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The map label for this gene is 158335917

Identifier: 158335917

GI number: 158335917

Start: 2808799

End: 2809125

Strand: Reverse

Name: 158335917

Synonym: AM1_2775

Alternate gene names: NA

Gene position: 2809125-2808799 (Counterclockwise)

Preceding gene: 158335918

Following gene: 158335912

Centisome position: 43.19

GC content: 43.73

Gene sequence:

>327_bases
ATGAAATATAAAGGATATGAAGCTGTTATTCAGTTTGATCCTGAAGATCGAATCTTCTTTGGCCGCGTGGTTGGGACTCA
GGATGTGATCGCTTTTGATGGACAAACAGTGGATGAACTAGAAGCCTCTTTCCACAATGTCATTGAAGATTATTTGGCGG
ATTGCCAACGGATGGGCAAAGATCCAGATAAACCTTGCTCTGGCCGCTTCAATTTAAGAATTTCCCCTGAACTCCATCGT
CAAGCTGTCATTCGAGCTCAGGTGGATGGTGTGAGTTTGAATACGTGGGTTGAGACTGCTATCTCAACTCACTTACACCA
CAAGTAA

Upstream 100 bases:

>100_bases
CAGATGTCCTTAAATATTCATTCCCCACATCCAGGGAATGAGTTAAAGCGCTACCAGGTTCAGGCGGTGCGTGATTTTCT
ACTCAAAGCGGGAATAACTG

Downstream 100 bases:

>100_bases
CTCGCTGTAGTGTTTAGGGTTGCAGCACTTCACAATACTGAAATGTCCCTGTTATCCGAGTAATTCGGCGCGTGCCGTGT
TGAAGTCACTACCGTTCAAA

Product: HicB family protein

Products: NA

Alternate protein names: HicB Protein; HicB-Related Protein; Xin-Antitoxin System Antitoxin Component HicB Family; Hif-Contiguous Protein B; Xin-Antitoxin System Protein HicB; HicB Family; HicB-Like Protein; Pilus Related Protein HicB

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MKYKGYEAVIQFDPEDRIFFGRVVGTQDVIAFDGQTVDELEASFHNVIEDYLADCQRMGKDPDKPCSGRFNLRISPELHR
QAVIRAQVDGVSLNTWVETAISTHLHHK

Sequences:

>Translated_108_residues
MKYKGYEAVIQFDPEDRIFFGRVVGTQDVIAFDGQTVDELEASFHNVIEDYLADCQRMGKDPDKPCSGRFNLRISPELHR
QAVIRAQVDGVSLNTWVETAISTHLHHK
>Mature_108_residues
MKYKGYEAVIQFDPEDRIFFGRVVGTQDVIAFDGQTVDELEASFHNVIEDYLADCQRMGKDPDKPCSGRFNLRISPELHR
QAVIRAQVDGVSLNTWVETAISTHLHHK

Specific function: Unknown

COG id: COG4226

COG function: function code S; Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12320; Mature: 12320

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKGYEAVIQFDPEDRIFFGRVVGTQDVIAFDGQTVDELEASFHNVIEDYLADCQRMGK
CCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
DPDKPCSGRFNLRISPELHRQAVIRAQVDGVSLNTWVETAISTHLHHK
CCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKYKGYEAVIQFDPEDRIFFGRVVGTQDVIAFDGQTVDELEASFHNVIEDYLADCQRMGK
CCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
DPDKPCSGRFNLRISPELHRQAVIRAQVDGVSLNTWVETAISTHLHHK
CCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA