Click here to switch to the map view.

The map label for this gene is arcB [C]

Identifier: 158335539

GI number: 158335539

Start: 2391200

End: 2393335

Strand: Reverse

Name: arcB [C]

Synonym: AM1_2387

Alternate gene names: 158335539

Gene position: 2393335-2391200 (Counterclockwise)

Preceding gene: 158335540

Following gene: 158335538

Centisome position: 36.8

GC content: 46.96

Gene sequence:

>2136_bases
GTGAGTAACCTTGAGCAGGATCAAAGACAACGTTTCAGACATCTCTTCATCATTGATGATGCCGAAGGGCGTCGAACCAT
TTCCTTAGAAGCTGCTACTTACTCGATTGGTCGAGATGTTACCAATTCGATTGTGCTGCATTCCAAAATGGTGTCTCGCC
AGCATGCGATTTTGTTGCGAGTTACCGCTCCGGAAACCTCTAATTTTCTCTTCCGAATTATTGACGGTGATTTGCAAGGA
AAACGCAGTACAAACGGCTTGATCGTGAATGGTCGTCGTCTCTTTTCCCATGACCTCAAACATGGAGATGTGGTCATTTT
TGGGGGGGATGTCAAAACCAAATACTTTGTTGTTTCGAATCTATCAGATGCCGATTTTGATAAGTTCTGTGAGGCCACAG
ACTTGTCCATGATTCTGTCACAGTCTGTCAATCCTTTCCAGACCTTGGTTCCGGATGACGCTGACTTGCAGAATATGAGC
GAAGCCTCTCTGGTACGGATGGCGTCTTTCCCTGAGTTAACGCCGAGTCCCATTCTTGAAATGGACCTGCAGGGCACCGT
TACCTATCTCAATCCCGCTGCGGTTATGCAGTTTCCTGATATCTCCAAAGAAGGGGTGGCGCACCCCATGTTGCAGGGAC
TGCTGAAGATGGTGCAAACAGAGCATTCTTCCAAAAGCAACTTCTTTGTTCGGGAAGTAGAAATTGACCAAAATATTTAC
GAACAATCGATTCACTATATTGTTGAAAGTGATTTAGTCCGCAGCTACGTCACTGATATTACAGAGCGTAAGCGGGCGGA
AGAGAAACTCCGACATACGGCCCAGCGAGAATCCATTATCAATCGCATTGTCCAAGCCATGCGGGGAACGATGGTCACCG
CTGAAGTCTTGCAAATTACCGTGGGTCTGTTAACGGAAGCCTTGGGCGCTAGCCATTGTCTAATTGTTCAAATGAATTCA
GATGGTGAATTAGCGGATCATTATGTGAGTGATACTGCTATTGGACGCCAAGATTTAATTCAGGCTAATGAGATGTTTTT
GCGGCATTCTCAAGAGACCTTGGCTCAAGGGCAACAGGTTGTTTTCGCAGATACGAATGACCTCGATCTTGAACTCATTG
CGATTTGTGAGCAATGTAATATTCAAACCCTGCTGATTTCTCCCCTGCAATATTTACAGAACTATTTAGGTAGCATTAGT
CTGTATCATTGCCAGGAAACCACGGAGGAAAGTCTTGCTTTAGAAACTCGAACGTGGAATGCCGATGAACGAGGATTGGT
CAAAACGATTGCGGATCAATGTGCGATCGCAATTCATCAAGCCCAACTTCACCAACATGTCCAAGACTTAAATACCAACC
TGGCTCAACAGGTAGAAGAGCGCACCGCCCAACTCCAACAAAAAATGCGGGAATTGGAGCGTCTCAATAGCCTCAAAGAC
GATTTCTTGAGTACCGTCTCCCATGAATTGCGGACCCCCATGTCCAATATCAAAATGGCGATTCATATGCTCAGTCAGTT
TCCCCTTGAACCTCGGCAACGTCGCTATATCAAAATTCTGGACGCCGAATGTAGTCGAGAGACAGAACTGATCAACGATC
TATTGGATCTGCAACGCCTCGAAGCAGGCGGTAATCAAATCAAGTCGGAACCGATCAAAATCCAAGTATGGTTGCCCCGG
GCTCTCGAACCGTTTCAATCCCGGATTAAAGATCGGGAACTCAATTTACGGGTGAACTGCGACCAAAGCATCCCTACCTT
CCATTCCGATCGCGTTAGCCTCGATCGAATTTTGGCAGAGTTACTCAATAATGCCTGCAAATACACACCCCAAAGTGGCG
AAGTGTCCCTCACCCTCCAGTATCTTGAATTTCCGAAGCCGATGTTGCGTCTGCAAGTGACCAATGAAGCTGAAATTCCA
GAACAGGAACTACCCCGAATTTTTGACAAGTTTTATCGAGTCCCCAATGCCGACCCCTGGAAACAAGGCGGAACGGGTTT
AGGGCTAGCCCTCGTCCAAAAGCTGATTGAACAACTCGAAGGCGAAATCTCTGTGTCCAGTCGCCAGGGAACCACCACCT
TTATCGTCAAGTTACCCTACAAGTCATCTCTCCCCCCCGCAGTCGACGCCAATTAG

Upstream 100 bases:

>100_bases
TGACACAATAGTCAACAGGTGTAATTCAGCAAGCAATAGAGGCATACTACATTCATCTCTCTTTTAACCATTCACCCTAC
CGCGACTGACAGCCCAAATC

Downstream 100 bases:

>100_bases
GTATCTTCAAAAGAGACGTCTTTTTGTGTTGCCTGAATGCCCTCGACTGCTGAATTAATCGCCACCCTACCCGCGCCATT
TCTGGCCAATTTGCAACAGG

Product: two-component sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 711; Mature: 710

Protein sequence:

>711_residues
MSNLEQDQRQRFRHLFIIDDAEGRRTISLEAATYSIGRDVTNSIVLHSKMVSRQHAILLRVTAPETSNFLFRIIDGDLQG
KRSTNGLIVNGRRLFSHDLKHGDVVIFGGDVKTKYFVVSNLSDADFDKFCEATDLSMILSQSVNPFQTLVPDDADLQNMS
EASLVRMASFPELTPSPILEMDLQGTVTYLNPAAVMQFPDISKEGVAHPMLQGLLKMVQTEHSSKSNFFVREVEIDQNIY
EQSIHYIVESDLVRSYVTDITERKRAEEKLRHTAQRESIINRIVQAMRGTMVTAEVLQITVGLLTEALGASHCLIVQMNS
DGELADHYVSDTAIGRQDLIQANEMFLRHSQETLAQGQQVVFADTNDLDLELIAICEQCNIQTLLISPLQYLQNYLGSIS
LYHCQETTEESLALETRTWNADERGLVKTIADQCAIAIHQAQLHQHVQDLNTNLAQQVEERTAQLQQKMRELERLNSLKD
DFLSTVSHELRTPMSNIKMAIHMLSQFPLEPRQRRYIKILDAECSRETELINDLLDLQRLEAGGNQIKSEPIKIQVWLPR
ALEPFQSRIKDRELNLRVNCDQSIPTFHSDRVSLDRILAELLNNACKYTPQSGEVSLTLQYLEFPKPMLRLQVTNEAEIP
EQELPRIFDKFYRVPNADPWKQGGTGLGLALVQKLIEQLEGEISVSSRQGTTTFIVKLPYKSSLPPAVDAN

Sequences:

>Translated_711_residues
MSNLEQDQRQRFRHLFIIDDAEGRRTISLEAATYSIGRDVTNSIVLHSKMVSRQHAILLRVTAPETSNFLFRIIDGDLQG
KRSTNGLIVNGRRLFSHDLKHGDVVIFGGDVKTKYFVVSNLSDADFDKFCEATDLSMILSQSVNPFQTLVPDDADLQNMS
EASLVRMASFPELTPSPILEMDLQGTVTYLNPAAVMQFPDISKEGVAHPMLQGLLKMVQTEHSSKSNFFVREVEIDQNIY
EQSIHYIVESDLVRSYVTDITERKRAEEKLRHTAQRESIINRIVQAMRGTMVTAEVLQITVGLLTEALGASHCLIVQMNS
DGELADHYVSDTAIGRQDLIQANEMFLRHSQETLAQGQQVVFADTNDLDLELIAICEQCNIQTLLISPLQYLQNYLGSIS
LYHCQETTEESLALETRTWNADERGLVKTIADQCAIAIHQAQLHQHVQDLNTNLAQQVEERTAQLQQKMRELERLNSLKD
DFLSTVSHELRTPMSNIKMAIHMLSQFPLEPRQRRYIKILDAECSRETELINDLLDLQRLEAGGNQIKSEPIKIQVWLPR
ALEPFQSRIKDRELNLRVNCDQSIPTFHSDRVSLDRILAELLNNACKYTPQSGEVSLTLQYLEFPKPMLRLQVTNEAEIP
EQELPRIFDKFYRVPNADPWKQGGTGLGLALVQKLIEQLEGEISVSSRQGTTTFIVKLPYKSSLPPAVDAN
>Mature_710_residues
SNLEQDQRQRFRHLFIIDDAEGRRTISLEAATYSIGRDVTNSIVLHSKMVSRQHAILLRVTAPETSNFLFRIIDGDLQGK
RSTNGLIVNGRRLFSHDLKHGDVVIFGGDVKTKYFVVSNLSDADFDKFCEATDLSMILSQSVNPFQTLVPDDADLQNMSE
ASLVRMASFPELTPSPILEMDLQGTVTYLNPAAVMQFPDISKEGVAHPMLQGLLKMVQTEHSSKSNFFVREVEIDQNIYE
QSIHYIVESDLVRSYVTDITERKRAEEKLRHTAQRESIINRIVQAMRGTMVTAEVLQITVGLLTEALGASHCLIVQMNSD
GELADHYVSDTAIGRQDLIQANEMFLRHSQETLAQGQQVVFADTNDLDLELIAICEQCNIQTLLISPLQYLQNYLGSISL
YHCQETTEESLALETRTWNADERGLVKTIADQCAIAIHQAQLHQHVQDLNTNLAQQVEERTAQLQQKMRELERLNSLKDD
FLSTVSHELRTPMSNIKMAIHMLSQFPLEPRQRRYIKILDAECSRETELINDLLDLQRLEAGGNQIKSEPIKIQVWLPRA
LEPFQSRIKDRELNLRVNCDQSIPTFHSDRVSLDRILAELLNNACKYTPQSGEVSLTLQYLEFPKPMLRLQVTNEAEIPE
QELPRIFDKFYRVPNADPWKQGGTGLGLALVQKLIEQLEGEISVSSRQGTTTFIVKLPYKSSLPPAVDAN

Specific function: Member Of The Two-Component Regulatory System Arcb/Arca. Sensor-Regulator Protein For Anaerobic Repression Of The Arc Modulon. Activates Arca Via A Four-Step Phosphorelay. Arcb Can Also Dephosphorylate Arca By A Reverse Phosphorelay Involving His- 717 And

COG id: COG1716

COG function: function code T; FOG: FHA domain

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=243, Percent_Identity=31.6872427983539, Blast_Score=110, Evalue=4e-25,
Organism=Escherichia coli, GI1789149, Length=261, Percent_Identity=27.9693486590038, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI87081816, Length=274, Percent_Identity=28.1021897810219, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI145693157, Length=258, Percent_Identity=30.2325581395349, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1786783, Length=267, Percent_Identity=26.5917602996255, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1788393, Length=262, Percent_Identity=26.7175572519084, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1788713, Length=232, Percent_Identity=25, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1786600, Length=232, Percent_Identity=26.7241379310345, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1790436, Length=238, Percent_Identity=26.4705882352941, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1790346, Length=281, Percent_Identity=28.1138790035587, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1790861, Length=231, Percent_Identity=26.4069264069264, Blast_Score=76, Evalue=7e-15,
Organism=Escherichia coli, GI87082128, Length=253, Percent_Identity=25.296442687747, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1786912, Length=251, Percent_Identity=27.8884462151394, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1788549, Length=236, Percent_Identity=25.8474576271186, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI1787894, Length=229, Percent_Identity=26.2008733624454, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788279, Length=242, Percent_Identity=24.7933884297521, Blast_Score=63, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR000253
- InterPro:   IPR000014
- InterPro:   IPR008984 [H]

Pfam domain/function: PF00563 EAL; PF00498 FHA; PF00990 GGDEF [H]

EC number: 2.7.3.- [C]

Molecular weight: Translated: 80610; Mature: 80479

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50006 FHA_DOMAIN ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLEQDQRQRFRHLFIIDDAEGRRTISLEAATYSIGRDVTNSIVLHSKMVSRQHAILLR
CCCCCHHHHHHCCEEEEEECCCCCEEEEEEHHHHHHCHHHHHHHHHHHHHHCCCCEEEEE
VTAPETSNFLFRIIDGDLQGKRSTNGLIVNGRRLFSHDLKHGDVVIFGGDVKTKYFVVSN
EECCCCCCCEEEEECCCCCCCCCCCCEEEECHHHHHCCCCCCCEEEECCCCCEEEEEEEC
LSDADFDKFCEATDLSMILSQSVNPFQTLVPDDADLQNMSEASLVRMASFPELTPSPILE
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHCCCHHHHHHHHCCCCCCCCCCEE
MDLQGTVTYLNPAAVMQFPDISKEGVAHPMLQGLLKMVQTEHSSKSNFFVREVEIDQNIY
ECCCCEEEEECHHHHEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHH
EQSIHYIVESDLVRSYVTDITERKRAEEKLRHTAQRESIINRIVQAMRGTMVTAEVLQIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VGLLTEALGASHCLIVQMNSDGELADHYVSDTAIGRQDLIQANEMFLRHSQETLAQGQQV
HHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHCCCEE
VFADTNDLDLELIAICEQCNIQTLLISPLQYLQNYLGSISLYHCQETTEESLALETRTWN
EEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHEEEEECCC
ADERGLVKTIADQCAIAIHQAQLHQHVQDLNTNLAQQVEERTAQLQQKMRELERLNSLKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFLSTVSHELRTPMSNIKMAIHMLSQFPLEPRQRRYIKILDAECSRETELINDLLDLQRL
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH
EAGGNQIKSEPIKIQVWLPRALEPFQSRIKDRELNLRVNCDQSIPTFHSDRVSLDRILAE
HCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
LLNNACKYTPQSGEVSLTLQYLEFPKPMLRLQVTNEAEIPEQELPRIFDKFYRVPNADPW
HHHHHHCCCCCCCCEEEEEEHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCC
KQGGTGLGLALVQKLIEQLEGEISVSSRQGTTTFIVKLPYKSSLPPAVDAN
CCCCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SNLEQDQRQRFRHLFIIDDAEGRRTISLEAATYSIGRDVTNSIVLHSKMVSRQHAILLR
CCCCHHHHHHCCEEEEEECCCCCEEEEEEHHHHHHCHHHHHHHHHHHHHHCCCCEEEEE
VTAPETSNFLFRIIDGDLQGKRSTNGLIVNGRRLFSHDLKHGDVVIFGGDVKTKYFVVSN
EECCCCCCCEEEEECCCCCCCCCCCCEEEECHHHHHCCCCCCCEEEECCCCCEEEEEEEC
LSDADFDKFCEATDLSMILSQSVNPFQTLVPDDADLQNMSEASLVRMASFPELTPSPILE
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHCCCHHHHHHHHCCCCCCCCCCEE
MDLQGTVTYLNPAAVMQFPDISKEGVAHPMLQGLLKMVQTEHSSKSNFFVREVEIDQNIY
ECCCCEEEEECHHHHEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHH
EQSIHYIVESDLVRSYVTDITERKRAEEKLRHTAQRESIINRIVQAMRGTMVTAEVLQIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VGLLTEALGASHCLIVQMNSDGELADHYVSDTAIGRQDLIQANEMFLRHSQETLAQGQQV
HHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHCCCEE
VFADTNDLDLELIAICEQCNIQTLLISPLQYLQNYLGSISLYHCQETTEESLALETRTWN
EEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHEEEEECCC
ADERGLVKTIADQCAIAIHQAQLHQHVQDLNTNLAQQVEERTAQLQQKMRELERLNSLKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFLSTVSHELRTPMSNIKMAIHMLSQFPLEPRQRRYIKILDAECSRETELINDLLDLQRL
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH
EAGGNQIKSEPIKIQVWLPRALEPFQSRIKDRELNLRVNCDQSIPTFHSDRVSLDRILAE
HCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
LLNNACKYTPQSGEVSLTLQYLEFPKPMLRLQVTNEAEIPEQELPRIFDKFYRVPNADPW
HHHHHHCCCCCCCCEEEEEEHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCC
KQGGTGLGLALVQKLIEQLEGEISVSSRQGTTTFIVKLPYKSSLPPAVDAN
CCCCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]