR HHHHHHHHHHHCCCCHHHHHHCCCCCCEEEECCCCCCCCEEEEEHHHHCCCCCCCCCCEE VGLTTIQLFDLVEALDQLLADQQTLPNLSLAVRPLSRSEAASGQALQKSTSAVLGAASVA HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHH IAASIFYLLPVPKASPPPKDPPKTAPTSTESPAPGTAPPGVPPIQVSPSPEESPAASPSP HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC ENTEASPSPEASPEPEESP CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TIQRPFILPNCTLNLEGISNSITDAALGESLDVLLRLECQFGDLKKPLIGGLDLLNSLI CCCCCEECCCCEEEECCCCCHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHH QATNQCTQSWMSGVPHRRLAKLNQDQSAVHLLPKEEDGFELTIPLELLNEAPSDADDPVR HHHHHHHHHHHCCCCHHHHHHCCCCCCEEEECCCCCCCCEEEEEHHHHCCCCCCCCCCEE VGLTTIQLFDLVEALDQLLADQQTLPNLSLAVRPLSRSEAASGQALQKSTSAVLGAASVA HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHH IAASIFYLLPVPKASPPPKDPPKTAPTSTESPAPGTAPPGVPPIQVSPSPEESPAASPSP HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC ENTEASPSPEASPEPEESP CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA