| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is yjeK [C]
Identifier: 158335745
GI number: 158335745
Start: 2636011
End: 2637150
Strand: Reverse
Name: yjeK [C]
Synonym: AM1_2596
Alternate gene names: 158335745
Gene position: 2637150-2636011 (Counterclockwise)
Preceding gene: 158335749
Following gene: 158335744
Centisome position: 40.55
GC content: 54.04
Gene sequence:
>1140_bases ATGACATTATCGACGCCTAAGCGCCTGGCCTGGCGGGATGAACTCAAAGCGAGTCTACAGTTTTCGCAAACGGCGGCAAC GACCTTACCTCTGGGAGAGGAAGACTGCGATCGCATCACTGCTGCCCAAACCCATTTTCCCTTTATGGTGCCGGAGGGCT ATGCCCAACTGATTGATTGGCAAGACCCCACCGATCCGCTGCGACAGCTGCTCTTACCGTCGGTCTATGAACAGGATGAC CACGGCTCTCTTGATACCAGTGGCGAAACCTTATCGACGGTGGTGCCTGGATTACAGCATAAGTACGAACAGACCGCCGT TTTGATTGTCACCCAAGCCTGTGCGGGACATTGCCGCTATTGCTTTCGTCGCCGCCTAATGAGCAAAGATGTGATGACCA AGGAAACCATTGAGGATTTGCAGGGTGCGATCGCATATATTCAAACCCATCCTGAAATTGACAATGTGCTGATGTCCGGG GGCGACCCAATGGTGTCCAGTACCCGCCGTCTGGCCAATTTGCTGGCAGCCCTGGCCGAGATTCCCCATCTCTGGCAAAT TCGGATCAGCACCAAACTACCCGCCTTTCTTCCCAGCCGCTTTACTTCTGATCCGGAGTTGCTGCAAGTGTTGGCCCAGT ATCAAGAGCGATTCCAAATTGTTTTTCAGTGCCACTTCGATCACCCTCGCGAAATCACCCCAGCCGCAGAACAGGCCCTA GCGGTTTTGCGAAACGCAGGCTGTCTGCTTACGGCTCAAATTCCCCTGATGCAAGGGGTCAACAGTTCCGTCGATGTGAT GGAAACCTTATTTAAGCGACTGCATCGCCTCAGCGTCCTGCCTCAATATCTCTTCCATCCGCGCCCGGTTAAACATGCCC TCCATTTTCAACTGCCAATTCTGGAGGGACTCAAGCTAGTCGAAGGACTGCGCCAACGCTGCAATGGCTCCGTTAAGCGA TTTCGCTATATCCTCACCCATGAACACGGCAAGCTAGAACTCGTCGGACTCACCCCTGGTCCTGAACCACAGCTGATCGG TCGCTGGCACCAGCGGCGGCGGGGCAATGATTATCCTGACATTCTGTTTTTGCCGATTGATCCGCAAACGATGTGGCTAC CGGATGCTCTCCCACCATGA
Upstream 100 bases:
>100_bases GCTCCATTGTTGTTAGGGCATCAGTTGTTAGGGCATTATTGTAAACCGAGGATCTGATGTGTGCCTGATCCTCAAAGATT TATCTGGGGAATGTGAGGGG
Downstream 100 bases:
>100_bases AGATTGGCCTCCTGTTTGACTCCCAAGCGGAGCTGATGGCTGCACCAGAGGCCCAAGTCAACACCCACTACCATTGGCGC GAACCGGAAGAAGTGGTTGC
Product: lysine 2,3-aminomutase YodO family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MTLSTPKRLAWRDELKASLQFSQTAATTLPLGEEDCDRITAAQTHFPFMVPEGYAQLIDWQDPTDPLRQLLLPSVYEQDD HGSLDTSGETLSTVVPGLQHKYEQTAVLIVTQACAGHCRYCFRRRLMSKDVMTKETIEDLQGAIAYIQTHPEIDNVLMSG GDPMVSSTRRLANLLAALAEIPHLWQIRISTKLPAFLPSRFTSDPELLQVLAQYQERFQIVFQCHFDHPREITPAAEQAL AVLRNAGCLLTAQIPLMQGVNSSVDVMETLFKRLHRLSVLPQYLFHPRPVKHALHFQLPILEGLKLVEGLRQRCNGSVKR FRYILTHEHGKLELVGLTPGPEPQLIGRWHQRRRGNDYPDILFLPIDPQTMWLPDALPP
Sequences:
>Translated_379_residues MTLSTPKRLAWRDELKASLQFSQTAATTLPLGEEDCDRITAAQTHFPFMVPEGYAQLIDWQDPTDPLRQLLLPSVYEQDD HGSLDTSGETLSTVVPGLQHKYEQTAVLIVTQACAGHCRYCFRRRLMSKDVMTKETIEDLQGAIAYIQTHPEIDNVLMSG GDPMVSSTRRLANLLAALAEIPHLWQIRISTKLPAFLPSRFTSDPELLQVLAQYQERFQIVFQCHFDHPREITPAAEQAL AVLRNAGCLLTAQIPLMQGVNSSVDVMETLFKRLHRLSVLPQYLFHPRPVKHALHFQLPILEGLKLVEGLRQRCNGSVKR FRYILTHEHGKLELVGLTPGPEPQLIGRWHQRRRGNDYPDILFLPIDPQTMWLPDALPP >Mature_378_residues TLSTPKRLAWRDELKASLQFSQTAATTLPLGEEDCDRITAAQTHFPFMVPEGYAQLIDWQDPTDPLRQLLLPSVYEQDDH GSLDTSGETLSTVVPGLQHKYEQTAVLIVTQACAGHCRYCFRRRLMSKDVMTKETIEDLQGAIAYIQTHPEIDNVLMSGG DPMVSSTRRLANLLAALAEIPHLWQIRISTKLPAFLPSRFTSDPELLQVLAQYQERFQIVFQCHFDHPREITPAAEQALA VLRNAGCLLTAQIPLMQGVNSSVDVMETLFKRLHRLSVLPQYLFHPRPVKHALHFQLPILEGLKLVEGLRQRCNGSVKRF RYILTHEHGKLELVGLTPGPEPQLIGRWHQRRRGNDYPDILFLPIDPQTMWLPDALPP
Specific function: Unknown
COG id: COG1509
COG function: function code E; Lysine 2,3-aminomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the KamA family [H]
Homologues:
Organism=Escherichia coli, GI1790589, Length=321, Percent_Identity=31.4641744548287, Blast_Score=147, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003739 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43024; Mature: 42893
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSTPKRLAWRDELKASLQFSQTAATTLPLGEEDCDRITAAQTHFPFMVPEGYAQLIDW CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCHHHHHCCC QDPTDPLRQLLLPSVYEQDDHGSLDTSGETLSTVVPGLQHKYEQTAVLIVTQACAGHCRY CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHH CFRRRLMSKDVMTKETIEDLQGAIAYIQTHPEIDNVLMSGGDPMVSSTRRLANLLAALAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH IPHLWQIRISTKLPAFLPSRFTSDPELLQVLAQYQERFQIVFQCHFDHPREITPAAEQAL CCCEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHH AVLRNAGCLLTAQIPLMQGVNSSVDVMETLFKRLHRLSVLPQYLFHPRPVKHALHFQLPI HHHHCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHH LEGLKLVEGLRQRCNGSVKRFRYILTHEHGKLELVGLTPGPEPQLIGRWHQRRRGNDYPD HHHHHHHHHHHHHHCCHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCC ILFLPIDPQTMWLPDALPP EEEEECCCCCEECCCCCCC >Mature Secondary Structure TLSTPKRLAWRDELKASLQFSQTAATTLPLGEEDCDRITAAQTHFPFMVPEGYAQLIDW CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCHHHHHCCC QDPTDPLRQLLLPSVYEQDDHGSLDTSGETLSTVVPGLQHKYEQTAVLIVTQACAGHCRY CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHH CFRRRLMSKDVMTKETIEDLQGAIAYIQTHPEIDNVLMSGGDPMVSSTRRLANLLAALAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH IPHLWQIRISTKLPAFLPSRFTSDPELLQVLAQYQERFQIVFQCHFDHPREITPAAEQAL CCCEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHH AVLRNAGCLLTAQIPLMQGVNSSVDVMETLFKRLHRLSVLPQYLFHPRPVKHALHFQLPI HHHHCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHH LEGLKLVEGLRQRCNGSVKRFRYILTHEHGKLELVGLTPGPEPQLIGRWHQRRRGNDYPD HHHHHHHHHHHHHHCCHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCC ILFLPIDPQTMWLPDALPP EEEEECCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]