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The map label for this gene is yoeB [H]

Identifier: 158335893

GI number: 158335893

Start: 2788612

End: 2788917

Strand: Direct

Name: yoeB [H]

Synonym: AM1_2751

Alternate gene names: 158335893

Gene position: 2788612-2788917 (Clockwise)

Preceding gene: 158335892

Following gene: 158335895

Centisome position: 42.88

GC content: 47.06

Gene sequence:

>306_bases
TTGAGCAAGCGTAAATCCAACATATCGGATCAGCCCCTCACCGTCTTTCGACGATACGCCAATCTATCGCCTCAATTTCG
AGAAGATCTCAAAGCTCTCGCTCAAACCGAACCTAAACTCTACGATCGCACCTGGGTGATCATTGATAATACCCTCGAAG
ATCCGTTTAAGGGCATTGGCAAGCCTGAACCCTTGAAGCATATCGGGAGTGATATTTGGTCTCGCCGCTTATCCCATGAG
CATCGCATCGTCTATGTGGTCAGGGATGAGCGTATTGACTTTATCCAAGCCAAATATCATTACTGA

Upstream 100 bases:

>100_bases
CAAAGACTGTTTGACGGACTGGCCTGGTCAAAAACCCAAGATCAGAATCCACCTGGCGCAGAAGCTGCCGAACAAGCCAT
CGCCCAGTTGAGAGAAGAGA

Downstream 100 bases:

>100_bases
TGAATAGGGTCATATTGATGTGAGCACGATTTGAACATTCAGCCAATGCTAATGGATGGTGATAGACTCAACCACAATAC
GGCTCTGGCTTATCGGCCAA

Product: addiction module antitoxin

Products: NA

Alternate protein names: Endoribonuclease YoeB; Putative mRNA interferase YoeB [H]

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MSKRKSNISDQPLTVFRRYANLSPQFREDLKALAQTEPKLYDRTWVIIDNTLEDPFKGIGKPEPLKHIGSDIWSRRLSHE
HRIVYVVRDERIDFIQAKYHY

Sequences:

>Translated_101_residues
MSKRKSNISDQPLTVFRRYANLSPQFREDLKALAQTEPKLYDRTWVIIDNTLEDPFKGIGKPEPLKHIGSDIWSRRLSHE
HRIVYVVRDERIDFIQAKYHY
>Mature_100_residues
SKRKSNISDQPLTVFRRYANLSPQFREDLKALAQTEPKLYDRTWVIIDNTLEDPFKGIGKPEPLKHIGSDIWSRRLSHEH
RIVYVVRDERIDFIQAKYHY

Specific function: Part of a toxin-antitoxin (TA) module. Has RNase activity and preferentially cleaves at the 3'-end of purine ribonucleotides [H]

COG id: COG4115

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YoeB family [H]

Homologues:

Organism=Escherichia coli, GI87082025, Length=55, Percent_Identity=50.9090909090909, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009614 [H]

Pfam domain/function: PF06769 Plasmid_Txe [H]

EC number: NA

Molecular weight: Translated: 12084; Mature: 11953

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRKSNISDQPLTVFRRYANLSPQFREDLKALAQTEPKLYDRTWVIIDNTLEDPFKGIG
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHCCC
KPEPLKHIGSDIWSRRLSHEHRIVYVVRDERIDFIQAKYHY
CCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCC
>Mature Secondary Structure 
SKRKSNISDQPLTVFRRYANLSPQFREDLKALAQTEPKLYDRTWVIIDNTLEDPFKGIG
CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHCCC
KPEPLKHIGSDIWSRRLSHEHRIVYVVRDERIDFIQAKYHY
CCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]