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The map label for this gene is yhdT [H]

Identifier: 158336061

GI number: 158336061

Start: 2954464

End: 2955912

Strand: Direct

Name: yhdT [H]

Synonym: AM1_2921

Alternate gene names: 158336061

Gene position: 2954464-2955912 (Clockwise)

Preceding gene: 158336060

Following gene: 158336064

Centisome position: 45.43

GC content: 47.34

Gene sequence:

>1449_bases
ATGCTTCCCTACTGGGCCCAGCTCAGTACGTCCCGCCTCTCCGATCAATTTTCAGGGCTGAGTGCACCTGAAATTGGATC
ACGGTTATTCGCCATTGCTGCCTTGATTGCCATTAATGGTTTTTTCGTTACAGCTGAGTTTTCCATCGTTGCCGTTCGCC
GCTCCCGCATCAACCAACTCGTGCAAGAGGGAGATACTCAAGCCAAGTTAGTTCAACAACTCCAGCAAGACATTGCTCGA
TTACTTTCAACCACTCAAATTGGGATTACCTTGTCTAGCTTAGCCCTCGGTTGGATCGGAGAACATACCGTAGCTGTGTT
GATTATCTCGTGGTTACGGCAGAGTGCCCTATCTGACTCCACTCAAGTCTTTATCGCCCATACCCTAGCGGTCCCTATCG
CTTTTTTGGTCATTGCTTATCTACAAATCGTCCTAGGAGAGTTATGCCCCAAAGCGCTCGCTCTACTGTACTCCGAACAA
CTCGCTCGATTTTTAGGTCCGACTAGCCTAACGATCGCAAGGCTGTTTAACCCACTTATCTGGATTCTCAACCAATCAAC
CCGATGTTTACTAGGACTGGTGGGTATTGAATATTCAGATCAAGATTGGTACCACCAAGTTACCCCAGAAGAGCTGCAGC
TCATGATTGCAACCTCTACAGAATCCACCGGTTTAGAAGCGGACGAGAGAGAGTTGCTCACCAATGTCTTCGAGTTTACG
GATGTCTTAGTGGAAGAAGTCATGATTCCTCGAACTCGGATTGATTCCTTGGAAGAATCTGCGACGTTTCAAATGCTGCT
AGAAGAGGTCGCCCGGTCCGGGCACAACTACTACCCTGTCATTGGTGAATCCTTGGACGATATTCGCGGCATCGTCCGTT
TCAAAGAGTTAGCGGTTGCTTTTGCTAAAGGAGACCTCCAAAATGACACCTCCATCAGAGCATGGGTACAAACAGCTTGG
TTCGTTCCTGAAGGCACCTTAATCAATGAGGTGCTACAGCTAATGCAGAAATATCACCTCGATATCGTCATGGTGAGGGA
AGAAGAGGTCAATGGGACTGCCGGTTTGGTCACTCTGAATGATCTCGTCCATGAAATCATCGGGGGCGATGATGCAACTG
GTAACGATGCTACACCTCCCATTCAAGAACTCGATAATCATACGTTCATTGTCCAAGCTCAAACCGACTTAGATGAAGTG
AATGAGCAGTTAGGCATAGCGTTACCTATTGTGGATGATTATCAAACCTTGGGAGGGTTTTTACTATTTCAGCTGCAAAA
GCTCCCTCTCCCAGGAGAAGTGCACCACTTGTACGATTTAGAGTTCACTATCATCTCAACCGATGGTCCCCGTCTGGATC
AGATCCAAATCCATCAGTCAGAGTTTGGCATTCGCTCAGATTTACCTACTCATTTGGGTCATCAAACGGATAGCACTCCT
AACCATTAG

Upstream 100 bases:

>100_bases
CCCGGTCACCGATGAGTAAGCGCCTATCTTACATATTCAGTCGATCTCACATCTCCAATAGAGGGCTGGCACAATCTCAG
CTGGTATGACTCCACTTCCA

Downstream 100 bases:

>100_bases
AGAAATATTACAGCCTATCGCCCCATAAAAATAAACAAGAAAAAATTCTCGATAACGGTATGTTTACAAATCGTTATCGA
GGACATGAATCTGTCTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MLPYWAQLSTSRLSDQFSGLSAPEIGSRLFAIAALIAINGFFVTAEFSIVAVRRSRINQLVQEGDTQAKLVQQLQQDIAR
LLSTTQIGITLSSLALGWIGEHTVAVLIISWLRQSALSDSTQVFIAHTLAVPIAFLVIAYLQIVLGELCPKALALLYSEQ
LARFLGPTSLTIARLFNPLIWILNQSTRCLLGLVGIEYSDQDWYHQVTPEELQLMIATSTESTGLEADERELLTNVFEFT
DVLVEEVMIPRTRIDSLEESATFQMLLEEVARSGHNYYPVIGESLDDIRGIVRFKELAVAFAKGDLQNDTSIRAWVQTAW
FVPEGTLINEVLQLMQKYHLDIVMVREEEVNGTAGLVTLNDLVHEIIGGDDATGNDATPPIQELDNHTFIVQAQTDLDEV
NEQLGIALPIVDDYQTLGGFLLFQLQKLPLPGEVHHLYDLEFTIISTDGPRLDQIQIHQSEFGIRSDLPTHLGHQTDSTP
NH

Sequences:

>Translated_482_residues
MLPYWAQLSTSRLSDQFSGLSAPEIGSRLFAIAALIAINGFFVTAEFSIVAVRRSRINQLVQEGDTQAKLVQQLQQDIAR
LLSTTQIGITLSSLALGWIGEHTVAVLIISWLRQSALSDSTQVFIAHTLAVPIAFLVIAYLQIVLGELCPKALALLYSEQ
LARFLGPTSLTIARLFNPLIWILNQSTRCLLGLVGIEYSDQDWYHQVTPEELQLMIATSTESTGLEADERELLTNVFEFT
DVLVEEVMIPRTRIDSLEESATFQMLLEEVARSGHNYYPVIGESLDDIRGIVRFKELAVAFAKGDLQNDTSIRAWVQTAW
FVPEGTLINEVLQLMQKYHLDIVMVREEEVNGTAGLVTLNDLVHEIIGGDDATGNDATPPIQELDNHTFIVQAQTDLDEV
NEQLGIALPIVDDYQTLGGFLLFQLQKLPLPGEVHHLYDLEFTIISTDGPRLDQIQIHQSEFGIRSDLPTHLGHQTDSTP
NH
>Mature_482_residues
MLPYWAQLSTSRLSDQFSGLSAPEIGSRLFAIAALIAINGFFVTAEFSIVAVRRSRINQLVQEGDTQAKLVQQLQQDIAR
LLSTTQIGITLSSLALGWIGEHTVAVLIISWLRQSALSDSTQVFIAHTLAVPIAFLVIAYLQIVLGELCPKALALLYSEQ
LARFLGPTSLTIARLFNPLIWILNQSTRCLLGLVGIEYSDQDWYHQVTPEELQLMIATSTESTGLEADERELLTNVFEFT
DVLVEEVMIPRTRIDSLEESATFQMLLEEVARSGHNYYPVIGESLDDIRGIVRFKELAVAFAKGDLQNDTSIRAWVQTAW
FVPEGTLINEVLQLMQKYHLDIVMVREEEVNGTAGLVTLNDLVHEIIGGDDATGNDATPPIQELDNHTFIVQAQTDLDEV
NEQLGIALPIVDDYQTLGGFLLFQLQKLPLPGEVHHLYDLEFTIISTDGPRLDQIQIHQSEFGIRSDLPTHLGHQTDSTP
NH

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=415, Percent_Identity=29.8795180722892, Blast_Score=202, Evalue=5e-52,
Organism=Escherichia coli, GI1790664, Length=436, Percent_Identity=23.6238532110092, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI145693175, Length=425, Percent_Identity=25.4117647058824, Blast_Score=129, Evalue=6e-31,
Organism=Escherichia coli, GI1786879, Length=252, Percent_Identity=28.968253968254, Blast_Score=101, Evalue=9e-23,
Organism=Escherichia coli, GI1788119, Length=235, Percent_Identity=28.5106382978723, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 53667; Mature: 53667

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPYWAQLSTSRLSDQFSGLSAPEIGSRLFAIAALIAINGFFVTAEFSIVAVRRSRINQL
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHH
VQEGDTQAKLVQQLQQDIARLLSTTQIGITLSSLALGWIGEHTVAVLIISWLRQSALSDS
HHCCCHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TQVFIAHTLAVPIAFLVIAYLQIVLGELCPKALALLYSEQLARFLGPTSLTIARLFNPLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
WILNQSTRCLLGLVGIEYSDQDWYHQVTPEELQLMIATSTESTGLEADERELLTNVFEFT
HHHCCCCHHHHHEECCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHH
DVLVEEVMIPRTRIDSLEESATFQMLLEEVARSGHNYYPVIGESLDDIRGIVRFKELAVA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
FAKGDLQNDTSIRAWVQTAWFVPEGTLINEVLQLMQKYHLDIVMVREEEVNGTAGLVTLN
HHHCCCCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEHH
DLVHEIIGGDDATGNDATPPIQELDNHTFIVQAQTDLDEVNEQLGIALPIVDDYQTLGGF
HHHHHHHCCCCCCCCCCCCCHHHCCCCEEEEEECCCHHHHHHHHCEEEEEHHHHHHHHHH
LLFQLQKLPLPGEVHHLYDLEFTIISTDGPRLDQIQIHQSEFGIRSDLPTHLGHQTDSTP
HHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEHHHCCCCCCCCHHCCCCCCCCC
NH
CC
>Mature Secondary Structure
MLPYWAQLSTSRLSDQFSGLSAPEIGSRLFAIAALIAINGFFVTAEFSIVAVRRSRINQL
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHH
VQEGDTQAKLVQQLQQDIARLLSTTQIGITLSSLALGWIGEHTVAVLIISWLRQSALSDS
HHCCCHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TQVFIAHTLAVPIAFLVIAYLQIVLGELCPKALALLYSEQLARFLGPTSLTIARLFNPLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
WILNQSTRCLLGLVGIEYSDQDWYHQVTPEELQLMIATSTESTGLEADERELLTNVFEFT
HHHCCCCHHHHHEECCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHH
DVLVEEVMIPRTRIDSLEESATFQMLLEEVARSGHNYYPVIGESLDDIRGIVRFKELAVA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
FAKGDLQNDTSIRAWVQTAWFVPEGTLINEVLQLMQKYHLDIVMVREEEVNGTAGLVTLN
HHHCCCCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEHH
DLVHEIIGGDDATGNDATPPIQELDNHTFIVQAQTDLDEVNEQLGIALPIVDDYQTLGGF
HHHHHHHCCCCCCCCCCCCCHHHCCCCEEEEEECCCHHHHHHHHCEEEEEHHHHHHHHHH
LLFQLQKLPLPGEVHHLYDLEFTIISTDGPRLDQIQIHQSEFGIRSDLPTHLGHQTDSTP
HHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEHHHCCCCCCCCHHCCCCCCCCC
NH
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]