| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158336068
Identifier: 158336068
GI number: 158336068
Start: 2963159
End: 2964454
Strand: Reverse
Name: 158336068
Synonym: AM1_2928
Alternate gene names: NA
Gene position: 2964454-2963159 (Counterclockwise)
Preceding gene: 158336069
Following gene: 158336063
Centisome position: 45.58
GC content: 49.54
Gene sequence:
>1296_bases ATGTCCCAACACCCTGATTCAAAAAATGATGGCCGCTTAAATCTTGAGCAACAACGCAAGCGCGCTAAAGATATTTTGAA AAAGGCAAAAGCTGGGGATCCTGTATCCATTGATCGCTTTCAGAAATACCATCCGGACTGCCAACCTGGACAGGTCATGT TTATGAATCTGCTGCAATTAGCAGATGCGCAGTTGGTCATTGCTCGAGAAAATCAGTTTTCCAGCTGGTCGCAAATGAAA GCTCACATTGACCAAATGGAATTGATTCGGTCTCAACTGAAAGCCCAGCAACTCCCGCCACCAGATGCTGATTGTTCCAC GCTACATATCCGCTGTGGTTCTGATCTGGAACAGCGTCTACAACAAGCCGGGTTTGTGGGAGATTATTTAGCGTTTACCG ATCCGTTTTGCCAAGGGCCGGTGCAGTCGCTGACCAATCGGTCAGAGTACATTCAACGACGGGCTGAGTTTATGGCCACA GCCTATGAAATGGAACTAGAGGTCATCCACGATCGCCTTCATACTGAATATCATCACCTGCAAGCCAGCCACCGCTACCC TCGAATTCTGTTGTGGTTTGAAGCCGATAGTTATGACCAGCTTAGCCTATCCTACCTATTGCATTATTTTAGGTATGAAT TGGGGGATTCCCAAAAACTAGACTTGATCTGCATTGATTCCTTTCCGGGTATCCGATGTTTTCGGGGTTTGGGGCAGTTA CCCTTAGAAGCCTTGCCGCTGCTTTGGTCCCAACGTCAGCCTGTGACTGCTGAGCAGATGCACTTATGCGATCGCACCTG GCAAGCCTTGACGGCTCCTTCTCCAGAAGATCTGTGGTCCATCGCCACGGAGGATACCTCTCAATTACCTGCTCTTGGCC CTGCACTCCTACGTCACTTACAAGAGCTCCCTTGGGCGGAAGATGGTCTCAGCTTAACGGAACGTCTGACATTGACGATT GTGGCTGAAGGGCCATGCCTGGGTCAGGATCTGTTTCAGATGCTAGTCAATGAGCGAGAGCCACTTCCCTATTTGGGAGA CACCATGTATTGGTTTGTGTTGCAACAACTCCTCAATGGCCCGCATCCACTGCTTACCGTTCAGCCAGAAACCATGGAGT TACCTTGGTCGCAACGCCACTTCGACATTACACCTCTCGGGCTAGCGCTTCTTGCTCAAACGCAACATTGGCGATCGCTA CAAACTTGCGATCGCTGGTTAGGTGGTGTATTAATTCGGCCCAATCAGCCGTGCTGGCAATGGAATCAAACCACTCAAAC GCTTTCTTATGCCTAG
Upstream 100 bases:
>100_bases GTTGTGAGCACCACCACGTTCGCGGAAAGGGCTGCGCCCATCATTAGTTACGCTAAAAACCTTTTCCTGAGGAGCGAACG CAGGTGATTCTCTGAGCTGC
Downstream 100 bases:
>100_bases CCATTGATAAAATGGCCATCTTGAAACCATGCTTCAGCTAGCAATACAGCCATGGATTACTTGAACGATAAGTGGGGGTC TGGGGTACAGCAAGACAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MSQHPDSKNDGRLNLEQQRKRAKDILKKAKAGDPVSIDRFQKYHPDCQPGQVMFMNLLQLADAQLVIARENQFSSWSQMK AHIDQMELIRSQLKAQQLPPPDADCSTLHIRCGSDLEQRLQQAGFVGDYLAFTDPFCQGPVQSLTNRSEYIQRRAEFMAT AYEMELEVIHDRLHTEYHHLQASHRYPRILLWFEADSYDQLSLSYLLHYFRYELGDSQKLDLICIDSFPGIRCFRGLGQL PLEALPLLWSQRQPVTAEQMHLCDRTWQALTAPSPEDLWSIATEDTSQLPALGPALLRHLQELPWAEDGLSLTERLTLTI VAEGPCLGQDLFQMLVNEREPLPYLGDTMYWFVLQQLLNGPHPLLTVQPETMELPWSQRHFDITPLGLALLAQTQHWRSL QTCDRWLGGVLIRPNQPCWQWNQTTQTLSYA
Sequences:
>Translated_431_residues MSQHPDSKNDGRLNLEQQRKRAKDILKKAKAGDPVSIDRFQKYHPDCQPGQVMFMNLLQLADAQLVIARENQFSSWSQMK AHIDQMELIRSQLKAQQLPPPDADCSTLHIRCGSDLEQRLQQAGFVGDYLAFTDPFCQGPVQSLTNRSEYIQRRAEFMAT AYEMELEVIHDRLHTEYHHLQASHRYPRILLWFEADSYDQLSLSYLLHYFRYELGDSQKLDLICIDSFPGIRCFRGLGQL PLEALPLLWSQRQPVTAEQMHLCDRTWQALTAPSPEDLWSIATEDTSQLPALGPALLRHLQELPWAEDGLSLTERLTLTI VAEGPCLGQDLFQMLVNEREPLPYLGDTMYWFVLQQLLNGPHPLLTVQPETMELPWSQRHFDITPLGLALLAQTQHWRSL QTCDRWLGGVLIRPNQPCWQWNQTTQTLSYA >Mature_430_residues SQHPDSKNDGRLNLEQQRKRAKDILKKAKAGDPVSIDRFQKYHPDCQPGQVMFMNLLQLADAQLVIARENQFSSWSQMKA HIDQMELIRSQLKAQQLPPPDADCSTLHIRCGSDLEQRLQQAGFVGDYLAFTDPFCQGPVQSLTNRSEYIQRRAEFMATA YEMELEVIHDRLHTEYHHLQASHRYPRILLWFEADSYDQLSLSYLLHYFRYELGDSQKLDLICIDSFPGIRCFRGLGQLP LEALPLLWSQRQPVTAEQMHLCDRTWQALTAPSPEDLWSIATEDTSQLPALGPALLRHLQELPWAEDGLSLTERLTLTIV AEGPCLGQDLFQMLVNEREPLPYLGDTMYWFVLQQLLNGPHPLLTVQPETMELPWSQRHFDITPLGLALLAQTQHWRSLQ TCDRWLGGVLIRPNQPCWQWNQTTQTLSYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49756; Mature: 49625
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQHPDSKNDGRLNLEQQRKRAKDILKKAKAGDPVSIDRFQKYHPDCQPGQVMFMNLLQL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHH ADAQLVIARENQFSSWSQMKAHIDQMELIRSQLKAQQLPPPDADCSTLHIRCGSDLEQRL CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHH QQAGFVGDYLAFTDPFCQGPVQSLTNRSEYIQRRAEFMATAYEMELEVIHDRLHTEYHHL HHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QASHRYPRILLWFEADSYDQLSLSYLLHYFRYELGDSQKLDLICIDSFPGIRCFRGLGQL HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHCCCC PLEALPLLWSQRQPVTAEQMHLCDRTWQALTAPSPEDLWSIATEDTSQLPALGPALLRHL CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHH QELPWAEDGLSLTERLTLTIVAEGPCLGQDLFQMLVNEREPLPYLGDTMYWFVLQQLLNG HHCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC PHPLLTVQPETMELPWSQRHFDITPLGLALLAQTQHWRSLQTCDRWLGGVLIRPNQPCWQ CCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCC WNQTTQTLSYA CCCCCHHHCCC >Mature Secondary Structure SQHPDSKNDGRLNLEQQRKRAKDILKKAKAGDPVSIDRFQKYHPDCQPGQVMFMNLLQL CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHH ADAQLVIARENQFSSWSQMKAHIDQMELIRSQLKAQQLPPPDADCSTLHIRCGSDLEQRL CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHH QQAGFVGDYLAFTDPFCQGPVQSLTNRSEYIQRRAEFMATAYEMELEVIHDRLHTEYHHL HHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QASHRYPRILLWFEADSYDQLSLSYLLHYFRYELGDSQKLDLICIDSFPGIRCFRGLGQL HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHCCCC PLEALPLLWSQRQPVTAEQMHLCDRTWQALTAPSPEDLWSIATEDTSQLPALGPALLRHL CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHH QELPWAEDGLSLTERLTLTIVAEGPCLGQDLFQMLVNEREPLPYLGDTMYWFVLQQLLNG HHCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC PHPLLTVQPETMELPWSQRHFDITPLGLALLAQTQHWRSLQTCDRWLGGVLIRPNQPCWQ CCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCC WNQTTQTLSYA CCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA