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The map label for this gene is arnC [H]

Identifier: 158335841

GI number: 158335841

Start: 2730986

End: 2731990

Strand: Reverse

Name: arnC [H]

Synonym: AM1_2699

Alternate gene names: 158335841

Gene position: 2731990-2730986 (Counterclockwise)

Preceding gene: 158335854

Following gene: 158335836

Centisome position: 42.01

GC content: 46.67

Gene sequence:

>1005_bases
ATGAAATTACCCATGCTAATGCAAGACCAAAAAGCCAAGATCACTCAGCCCGAAATCTCGGTCATTATACCCATCTATAA
TGAGGTCGAAAGCCTGGAGCATCTCATTCGTAGGATTTCAGATACCCTGGATGAAACGCATGTATCCTACGAAATCATTT
GTGTCGATGATGGCTCGGTGGATGGTACGACCGAGTTGTTAAGGAAACAGGTGGATCTATACCCCCAGCTACGGGGAGTT
GTGTTGCGCCGAAATTATGGACAAACGGCGGCTATGTCCGCAGGGTTCAACCATGCCCAAGGTAAGATTTTTGTCACCCT
GGATGGTGACTTGCAAAATGAGCCAGCCGATATTCCGCTACTGCTGGCCAAAATGAGTGAAGGCTTTGATTTAGTCAGTG
GTTGGCGGAAAGAGCGACAAGATGCCGCATTGACGCGCCTGCTCCCATCTAAGATTGCTAACTTGGTGATTGGGTGGATT
ACAGGGGTTAAGCTGAACGACTATGGTTGTTCTCTGAAGGCTTATCGAGCAGAGCTGATTGCTGATATGAACCTGTATGG
AGAATTACACCGATTTTTACCAGCATTAGCTTTTATTGAAGGTGCCAGAATTGCAGAGCTGCCTGTACGCCATCATGCTC
GTCAATTTGGCCAAAGTAAGTATGGCCTGGATCGGACCTTTCGGGTCGTCATGGATTTGCTAACCGTCTCTTTTATGAAA
ACCTTTTTAACCCGTCCTATGCATGTCTTTGGACTGTTGGGGATTACCTTTACTGGGTTAGGAGTATTAACAGGCGGCTA
CTTAGTATTTTTAAAGTACGGCCTCAACGAAGGAATTGCAGATCGTCCCTTGCTGATCTTATCTGCTGTGTTGCTATTGA
CTGGAATTCAACTTTTTTCCATCGGGCTCCTGGCTGAACTGCTGATGCGAACCTACCATGAGTCCCAAAGCCGTCCCATC
TACCGGGTTAGAGAAGTTGTCCAAGCATCCAATTCTGAGAATTGA

Upstream 100 bases:

>100_bases
TTTATCTTCGTCGGTAAGTTGCAAAAAATGCTTTAAATACCGTTCTTGGCAGTTTTCTTGAATGAAATCCTCTGAAGTGA
GTTAATGAATAGCGAGTGAG

Downstream 100 bases:

>100_bases
AGCGTCGGGTAACCCTCATATCTAGCGGTTGAAACGGATCAATAATCGTGCCAAAGCCAGAGTGTATAGGATCTGGGAAG
TGCCAATAACATAGCCCTCA

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKLPMLMQDQKAKITQPEISVIIPIYNEVESLEHLIRRISDTLDETHVSYEIICVDDGSVDGTTELLRKQVDLYPQLRGV
VLRRNYGQTAAMSAGFNHAQGKIFVTLDGDLQNEPADIPLLLAKMSEGFDLVSGWRKERQDAALTRLLPSKIANLVIGWI
TGVKLNDYGCSLKAYRAELIADMNLYGELHRFLPALAFIEGARIAELPVRHHARQFGQSKYGLDRTFRVVMDLLTVSFMK
TFLTRPMHVFGLLGITFTGLGVLTGGYLVFLKYGLNEGIADRPLLILSAVLLLTGIQLFSIGLLAELLMRTYHESQSRPI
YRVREVVQASNSEN

Sequences:

>Translated_334_residues
MKLPMLMQDQKAKITQPEISVIIPIYNEVESLEHLIRRISDTLDETHVSYEIICVDDGSVDGTTELLRKQVDLYPQLRGV
VLRRNYGQTAAMSAGFNHAQGKIFVTLDGDLQNEPADIPLLLAKMSEGFDLVSGWRKERQDAALTRLLPSKIANLVIGWI
TGVKLNDYGCSLKAYRAELIADMNLYGELHRFLPALAFIEGARIAELPVRHHARQFGQSKYGLDRTFRVVMDLLTVSFMK
TFLTRPMHVFGLLGITFTGLGVLTGGYLVFLKYGLNEGIADRPLLILSAVLLLTGIQLFSIGLLAELLMRTYHESQSRPI
YRVREVVQASNSEN
>Mature_334_residues
MKLPMLMQDQKAKITQPEISVIIPIYNEVESLEHLIRRISDTLDETHVSYEIICVDDGSVDGTTELLRKQVDLYPQLRGV
VLRRNYGQTAAMSAGFNHAQGKIFVTLDGDLQNEPADIPLLLAKMSEGFDLVSGWRKERQDAALTRLLPSKIANLVIGWI
TGVKLNDYGCSLKAYRAELIADMNLYGELHRFLPALAFIEGARIAELPVRHHARQFGQSKYGLDRTFRVVMDLLTVSFMK
TFLTRPMHVFGLLGITFTGLGVLTGGYLVFLKYGLNEGIADRPLLILSAVLLLTGIQLFSIGLLAELLMRTYHESQSRPI
YRVREVVQASNSEN

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=242, Percent_Identity=30.1652892561983, Blast_Score=93, Evalue=3e-19,
Organism=Escherichia coli, GI1788588, Length=319, Percent_Identity=38.5579937304075, Blast_Score=211, Evalue=4e-56,
Organism=Escherichia coli, GI1788692, Length=310, Percent_Identity=24.1935483870968, Blast_Score=111, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI71999402, Length=223, Percent_Identity=31.8385650224215, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24585265, Length=228, Percent_Identity=28.9473684210526, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 37465; Mature: 37465

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPMLMQDQKAKITQPEISVIIPIYNEVESLEHLIRRISDTLDETHVSYEIICVDDGSV
CCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCC
DGTTELLRKQVDLYPQLRGVVLRRNYGQTAAMSAGFNHAQGKIFVTLDGDLQNEPADIPL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHH
LLAKMSEGFDLVSGWRKERQDAALTRLLPSKIANLVIGWITGVKLNDYGCSLKAYRAELI
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHH
ADMNLYGELHRFLPALAFIEGARIAELPVRHHARQFGQSKYGLDRTFRVVMDLLTVSFMK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHH
TFLTRPMHVFGLLGITFTGLGVLTGGYLVFLKYGLNEGIADRPLLILSAVLLLTGIQLFS
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
IGLLAELLMRTYHESQSRPIYRVREVVQASNSEN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLPMLMQDQKAKITQPEISVIIPIYNEVESLEHLIRRISDTLDETHVSYEIICVDDGSV
CCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCC
DGTTELLRKQVDLYPQLRGVVLRRNYGQTAAMSAGFNHAQGKIFVTLDGDLQNEPADIPL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHH
LLAKMSEGFDLVSGWRKERQDAALTRLLPSKIANLVIGWITGVKLNDYGCSLKAYRAELI
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHH
ADMNLYGELHRFLPALAFIEGARIAELPVRHHARQFGQSKYGLDRTFRVVMDLLTVSFMK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHH
TFLTRPMHVFGLLGITFTGLGVLTGGYLVFLKYGLNEGIADRPLLILSAVLLLTGIQLFS
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
IGLLAELLMRTYHESQSRPIYRVREVVQASNSEN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA