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The map label for this gene is ndh [H]

Identifier: 158335839

GI number: 158335839

Start: 2728836

End: 2730029

Strand: Direct

Name: ndh [H]

Synonym: AM1_2697

Alternate gene names: 158335839

Gene position: 2728836-2730029 (Clockwise)

Preceding gene: 158335838

Following gene: 158335840

Centisome position: 41.96

GC content: 48.58

Gene sequence:

>1194_bases
ATGACTGAACATCAGCCAACAATTTGTATTTTAGGAGGTGGCTTTGGCGGTCTCTATACAGCTCTTCGCTTAAGTCAACT
GCCATGGGATGAACAACAACCACTCATATATCTAGTGGATCAAAATGATCATTTTTTGTTTTCGCCATTACTTTATGAAC
TGGTTACAGGAGAACTACAGTCTTGGGAAATTGCTCCGCCTTACAGCGAGCTTTTAGCCAATACTGAGGTGCGTTTTATT
CAAAGTGCTGTTAAAGAGATTGATGTTGCCCAACAGCAGGTTACCTTATCTGATCAGTCCATCTCTTACGATCGCTTGGT
ACTAGCCCTGGGTGGAGAAACGCCCCTGCACCAAGTTCCTGGATCGGCGGAATATGCGTTGCCGTTTCGGACTGTGCAAG
ACGCCTATCGCCTTGAAGATCGATTACGAACCTTAGAAACCTCCGCAGCACCAAAAATTCGCGTGGCGGTAGTGGGAGCA
GGCCCTAGTGGGGTAGAACTCGCCTGTAAGCTAGCGGATCGCTTAGGTGATCGCGGTCGGATACGGCTGATCGAACGCAA
TAATCAAATTCTCAAATCAGCGCCTGAATTTAATCAAACCGCCGCTCAAAAAGCTCTAGAGAAACGGCAAGTGTGGACTG
ATCTAGAGACGAGTATTGAGTCCCTAGACTCCCATGAAATGACCCTGAGCTATAAGGATAAAACCGATACGCTGCCCGTA
GACTTGGTATTGTGGACGGTGGGCACTGCGATCGCAGCACCGATTCAAGCCTTACCACTCCCTCAAAATGACCTCGGCCA
ACTCTTGACTGACTCCACCCTGCAAGTCCAAGACTCACCCCATATTTTTGCCTTGGGCGACTTAGCAGATTGTCGAGATC
CGCAAGGCAATCCAAATCCTAAAACCGCTCAAGTGGCTATCCAGCAAGCAGATTGTGTGGGGTGGAACCTTTGGGCTTCC
TTAACCCAACGGCCATTGCTGCCGTTTCATTACACCCATCTGGGAGAAATGCTGACCTTAGGAGAAGACTCAGCTGCCAT
GTCTGGGCTGGGATTACAGCTCGATGGCCCTCTAGCCTTTATGGCTCGGCGTTTGATCTATCTCTACCGCATGCCCACCC
TCGATCATCAGCTTAAAATTGGGTTTAATTGGATGTTCAAACCTGTTTTATCCGCACTCAACACAGCTAAATAG

Upstream 100 bases:

>100_bases
ATTTTCTCAAGCCATCTTTGGCGCTTAATGTTCTCCCCCTCCGACTTAAAATCCCTTGGTATCCTTAAGACATCTAGATC
TTCCTGGGAAGGGTGACTGC

Downstream 100 bases:

>100_bases
AAGCCATCCAGTAAGTCTCTACAAGCAAGACCGGGAAGCAAATAAGAACCGTTCTTAGTTTGCGGTATAGTGATTGGGGT
GTAACTGGATTTATACCGTA

Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MTEHQPTICILGGGFGGLYTALRLSQLPWDEQQPLIYLVDQNDHFLFSPLLYELVTGELQSWEIAPPYSELLANTEVRFI
QSAVKEIDVAQQQVTLSDQSISYDRLVLALGGETPLHQVPGSAEYALPFRTVQDAYRLEDRLRTLETSAAPKIRVAVVGA
GPSGVELACKLADRLGDRGRIRLIERNNQILKSAPEFNQTAAQKALEKRQVWTDLETSIESLDSHEMTLSYKDKTDTLPV
DLVLWTVGTAIAAPIQALPLPQNDLGQLLTDSTLQVQDSPHIFALGDLADCRDPQGNPNPKTAQVAIQQADCVGWNLWAS
LTQRPLLPFHYTHLGEMLTLGEDSAAMSGLGLQLDGPLAFMARRLIYLYRMPTLDHQLKIGFNWMFKPVLSALNTAK

Sequences:

>Translated_397_residues
MTEHQPTICILGGGFGGLYTALRLSQLPWDEQQPLIYLVDQNDHFLFSPLLYELVTGELQSWEIAPPYSELLANTEVRFI
QSAVKEIDVAQQQVTLSDQSISYDRLVLALGGETPLHQVPGSAEYALPFRTVQDAYRLEDRLRTLETSAAPKIRVAVVGA
GPSGVELACKLADRLGDRGRIRLIERNNQILKSAPEFNQTAAQKALEKRQVWTDLETSIESLDSHEMTLSYKDKTDTLPV
DLVLWTVGTAIAAPIQALPLPQNDLGQLLTDSTLQVQDSPHIFALGDLADCRDPQGNPNPKTAQVAIQQADCVGWNLWAS
LTQRPLLPFHYTHLGEMLTLGEDSAAMSGLGLQLDGPLAFMARRLIYLYRMPTLDHQLKIGFNWMFKPVLSALNTAK
>Mature_396_residues
TEHQPTICILGGGFGGLYTALRLSQLPWDEQQPLIYLVDQNDHFLFSPLLYELVTGELQSWEIAPPYSELLANTEVRFIQ
SAVKEIDVAQQQVTLSDQSISYDRLVLALGGETPLHQVPGSAEYALPFRTVQDAYRLEDRLRTLETSAAPKIRVAVVGAG
PSGVELACKLADRLGDRGRIRLIERNNQILKSAPEFNQTAAQKALEKRQVWTDLETSIESLDSHEMTLSYKDKTDTLPVD
LVLWTVGTAIAAPIQALPLPQNDLGQLLTDSTLQVQDSPHIFALGDLADCRDPQGNPNPKTAQVAIQQADCVGWNLWASL
TQRPLLPFHYTHLGEMLTLGEDSAAMSGLGLQLDGPLAFMARRLIYLYRMPTLDHQLKIGFNWMFKPVLSALNTAK

Specific function: Transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. Does not couple the redox reaction to proton translocation [H]

COG id: COG1252

COG function: function code C; NADH dehydrogenase, FAD-containing subunit

Gene ontology:

Cell location: Cell membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADH dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1787352, Length=430, Percent_Identity=30.6976744186047, Blast_Score=137, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6323794, Length=449, Percent_Identity=22.71714922049, Blast_Score=70, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6323515, Length=468, Percent_Identity=23.5042735042735, Blast_Score=70, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6320118, Length=444, Percent_Identity=22.0720720720721, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR001327 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =1.6.99.3 [H]

Molecular weight: Translated: 44024; Mature: 43893

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00283 SOYBEAN_KUNITZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEHQPTICILGGGFGGLYTALRLSQLPWDEQQPLIYLVDQNDHFLFSPLLYELVTGELQ
CCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHCCCC
SWEIAPPYSELLANTEVRFIQSAVKEIDVAQQQVTLSDQSISYDRLVLALGGETPLHQVP
CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCHHHCC
GSAEYALPFRTVQDAYRLEDRLRTLETSAAPKIRVAVVGAGPSGVELACKLADRLGDRGR
CCCCEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCE
IRLIERNNQILKSAPEFNQTAAQKALEKRQVWTDLETSIESLDSHEMTLSYKDKTDTLPV
EEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCH
DLVLWTVGTAIAAPIQALPLPQNDLGQLLTDSTLQVQDSPHIFALGDLADCRDPQGNPNP
HHHHHHHHHHHHCCHHHCCCCCHHHHHHHCCCEEEEECCCCEEEECCCHHCCCCCCCCCC
KTAQVAIQQADCVGWNLWASLTQRPLLPFHYTHLGEMLTLGEDSAAMSGLGLQLDGPLAF
CHHEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHCCCCEEECCHHHH
MARRLIYLYRMPTLDHQLKIGFNWMFKPVLSALNTAK
HHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TEHQPTICILGGGFGGLYTALRLSQLPWDEQQPLIYLVDQNDHFLFSPLLYELVTGELQ
CCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHCCCC
SWEIAPPYSELLANTEVRFIQSAVKEIDVAQQQVTLSDQSISYDRLVLALGGETPLHQVP
CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCHHHCC
GSAEYALPFRTVQDAYRLEDRLRTLETSAAPKIRVAVVGAGPSGVELACKLADRLGDRGR
CCCCEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCE
IRLIERNNQILKSAPEFNQTAAQKALEKRQVWTDLETSIESLDSHEMTLSYKDKTDTLPV
EEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCH
DLVLWTVGTAIAAPIQALPLPQNDLGQLLTDSTLQVQDSPHIFALGDLADCRDPQGNPNP
HHHHHHHHHHHHCCHHHCCCCCHHHHHHHCCCEEEEECCCCEEEECCCHHCCCCCCCCCC
KTAQVAIQQADCVGWNLWASLTQRPLLPFHYTHLGEMLTLGEDSAAMSGLGLQLDGPLAF
CHHEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHCCCCEEECCHHHH
MARRLIYLYRMPTLDHQLKIGFNWMFKPVLSALNTAK
HHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6265208; 8905232; 9278503 [H]