| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is trx [H]
Identifier: 158335645
GI number: 158335645
Start: 2519258
End: 2519608
Strand: Direct
Name: trx [H]
Synonym: AM1_2495
Alternate gene names: 158335645
Gene position: 2519258-2519608 (Clockwise)
Preceding gene: 158335644
Following gene: 158335646
Centisome position: 38.74
GC content: 49.29
Gene sequence:
>351_bases ATGCTGTCTACGACTAGTACCCAGACTTTCAACCCAGACGTTTTACAATCTGAGACGCCCGTTCTAGTTAGCTTTTGGGC GCCTTGGTGTGGAGTCTGTCGTTGGGTGGAGCCGATGCTGATCCAGGTACAAGCAGATTACGGTTCGGCACTCAAAATTG TCACCATCAATGCCGACGAAAATTTTCTCATTGCCAGCCAATATCGGCTCACGAATATTCCGAGTTTGTTGCTATTCCAG CAGGGCCGTCTGGTTCACCGAATTGACCAGTTTTGCGATCGCACCGAAGCATTGAACTTACTAGAGAAAGCCCTCGGCAA GATTGTTCCATCCCTAATGTCTGCCGGGTAA
Upstream 100 bases:
>100_bases ATTTTGGATTGCCCATCCCTTAATGATGCGTGCAGCATTCAACGTTCGCTGGTAGCATGATCCCAGCTTATAAAATCTCT TGTTTAAAACACCGTTGAGC
Downstream 100 bases:
>100_bases CCTAACTTTACATACCTTAGTGCTCACAACCAAAATTTTCCAAGATATCCCAAATAGTCTTTGGGACTCATATTCGATGG GTTAATCTTAAGATTTCTCA
Product: thioredoxin
Products: NA
Alternate protein names: Trx-1; Thioredoxin-M [H]
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MLSTTSTQTFNPDVLQSETPVLVSFWAPWCGVCRWVEPMLIQVQADYGSALKIVTINADENFLIASQYRLTNIPSLLLFQ QGRLVHRIDQFCDRTEALNLLEKALGKIVPSLMSAG
Sequences:
>Translated_116_residues MLSTTSTQTFNPDVLQSETPVLVSFWAPWCGVCRWVEPMLIQVQADYGSALKIVTINADENFLIASQYRLTNIPSLLLFQ QGRLVHRIDQFCDRTEALNLLEKALGKIVPSLMSAG >Mature_116_residues MLSTTSTQTFNPDVLQSETPVLVSFWAPWCGVCRWVEPMLIQVQADYGSALKIVTINADENFLIASQYRLTNIPSLLLFQ QGRLVHRIDQFCDRTEALNLLEKALGKIVPSLMSAG
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI87082331, Length=80, Percent_Identity=36.25, Blast_Score=75, Evalue=1e-15, Organism=Escherichia coli, GI1788936, Length=72, Percent_Identity=30.5555555555556, Blast_Score=63, Evalue=6e-12,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 12985; Mature: 12985
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSTTSTQTFNPDVLQSETPVLVSFWAPWCGVCRWVEPMLIQVQADYGSALKIVTINADE CCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCEEEEEECCCCCEEEEEEEECCC NFLIASQYRLTNIPSLLLFQQGRLVHRIDQFCDRTEALNLLEKALGKIVPSLMSAG CEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLSTTSTQTFNPDVLQSETPVLVSFWAPWCGVCRWVEPMLIQVQADYGSALKIVTINADE CCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCEEEEEECCCCCEEEEEEEECCC NFLIASQYRLTNIPSLLLFQQGRLVHRIDQFCDRTEALNLLEKALGKIVPSLMSAG CEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2492995 [H]