| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is ybhG [C]
Identifier: 158335693
GI number: 158335693
Start: 2581007
End: 2582158
Strand: Reverse
Name: ybhG [C]
Synonym: AM1_2543
Alternate gene names: 158335693
Gene position: 2582158-2581007 (Counterclockwise)
Preceding gene: 158335695
Following gene: 158335692
Centisome position: 39.7
GC content: 55.56
Gene sequence:
>1152_bases TTGCCCGTCACCACTCTTTCCCTGCAGCCTTCAACCTCCTATGATATTCAGCGCACCTATGCCGGGGAAGTGCAAGCCAA TCGCACCAGTGAACTGGGGTTTGAGCTGACCGGAACCTTGATCGAAATTGCGGTGGATGAAGGGGATTGGGTACAGCAAG GGATGCCCCTAGCTCGTTTAGATACGCGCAGCCTAGCCGCCCAGCGTCAGCAGCTTTTAGCCCAAAAAGCCCAGGCCCAA GCCCAGTTCCGAGAATTGAAAACTGGACCAAGAACGGAAGAGATTGGGGCGGCTCGGGCAGCAGTGGAGGATTTAGGTCA GCAGCGGTTGCTGGCGGAAAAGCAGAGTAAGCGTCGTCAAGACCTATATAAGCAAGGCGCTATTTCCCGTGAGTCCTTTG AAGAACGATATTTTGCCGCTCAAGCCTTGGAAAAACGTCAGGGCCAAGCTCGGAAGCGGTTAGAAGAACTCTTGGCGGGA ACGCGGGTAGAGCAGGTGGAGTCCCAGTCCGCCCAGCTGGCCGAAATTGATGCCCGTCTAAAAGCCTTAGATATTCAGCG ATCTAAAAGTGTGTTGCGAGCGCCCTTTACGGGACAGGTGGCGCAGCGCCTTATGGATGAAGGGGTGGTCTTAAACGGAG GCCAACCAATTTTGCGGCTGGTGGAAACCTCGAAGATCGAGGCCCGAATTGGCATTCCCCAGGCGATGGCGAGTCGAATG CAGCCCGGTCAGACCTATCCGGTGCAAGTCGGCGATCAGCGTTATCAGGGGCAGGTAAAAACCCTGCTACCGGAAGTGGA TAACCAAAGCCGAACGGTGATGGCGGTGTTGACCTTACCCAAGGATGCTGCAGTCTCGATGGGGCAAACGGCCAAGCTGG TGTTGGCTCAACGGCAAACTCAACCGGGATTTTGGCTGCCCTCAACGGCGGTGATTGCAGGAGAGCGGGGCCTATGGTCG GCCTCTGTGTTGAAGTCTACAGATCAAGATCAGGTGTTTAGTGTGGCTCGACGCGATCTGGAAGTGCTGCATACGGCGGG CGATCGCATCTATGTTCGCGGCATGCTGAATTCCCAAGAGCAAGTGATTGCCAAAGGCACTCACCGTCTGGCTCCTGGCC AACTGGTCAAAGTTGCCAACACCAAAAACTAG
Upstream 100 bases:
>100_bases ACGGATGCTGGGTTTAGCCGTTTTAGCAGTCGGTGCAGTCACTTTTGGCATCAAAACGTGGGGGACGCCTCAGACTGGCC CCGCTCCCAAACAAGCCATC
Downstream 100 bases:
>100_bases CGCGATACCGAAACGATACCGGGGCTACCATGTTGAACCTGTTCTACCGCAACCGTCAGTTACTGATTCTGTCGATTGCC CTGATTGTGGTGTGGGGCTT
Product: RND family efflux transporter MFP subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MPVTTLSLQPSTSYDIQRTYAGEVQANRTSELGFELTGTLIEIAVDEGDWVQQGMPLARLDTRSLAAQRQQLLAQKAQAQ AQFRELKTGPRTEEIGAARAAVEDLGQQRLLAEKQSKRRQDLYKQGAISRESFEERYFAAQALEKRQGQARKRLEELLAG TRVEQVESQSAQLAEIDARLKALDIQRSKSVLRAPFTGQVAQRLMDEGVVLNGGQPILRLVETSKIEARIGIPQAMASRM QPGQTYPVQVGDQRYQGQVKTLLPEVDNQSRTVMAVLTLPKDAAVSMGQTAKLVLAQRQTQPGFWLPSTAVIAGERGLWS ASVLKSTDQDQVFSVARRDLEVLHTAGDRIYVRGMLNSQEQVIAKGTHRLAPGQLVKVANTKN
Sequences:
>Translated_383_residues MPVTTLSLQPSTSYDIQRTYAGEVQANRTSELGFELTGTLIEIAVDEGDWVQQGMPLARLDTRSLAAQRQQLLAQKAQAQ AQFRELKTGPRTEEIGAARAAVEDLGQQRLLAEKQSKRRQDLYKQGAISRESFEERYFAAQALEKRQGQARKRLEELLAG TRVEQVESQSAQLAEIDARLKALDIQRSKSVLRAPFTGQVAQRLMDEGVVLNGGQPILRLVETSKIEARIGIPQAMASRM QPGQTYPVQVGDQRYQGQVKTLLPEVDNQSRTVMAVLTLPKDAAVSMGQTAKLVLAQRQTQPGFWLPSTAVIAGERGLWS ASVLKSTDQDQVFSVARRDLEVLHTAGDRIYVRGMLNSQEQVIAKGTHRLAPGQLVKVANTKN >Mature_382_residues PVTTLSLQPSTSYDIQRTYAGEVQANRTSELGFELTGTLIEIAVDEGDWVQQGMPLARLDTRSLAAQRQQLLAQKAQAQA QFRELKTGPRTEEIGAARAAVEDLGQQRLLAEKQSKRRQDLYKQGAISRESFEERYFAAQALEKRQGQARKRLEELLAGT RVEQVESQSAQLAEIDARLKALDIQRSKSVLRAPFTGQVAQRLMDEGVVLNGGQPILRLVETSKIEARIGIPQAMASRMQ PGQTYPVQVGDQRYQGQVKTLLPEVDNQSRTVMAVLTLPKDAAVSMGQTAKLVLAQRQTQPGFWLPSTAVIAGERGLWSA SVLKSTDQDQVFSVARRDLEVLHTAGDRIYVRGMLNSQEQVIAKGTHRLAPGQLVKVANTKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0194 family [H]
Homologues:
Organism=Escherichia coli, GI1787013, Length=249, Percent_Identity=28.1124497991968, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 - InterPro: IPR022936 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 42325; Mature: 42194
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTTLSLQPSTSYDIQRTYAGEVQANRTSELGFELTGTLIEIAVDEGDWVQQGMPLARL CCCEEEEECCCCCCCCHHHCCCCCCCCCHHHCCCEEECEEEEEEECCCCHHHHCCCHHHH DTRSLAAQRQQLLAQKAQAQAQFRELKTGPRTEEIGAARAAVEDLGQQRLLAEKQSKRRQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLYKQGAISRESFEERYFAAQALEKRQGQARKRLEELLAGTRVEQVESQSAQLAEIDARL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH KALDIQRSKSVLRAPFTGQVAQRLMDEGVVLNGGQPILRLVETSKIEARIGIPQAMASRM HHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEECCHHHHHHHHHHHHHEECCCHHHHHHHC QPGQTYPVQVGDQRYQGQVKTLLPEVDNQSRTVMAVLTLPKDAAVSMGQTAKLVLAQRQT CCCCCCCEEECCHHHHCHHHHHCCCCCCCCCEEEEEEECCCHHHHCCCCHHHHHHHHHCC QPGFWLPSTAVIAGERGLWSASVLKSTDQDQVFSVARRDLEVLHTAGDRIYVRGMLNSQE CCCCCCCCCEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHH QVIAKGTHRLAPGQLVKVANTKN HHHHHCCCCCCCCCEEECCCCCC >Mature Secondary Structure PVTTLSLQPSTSYDIQRTYAGEVQANRTSELGFELTGTLIEIAVDEGDWVQQGMPLARL CCEEEEECCCCCCCCHHHCCCCCCCCCHHHCCCEEECEEEEEEECCCCHHHHCCCHHHH DTRSLAAQRQQLLAQKAQAQAQFRELKTGPRTEEIGAARAAVEDLGQQRLLAEKQSKRRQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLYKQGAISRESFEERYFAAQALEKRQGQARKRLEELLAGTRVEQVESQSAQLAEIDARL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH KALDIQRSKSVLRAPFTGQVAQRLMDEGVVLNGGQPILRLVETSKIEARIGIPQAMASRM HHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEECCHHHHHHHHHHHHHEECCCHHHHHHHC QPGQTYPVQVGDQRYQGQVKTLLPEVDNQSRTVMAVLTLPKDAAVSMGQTAKLVLAQRQT CCCCCCCEEECCHHHHCHHHHHCCCCCCCCCEEEEEEECCCHHHHCCCCHHHHHHHHHCC QPGFWLPSTAVIAGERGLWSASVLKSTDQDQVFSVARRDLEVLHTAGDRIYVRGMLNSQE CCCCCCCCCEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHH QVIAKGTHRLAPGQLVKVANTKN HHHHHCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA