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The map label for this gene is yjdA [C]

Identifier: 158335863

GI number: 158335863

Start: 2754897

End: 2756966

Strand: Reverse

Name: yjdA [C]

Synonym: AM1_2720

Alternate gene names: 158335863

Gene position: 2756966-2754897 (Counterclockwise)

Preceding gene: 158335867

Following gene: 158335860

Centisome position: 42.39

GC content: 50.87

Gene sequence:

>2070_bases
ATGAGCAATCCTGTCAACGCCTCCCCACCTGCGGGATATTTAGATGATTTTGACCAAGTTCGCCGTGTTCGCGAGCAGGT
TGCCGATCATTTAGATCACATGTCTCAGGGGCTGATTCAATCGGAACTGGACGGTACCAAGGCTTCAGGATCTTTAGGCT
TTGATCGCCAGATCACCTTGGTTAAAACCGCTAGTGATCATCTGCGGCAAGGCGTCTTTCGGTTAGTAGTCTTGGGCGAT
CTCAAACGTGGCAAAAGTACCCTGATCAATGCCATTTTGGGAGAACGACTGCTGCCCAGCGATGTCAACCCTTGTACCGC
CATTTTGAGCGTTCTCAAATATGGCCCCCAGAAGCAAGTCACCATTTATTTTCGTGATGACACCCCACCCCAGCAGATTG
ATGTCGCCACCTTCAAATGGAAATACACCATCGACCCGTCCGAATCCAAAGCGCTACAGGATAAGGATGAGCAAGCCTTT
CCCAATGTCAGTCATGCGGTGATCGAGTATCCCCTGCCTCTCTTAGCCAAAGGAATTGAAATCGTCGATACCCCTGGCTT
AAACGATACAGAAGCCCGTAACGAGCTAGTCCTCAACTATCTCAACGACTGTCATGCGGTGTTATTTGTCCTCAATACCA
CCCAGCCTTGCACCCTCGATGAGCGGCGTTACCTCCGCAACTTTCTCCAGAACCGAGGACTAACGATTTTCTTTCTCCTC
AATGCCTGGGATAAAGTGAAAACCAGTCTGCTCGATCCAGAGGATAAAAGTGCCTTGACCGAGGCAGAAGCAAAGCTCCG
ACAAGTTTTTCAAACCCACCTCTCCCCCTACTGTTCAGTCAATGGCGAAGATCGCTATCAACAGCGGGTCTTTGAAATTT
CAGCGTTGCCCGCGTTAAGGTCACAACTCCACGACCCCAAAGCCTCCCTAGACGAAACGGGTATACCCGCATTTCTCGAT
GCCCTCACCCAGTTTTTAACCCGCGAGCGCACCAATGCTGAGTTAAATCATGCCGTGCATCAAGCTCGGGCCGTGGCGGC
CCATGTCCATGAAGCGGTTGAACGGCGGATTCCCTTGTTAGACGAGGATATCGGTAACCTGAAGGCGAAAGTTGCTTCCG
TCCAAAGTGAGTTCGATCAGCTCGCAACCGTCTCCACGGACTTTCAGACCGAAATTCGCCAAATCCGCGATCGCGAAGCC
CAATCCATTGCCGATTCATTTCGGGCCTATATGCTGCAGCTGGAAAAAACCTTTGAAACGGACTTTGTGGCCTCCCAGCC
CGATCTAGAGTTTTTAGACTTCCTCAACAAACAGAACCGGGCCAAGTTCCATGAATCCTTTAAGCGAGCCTTTGAACGCT
ACCTCACGGATAAATTGGCGGAGTGGGAAATGCAGGCGACCCAGCAATTAGACACGGCTTTTGCTCAGGTGCAAGCCGTT
GCCGACCAATATCAGGCCACCTATACCCAAGTGGTGGAGGTGATTAATGCCAAGCTGTTGGGCCAGTCCTATGGGGCATC
AGGACATCCCTATAATGATGCTGAAACCTGGACCGACACCGTCTTTGAAGTCTTGGATGCCATTCCCAACTCCCTGAATG
GGGTGGTGGGTCGTTTAAGCCCCTTTTGGCGACGGGTGATGCAGGCGGTGTTTACCTCCCTCTGCGTCACCTTGGTGATT
CAAATGGTTGGCTTTTTGTTTTCAGCCATGGCTTTGAATGTGTTTCTAGTGATTGTTGCGGGCGCAGGTCTAGTGGCAGG
GCAAGCTGAATATGTTCGTCAGACCTTCCTGACCACCACTCGCCAAGAATTTGCCAAATGTCTGCCCCAAATTGCCCAAG
AGCAGCAGCAGGCAGTGTATGAAGCTGTCGAGTCTTGCTTTAATACCCACGAAACTGAGATTATTCAGCGATTGAACGAT
GATATTCTGGCTCGCCAAACGGAACTCACCTATTTGGTCACCCAAAAAGAGACTCAAGACATTCAGCTAGAGCAAGAGAC
CGATCGTCTGCAACGGCTAGATCAAGGCATGGCTGAACAAGTCAGCCAGCTAACCGCCCTACTCAATTAG

Upstream 100 bases:

>100_bases
GAATACTGAGAGTCGGTAGCGCCATCAGCCATTGGCTGTCGCTATGATGGTACGGTCAGCGCTCGCTATCTCAGACTTCA
GTCCTTTCAACCGCCAATCC

Downstream 100 bases:

>100_bases
GTGTTGCGTTTCCCTCTAGCGCGATGTCGGGCCATGCTGGTCACTCGATCGGGATGCCCTGAGTTGAACTGCAGCAGCAT
TTGTTGCTTGGGCAGGCGCA

Product: dynamin-like protein

Products: NA

Alternate protein names: ORF6 [H]

Number of amino acids: Translated: 689; Mature: 688

Protein sequence:

>689_residues
MSNPVNASPPAGYLDDFDQVRRVREQVADHLDHMSQGLIQSELDGTKASGSLGFDRQITLVKTASDHLRQGVFRLVVLGD
LKRGKSTLINAILGERLLPSDVNPCTAILSVLKYGPQKQVTIYFRDDTPPQQIDVATFKWKYTIDPSESKALQDKDEQAF
PNVSHAVIEYPLPLLAKGIEIVDTPGLNDTEARNELVLNYLNDCHAVLFVLNTTQPCTLDERRYLRNFLQNRGLTIFFLL
NAWDKVKTSLLDPEDKSALTEAEAKLRQVFQTHLSPYCSVNGEDRYQQRVFEISALPALRSQLHDPKASLDETGIPAFLD
ALTQFLTRERTNAELNHAVHQARAVAAHVHEAVERRIPLLDEDIGNLKAKVASVQSEFDQLATVSTDFQTEIRQIRDREA
QSIADSFRAYMLQLEKTFETDFVASQPDLEFLDFLNKQNRAKFHESFKRAFERYLTDKLAEWEMQATQQLDTAFAQVQAV
ADQYQATYTQVVEVINAKLLGQSYGASGHPYNDAETWTDTVFEVLDAIPNSLNGVVGRLSPFWRRVMQAVFTSLCVTLVI
QMVGFLFSAMALNVFLVIVAGAGLVAGQAEYVRQTFLTTTRQEFAKCLPQIAQEQQQAVYEAVESCFNTHETEIIQRLND
DILARQTELTYLVTQKETQDIQLEQETDRLQRLDQGMAEQVSQLTALLN

Sequences:

>Translated_689_residues
MSNPVNASPPAGYLDDFDQVRRVREQVADHLDHMSQGLIQSELDGTKASGSLGFDRQITLVKTASDHLRQGVFRLVVLGD
LKRGKSTLINAILGERLLPSDVNPCTAILSVLKYGPQKQVTIYFRDDTPPQQIDVATFKWKYTIDPSESKALQDKDEQAF
PNVSHAVIEYPLPLLAKGIEIVDTPGLNDTEARNELVLNYLNDCHAVLFVLNTTQPCTLDERRYLRNFLQNRGLTIFFLL
NAWDKVKTSLLDPEDKSALTEAEAKLRQVFQTHLSPYCSVNGEDRYQQRVFEISALPALRSQLHDPKASLDETGIPAFLD
ALTQFLTRERTNAELNHAVHQARAVAAHVHEAVERRIPLLDEDIGNLKAKVASVQSEFDQLATVSTDFQTEIRQIRDREA
QSIADSFRAYMLQLEKTFETDFVASQPDLEFLDFLNKQNRAKFHESFKRAFERYLTDKLAEWEMQATQQLDTAFAQVQAV
ADQYQATYTQVVEVINAKLLGQSYGASGHPYNDAETWTDTVFEVLDAIPNSLNGVVGRLSPFWRRVMQAVFTSLCVTLVI
QMVGFLFSAMALNVFLVIVAGAGLVAGQAEYVRQTFLTTTRQEFAKCLPQIAQEQQQAVYEAVESCFNTHETEIIQRLND
DILARQTELTYLVTQKETQDIQLEQETDRLQRLDQGMAEQVSQLTALLN
>Mature_688_residues
SNPVNASPPAGYLDDFDQVRRVREQVADHLDHMSQGLIQSELDGTKASGSLGFDRQITLVKTASDHLRQGVFRLVVLGDL
KRGKSTLINAILGERLLPSDVNPCTAILSVLKYGPQKQVTIYFRDDTPPQQIDVATFKWKYTIDPSESKALQDKDEQAFP
NVSHAVIEYPLPLLAKGIEIVDTPGLNDTEARNELVLNYLNDCHAVLFVLNTTQPCTLDERRYLRNFLQNRGLTIFFLLN
AWDKVKTSLLDPEDKSALTEAEAKLRQVFQTHLSPYCSVNGEDRYQQRVFEISALPALRSQLHDPKASLDETGIPAFLDA
LTQFLTRERTNAELNHAVHQARAVAAHVHEAVERRIPLLDEDIGNLKAKVASVQSEFDQLATVSTDFQTEIRQIRDREAQ
SIADSFRAYMLQLEKTFETDFVASQPDLEFLDFLNKQNRAKFHESFKRAFERYLTDKLAEWEMQATQQLDTAFAQVQAVA
DQYQATYTQVVEVINAKLLGQSYGASGHPYNDAETWTDTVFEVLDAIPNSLNGVVGRLSPFWRRVMQAVFTSLCVTLVIQ
MVGFLFSAMALNVFLVIVAGAGLVAGQAEYVRQTFLTTTRQEFAKCLPQIAQEQQQAVYEAVESCFNTHETEIIQRLNDD
ILARQTELTYLVTQKETQDIQLEQETDRLQRLDQGMAEQVSQLTALLN

Specific function: Belongs To An Operon Involved In Alkylphosphonate Uptake And C-P Lyase. Exact Function Not Known. [C]

COG id: COG0699

COG function: function code R; Predicted GTPases (dynamin-related)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.genitalium MG148 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001401 [H]

Pfam domain/function: PF00350 Dynamin_N [H]

EC number: NA

Molecular weight: Translated: 77805; Mature: 77674

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPVNASPPAGYLDDFDQVRRVREQVADHLDHMSQGLIQSELDGTKASGSLGFDRQITL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
VKTASDHLRQGVFRLVVLGDLKRGKSTLINAILGERLLPSDVNPCTAILSVLKYGPQKQV
EECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEE
TIYFRDDTPPQQIDVATFKWKYTIDPSESKALQDKDEQAFPNVSHAVIEYPLPLLAKGIE
EEEECCCCCCCCEEEEEEEEEEEECCCHHHHHCCCCHHHCCCHHHHHHHCCHHHHHCCCC
IVDTPGLNDTEARNELVLNYLNDCHAVLFVLNTTQPCTLDERRYLRNFLQNRGLTIFFLL
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEH
NAWDKVKTSLLDPEDKSALTEAEAKLRQVFQTHLSPYCSVNGEDRYQQRVFEISALPALR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
SQLHDPKASLDETGIPAFLDALTQFLTRERTNAELNHAVHQARAVAAHVHEAVERRIPLL
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
DEDIGNLKAKVASVQSEFDQLATVSTDFQTEIRQIRDREAQSIADSFRAYMLQLEKTFET
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFVASQPDLEFLDFLNKQNRAKFHESFKRAFERYLTDKLAEWEMQATQQLDTAFAQVQAV
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADQYQATYTQVVEVINAKLLGQSYGASGHPYNDAETWTDTVFEVLDAIPNSLNGVVGRLS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCC
PFWRRVMQAVFTSLCVTLVIQMVGFLFSAMALNVFLVIVAGAGLVAGQAEYVRQTFLTTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHH
RQEFAKCLPQIAQEQQQAVYEAVESCFNTHETEIIQRLNDDILARQTELTYLVTQKETQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHEEEEECCCCCC
IQLEQETDRLQRLDQGMAEQVSQLTALLN
CHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNPVNASPPAGYLDDFDQVRRVREQVADHLDHMSQGLIQSELDGTKASGSLGFDRQITL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
VKTASDHLRQGVFRLVVLGDLKRGKSTLINAILGERLLPSDVNPCTAILSVLKYGPQKQV
EECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEE
TIYFRDDTPPQQIDVATFKWKYTIDPSESKALQDKDEQAFPNVSHAVIEYPLPLLAKGIE
EEEECCCCCCCCEEEEEEEEEEEECCCHHHHHCCCCHHHCCCHHHHHHHCCHHHHHCCCC
IVDTPGLNDTEARNELVLNYLNDCHAVLFVLNTTQPCTLDERRYLRNFLQNRGLTIFFLL
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEH
NAWDKVKTSLLDPEDKSALTEAEAKLRQVFQTHLSPYCSVNGEDRYQQRVFEISALPALR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
SQLHDPKASLDETGIPAFLDALTQFLTRERTNAELNHAVHQARAVAAHVHEAVERRIPLL
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
DEDIGNLKAKVASVQSEFDQLATVSTDFQTEIRQIRDREAQSIADSFRAYMLQLEKTFET
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFVASQPDLEFLDFLNKQNRAKFHESFKRAFERYLTDKLAEWEMQATQQLDTAFAQVQAV
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADQYQATYTQVVEVINAKLLGQSYGASGHPYNDAETWTDTVFEVLDAIPNSLNGVVGRLS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCC
PFWRRVMQAVFTSLCVTLVIQMVGFLFSAMALNVFLVIVAGAGLVAGQAEYVRQTFLTTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHH
RQEFAKCLPQIAQEQQQAVYEAVESCFNTHETEIIQRLNDDILARQTELTYLVTQKETQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHEEEEECCCCCC
IQLEQETDRLQRLDQGMAEQVSQLTALLN
CHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8920183 [H]