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The map label for this gene is ycbC [C]

Identifier: 158335605

GI number: 158335605

Start: 2467422

End: 2468207

Strand: Reverse

Name: ycbC [C]

Synonym: AM1_2455

Alternate gene names: 158335605

Gene position: 2468207-2467422 (Counterclockwise)

Preceding gene: 158335606

Following gene: 158335604

Centisome position: 37.95

GC content: 48.47

Gene sequence:

>786_bases
ATGTTTCTATTTCTATCTAAGTTGATCCCTCAACTGATCTATCCAGTGGGGTTGAGTACGGTGCTGTTATTGGTTGCGAT
CGCAACCTTTTGGAAACGTCCCAAAGTCGCTGCTATTTCGGTGGGACTAGCCTTAGGAATCCTCTTCTTTTCCGCGAATG
GTTGGGTAGGAGATGGCTTGCTGTATTCCTTAGAACATCAGTATCCGCCGTTAAAACAGGATGCCACTGCAGATGCAATC
GTGGTGCTGGGAGGATGCACGCGTTCGGCCCATCCTCCCCGACCCTGGGTGGAAGTGTCTGAGGCAGGTGATCGGGTATT
GTACGCGGCCAAACTGTATCGAGAAGGCAAAGCCCCAAAAGTGGTCTTGGCGGGTGGGCGGATTTATTGGAAAGGAGGCG
GCCAAGCAGAAGCGTTGGATATGGCTGAGCTGTTGAAGATTATGGGGGTGCCGGAATCTGCCCTATTGCTTGAGCCTGAT
TCCCTGAATACTTTTGAAAATGCCACTAATGTAAAGCGAGTGTTGAAACAAAATAATATTGATGGCCCTTTATTACTGGT
GACCTCTGCTTTTCACATGCCCCGGTCCATGGCGATTTTTGAAACACAAGGGCTGTCTGTGATTGCGGCTCCCACGGATT
ATCAGGTGACGGAAGTGAATGAGAATGCTGGTTTTTTGGGATTTGTTTTGCGATTACTGCCAGATATTGAAGCGTTAGTA
AACACAACCATAGCGTTTAAGGAATGGATTGGATTTTTGATGTACCGGCTGCGAGGCTGGGCTTAA

Upstream 100 bases:

>100_bases
CGTAATACTGGGAAAGACTTGAAGGATGCTGGGTTTACGCTCAGAGATCCGTCGAGTTGGAAGGGTATGAGACGCTGATG
ATGGTTTGAGTTAGAGGTGT

Downstream 100 bases:

>100_bases
CTTGCCAGGCTAGAGACTGCTGAAGATCTATGATGTTGTGGAGCACAGCTTATTCGTGAAATCCTGATTTGGGTGTCTAG
GCTGTAGGGGGAATGAGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MFLFLSKLIPQLIYPVGLSTVLLLVAIATFWKRPKVAAISVGLALGILFFSANGWVGDGLLYSLEHQYPPLKQDATADAI
VVLGGCTRSAHPPRPWVEVSEAGDRVLYAAKLYREGKAPKVVLAGGRIYWKGGGQAEALDMAELLKIMGVPESALLLEPD
SLNTFENATNVKRVLKQNNIDGPLLLVTSAFHMPRSMAIFETQGLSVIAAPTDYQVTEVNENAGFLGFVLRLLPDIEALV
NTTIAFKEWIGFLMYRLRGWA

Sequences:

>Translated_261_residues
MFLFLSKLIPQLIYPVGLSTVLLLVAIATFWKRPKVAAISVGLALGILFFSANGWVGDGLLYSLEHQYPPLKQDATADAI
VVLGGCTRSAHPPRPWVEVSEAGDRVLYAAKLYREGKAPKVVLAGGRIYWKGGGQAEALDMAELLKIMGVPESALLLEPD
SLNTFENATNVKRVLKQNNIDGPLLLVTSAFHMPRSMAIFETQGLSVIAAPTDYQVTEVNENAGFLGFVLRLLPDIEALV
NTTIAFKEWIGFLMYRLRGWA
>Mature_261_residues
MFLFLSKLIPQLIYPVGLSTVLLLVAIATFWKRPKVAAISVGLALGILFFSANGWVGDGLLYSLEHQYPPLKQDATADAI
VVLGGCTRSAHPPRPWVEVSEAGDRVLYAAKLYREGKAPKVVLAGGRIYWKGGGQAEALDMAELLKIMGVPESALLLEPD
SLNTFENATNVKRVLKQNNIDGPLLLVTSAFHMPRSMAIFETQGLSVIAAPTDYQVTEVNENAGFLGFVLRLLPDIEALV
NTTIAFKEWIGFLMYRLRGWA

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=159, Percent_Identity=31.4465408805031, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 28558; Mature: 28558

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLFLSKLIPQLIYPVGLSTVLLLVAIATFWKRPKVAAISVGLALGILFFSANGWVGDGL
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCE
LYSLEHQYPPLKQDATADAIVVLGGCTRSAHPPRPWVEVSEAGDRVLYAAKLYREGKAPK
EEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCEEHHHHHHHCCCCCE
VVLAGGRIYWKGGGQAEALDMAELLKIMGVPESALLLEPDSLNTFENATNVKRVLKQNNI
EEEECCEEEECCCCCCHHHHHHHHHHHHCCCCHHEEECCCCCCHHHHHHHHHHHHHHCCC
DGPLLLVTSAFHMPRSMAIFETQGLSVIAAPTDYQVTEVNENAGFLGFVLRLLPDIEALV
CCCEEEEEHHHCCCCCEEEEEECCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
NTTIAFKEWIGFLMYRLRGWA
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFLFLSKLIPQLIYPVGLSTVLLLVAIATFWKRPKVAAISVGLALGILFFSANGWVGDGL
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCE
LYSLEHQYPPLKQDATADAIVVLGGCTRSAHPPRPWVEVSEAGDRVLYAAKLYREGKAPK
EEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCEEHHHHHHHCCCCCE
VVLAGGRIYWKGGGQAEALDMAELLKIMGVPESALLLEPDSLNTFENATNVKRVLKQNNI
EEEECCEEEECCCCCCHHHHHHHHHHHHCCCCHHEEECCCCCCHHHHHHHHHHHHHHCCC
DGPLLLVTSAFHMPRSMAIFETQGLSVIAAPTDYQVTEVNENAGFLGFVLRLLPDIEALV
CCCEEEEEHHHCCCCCEEEEEECCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
NTTIAFKEWIGFLMYRLRGWA
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]