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The map label for this gene is dcd [H]

Identifier: 158335999

GI number: 158335999

Start: 2898163

End: 2898759

Strand: Direct

Name: dcd [H]

Synonym: AM1_2857

Alternate gene names: 158335999

Gene position: 2898163-2898759 (Clockwise)

Preceding gene: 158335998

Following gene: 158336002

Centisome position: 44.56

GC content: 51.42

Gene sequence:

>597_bases
GTGATCAAAAATGATGCCTGGATCACCAGGATGGCTAGTCAAGGCATGATTAGCCCTTTTGAACCCCAGCTCGTACGGGA
AGTGGAAGGCAATCCAGGGGTCTCTCAGCGCGTGATTAGCTATGGTCTATCGTCCTATGGCTATGATTTGCGATTGAGTG
CCAACGAATTTCGTGTCTTTCGCCACATCCCTGGCACCATCGTTGATCCCAAGCATTTCAACCCTGCAAATTTAGAACCC
GCAGCCCTGCATACCGATGAGAATGGCAGCTATTTTATCTTGCCAGCCCACTCCTATGGTTTGGGGGTCGCCCTTGAGCG
TTTAGCGGTGCCGGAAAATGTCACGGTCATCTGTATTGGCAAAAGCACCTATGCCCGTATTGGTCTCATCGCCAATTTGA
CTCCCGCCGAAGCTGGCTGGCGGGGCCATTTGACTCTGGAGTTTTCGAATTCATCCAGCGCTGACTGCCGGATTTATGCC
AATGAAGGCATTGTCCAACTGCTCTTTTTTGAAGGCGAGCCCTGCACCGTTAGCTACGAAACCCGGCAAGGGAAATATCA
AGACCAAGAAGAACAGGTCACCCTAGCCAGGTTGTGA

Upstream 100 bases:

>100_bases
ATTTTGACGGGGCCGAATATGCCCTCGTCCCTGATGGATGTCGCCGACCAAATTACTGAGATGCGACGCAGCGTTTGCCC
TTAGTCCTGAAGAGGTTTCT

Downstream 100 bases:

>100_bases
TCCCCGTCGCATTAACGCCGAATCCAGCCATTGATCGTAAAGCGACTGTCGGCAAACTGCTTCGAGGGACAAGTCACTGG
TAACACTTCATGCATATAAC

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MIKNDAWITRMASQGMISPFEPQLVREVEGNPGVSQRVISYGLSSYGYDLRLSANEFRVFRHIPGTIVDPKHFNPANLEP
AALHTDENGSYFILPAHSYGLGVALERLAVPENVTVICIGKSTYARIGLIANLTPAEAGWRGHLTLEFSNSSSADCRIYA
NEGIVQLLFFEGEPCTVSYETRQGKYQDQEEQVTLARL

Sequences:

>Translated_198_residues
MIKNDAWITRMASQGMISPFEPQLVREVEGNPGVSQRVISYGLSSYGYDLRLSANEFRVFRHIPGTIVDPKHFNPANLEP
AALHTDENGSYFILPAHSYGLGVALERLAVPENVTVICIGKSTYARIGLIANLTPAEAGWRGHLTLEFSNSSSADCRIYA
NEGIVQLLFFEGEPCTVSYETRQGKYQDQEEQVTLARL
>Mature_198_residues
MIKNDAWITRMASQGMISPFEPQLVREVEGNPGVSQRVISYGLSSYGYDLRLSANEFRVFRHIPGTIVDPKHFNPANLEP
AALHTDENGSYFILPAHSYGLGVALERLAVPENVTVICIGKSTYARIGLIANLTPAEAGWRGHLTLEFSNSSSADCRIYA
NEGIVQLLFFEGEPCTVSYETRQGKYQDQEEQVTLARL

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:
GO:0006229: Deoxycytidine triphosphate deaminase
GO:0008829: Deoxycytidine triphosphate deaminase
GO:0016787: Deoxycytidine triphosphate deaminase
GO:0046080: Deoxycytidine triphosphate deaminase

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 21967; Mature: 21967

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNDAWITRMASQGMISPFEPQLVREVEGNPGVSQRVISYGLSSYGYDLRLSANEFRVF
CCCCCHHEEEHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEHHHEEEE
RHIPGTIVDPKHFNPANLEPAALHTDENGSYFILPAHSYGLGVALERLAVPENVTVICIG
EECCCCEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEEEC
KSTYARIGLIANLTPAEAGWRGHLTLEFSNSSSADCRIYANEGIVQLLFFEGEPCTVSYE
CCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCEEEEEEECCCCEEEEEE
TRQGKYQDQEEQVTLARL
CCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MIKNDAWITRMASQGMISPFEPQLVREVEGNPGVSQRVISYGLSSYGYDLRLSANEFRVF
CCCCCHHEEEHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEHHHEEEE
RHIPGTIVDPKHFNPANLEPAALHTDENGSYFILPAHSYGLGVALERLAVPENVTVICIG
EECCCCEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEEEC
KSTYARIGLIANLTPAEAGWRGHLTLEFSNSSSADCRIYANEGIVQLLFFEGEPCTVSYE
CCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCEEEEEEECCCCEEEEEE
TRQGKYQDQEEQVTLARL
CCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA