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The map label for this gene is ddpX [H]

Identifier: 158335519

GI number: 158335519

Start: 2369509

End: 2370267

Strand: Reverse

Name: ddpX [H]

Synonym: AM1_2367

Alternate gene names: 158335519

Gene position: 2370267-2369509 (Counterclockwise)

Preceding gene: 158335520

Following gene: 158335510

Centisome position: 36.44

GC content: 49.28

Gene sequence:

>759_bases
ATGCCGATCAGCAAACCTTATTTGCAAATGCCGATTGTTGAATCGGGAGAGACGTTGTTACCCATTCCTCAGGATCTCTT
TGCCTTTGAAACACCTCATCCTTATGAAGTTTTAGGTGCACCCTATGAACAGGCCTCTCCCTATTTCCTCCGGAAGAGCG
TGCTAGCGGCTCTCCAAGCTGCTCAAAACTACTTACAACAGCTTCAGCCTCATTGGCAAATTATGATCTTTGATGCCTAT
CGCCCCATTGCGGTACAGGCTTTTATGGTGAATTTCACCTATGACCAAGTACTCAAAGAGAAAGGCTGGCATGCAGAGAC
CTTATCGTCCAGTCAAACAGAAGCCGCGTGGCAGGAGGTCTATGGATTATGGGCTCCCCCCAATTTGGATCCCAAGTCAC
CTCCTCCGCACAGCACTGGCGCTGCAGTAGATATCACTCTGTTTGATCAACAGACAGATGAGCCTGTGTTTATGGGATCT
GAGATTGATGAATTGTCGGTGCGATCGCATCCCCACTACTTTGCAGATCTGGCCCAAAATCCTCAAACCCCACCCAACGA
AAAACGGCTTGCAGAGCAAGCCGATCAAAACCGTAGAATGATGTGCGATGCCATGAGCCAAGCAGGCTTCCAACGGCATC
AAAACGAATGGTGGCATTTTTGTTTAGGGGATCAGATGTGGGCCTGGCTCAATCAGCTTGAACAGCCTCATCTGATTTTT
AAGGCCCGCTATGGCCGCATCGAGCCGGTCGGATCTTAA

Upstream 100 bases:

>100_bases
CAGCCCTTGGGGATGGTCTGATGGAAGCCTTCAGCACTAAGTTAAGAGATGCCATCACTACCCTACCCTCTGTGTATTCC
CTCTAGTTTGAGTTTTTGGT

Downstream 100 bases:

>100_bases
GCTCGATGCGGCCGGGAATTAGTGGCCAATGCCAACATATTGGAAGCCAGCCTCTTCCAGCATCTTGCGATCCAGGTAAT
TACGACCATCAATGATTACA

Product: D-alanyl-d-alanine dipeptidase

Products: NA

Alternate protein names: D-Ala-D-Ala dipeptidase [H]

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MPISKPYLQMPIVESGETLLPIPQDLFAFETPHPYEVLGAPYEQASPYFLRKSVLAALQAAQNYLQQLQPHWQIMIFDAY
RPIAVQAFMVNFTYDQVLKEKGWHAETLSSSQTEAAWQEVYGLWAPPNLDPKSPPPHSTGAAVDITLFDQQTDEPVFMGS
EIDELSVRSHPHYFADLAQNPQTPPNEKRLAEQADQNRRMMCDAMSQAGFQRHQNEWWHFCLGDQMWAWLNQLEQPHLIF
KARYGRIEPVGS

Sequences:

>Translated_252_residues
MPISKPYLQMPIVESGETLLPIPQDLFAFETPHPYEVLGAPYEQASPYFLRKSVLAALQAAQNYLQQLQPHWQIMIFDAY
RPIAVQAFMVNFTYDQVLKEKGWHAETLSSSQTEAAWQEVYGLWAPPNLDPKSPPPHSTGAAVDITLFDQQTDEPVFMGS
EIDELSVRSHPHYFADLAQNPQTPPNEKRLAEQADQNRRMMCDAMSQAGFQRHQNEWWHFCLGDQMWAWLNQLEQPHLIF
KARYGRIEPVGS
>Mature_251_residues
PISKPYLQMPIVESGETLLPIPQDLFAFETPHPYEVLGAPYEQASPYFLRKSVLAALQAAQNYLQQLQPHWQIMIFDAYR
PIAVQAFMVNFTYDQVLKEKGWHAETLSSSQTEAAWQEVYGLWAPPNLDPKSPPPHSTGAAVDITLFDQQTDEPVFMGSE
IDELSVRSHPHYFADLAQNPQTPPNEKRLAEQADQNRRMMCDAMSQAGFQRHQNEWWHFCLGDQMWAWLNQLEQPHLIFK
ARYGRIEPVGS

Specific function: Hydrolyzes D-Ala-D-Ala. May have a role in cell-wall turnover [H]

COG id: COG2173

COG function: function code M; D-alanyl-D-alanine dipeptidase

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15D family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR000755 [H]

Pfam domain/function: PF01427 Peptidase_M15 [H]

EC number: =3.4.13.22 [H]

Molecular weight: Translated: 28970; Mature: 28839

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISKPYLQMPIVESGETLLPIPQDLFAFETPHPYEVLGAPYEQASPYFLRKSVLAALQA
CCCCCCCEECCEECCCCEEECCCHHHHHCCCCCCHHHHCCCHHHCCHHHHHHHHHHHHHH
AQNYLQQLQPHWQIMIFDAYRPIAVQAFMVNFTYDQVLKEKGWHAETLSSSQTEAAWQEV
HHHHHHHCCCCEEEEEEECCCCEEEEEHEECCCHHHHHHHCCCCHHHHCCCHHHHHHHHH
YGLWAPPNLDPKSPPPHSTGAAVDITLFDQQTDEPVFMGSEIDELSVRSHPHYFADLAQN
HCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCHHHHCCCCHHHHHHHCC
PQTPPNEKRLAEQADQNRRMMCDAMSQAGFQRHQNEWWHFCLGDQMWAWLNQLEQPHLIF
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCEEE
KARYGRIEPVGS
EECCCCCCCCCC
>Mature Secondary Structure 
PISKPYLQMPIVESGETLLPIPQDLFAFETPHPYEVLGAPYEQASPYFLRKSVLAALQA
CCCCCCEECCEECCCCEEECCCHHHHHCCCCCCHHHHCCCHHHCCHHHHHHHHHHHHHH
AQNYLQQLQPHWQIMIFDAYRPIAVQAFMVNFTYDQVLKEKGWHAETLSSSQTEAAWQEV
HHHHHHHCCCCEEEEEEECCCCEEEEEHEECCCHHHHHHHCCCCHHHHCCCHHHHHHHHH
YGLWAPPNLDPKSPPPHSTGAAVDITLFDQQTDEPVFMGSEIDELSVRSHPHYFADLAQN
HCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCHHHHCCCCHHHHHHHCC
PQTPPNEKRLAEQADQNRRMMCDAMSQAGFQRHQNEWWHFCLGDQMWAWLNQLEQPHLIF
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCEEE
KARYGRIEPVGS
EECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9751644 [H]