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The map label for this gene is 158335374

Identifier: 158335374

GI number: 158335374

Start: 2225116

End: 2226420

Strand: Direct

Name: 158335374

Synonym: AM1_2219

Alternate gene names: NA

Gene position: 2225116-2226420 (Clockwise)

Preceding gene: 158335373

Following gene: 158335375

Centisome position: 34.21

GC content: 50.27

Gene sequence:

>1305_bases
ATGGCAGTCAAAACTAAAACAAACATCACCCTCACCGAGCATCAACAGACTGCCCTGGATCAGCTCCACAACTTTCTGGA
TAGTCCCGAACGGCTGTTTGTCCTAGAAGGGTATGCAGGCACGGGCAAGACTACCCTGCTGCAAGCTTTTGTCTCTCAGC
TCAAAGAGCGGGGAGATCGCCGAGATATTGTTTTTAGTGCTTTTACCAACAAAGCCACCAAAGTCCTGCACCAAATGGTG
TCCTCGTGGGGATTGAGCGTCGAATGCCTGACCTGCTGTCAGCTCCTAGGGTTACGCCCGCAGATTAATCCCGAAACAGG
AGAGCAAGAGTTTGTCCTCGATCCCAATGAGGAAAGCTCCTTTGGCAAATTTGCCCTAGTGGTGGTTGACGAATGTTCCA
TGGTCAACCGCAATCTGTGGGAGCTATTGCAAACGGAACTATATGCGTTTCACCTCACCACTCAGCTTTTATTTGTAGGC
GATTCCGCCCAGCTTCCTCCGATTAATGAACCGACTTCCCAAACCTTTGTTGAAATTGCCAACAAAGCCCAGCTGACCGA
AGTCGTGCGTTATGGCAGCTCCATTGGCGTCTTGGCAGAATCCGTCCGCTGCCATTTAGACACCTACAGACTCCCTACCT
TTCAGACCGACCTCAACGAAGATAAAACCGAAGGCACCGTCGTTCTGCGCCAATCCGACTGGACAAAACAACTCCTCCGA
GCCTTTACTAGTGAAAAAGGTCAGGAAGATTCGGATTATGTCCGGGCCTTAGCCTATACCAACAAGCAGGTCGCCAGTCT
CAATCAACAAATTCGCAATGCCATTTTTGGTGCAGAGGCGTGCCGCTTTGTCCCAGGAGAACGGCTGATTGCCATGGGGC
CAGTCTTTCGGCGCAAAGATGAAATTGTGATGCAAACCTCTTCCGAATGCTGGGTGGAAGACGCTTACGAAGACGATTCT
TCTGGCTGGCAGGTCTGGCGACTCTTTGTGGTCACCGATGCCAACTTTGATGTCGAGGTCACGGTTTTGCATGAGTCTGA
ACACCAACGGTTTCAAAAAGAACTCAAGCGCTTAGCAGAAGGTAAGCAATGGCAAGATTTTTGGCTGCTCAAGCAACAGC
GATTTGCCAACTTAAACTATAGCTATGCATTAACCGTGCATAAGTCCCAAGGCTCCACCTTTCAGAATGTCTTCGTTGAC
CTGCCCAACCTCATGCGCAACAGCAATATTCGCGAACGCAACCAGCTACTTTATGTCGCCGTTACCCGAGCCGCCAAACG
GCTGTTTGTTTGCAAAGCCCGCTAA

Upstream 100 bases:

>100_bases
TGGCTACTCGAAGAAGATCGTCCTAGCAGATCAACAGCAATTGACCTCATCCTACAAACCCTTGCTTTAGTATGGTGAAG
ATCGTTTCCACTGCTGACTG

Downstream 100 bases:

>100_bases
TCTATGCCCAGAGAGGATTACAAGGGTTATACGAACCTTTTTTGCAACTGATTTGAAACTTCTACAGAAGTTATACAAGT
ACAACTTGTGGTTGAACACT

Product: DNA helicase

Products: NA

Alternate protein names: DNA Helicase; Helicase; Deoxyribonuclease; ATP-Dependent DNA Helicase Dda; Bacteriophage-Type DNA Helicase; ATP-Dependent ExoDNAse Subunit Alpha; AAA ATPase; ATP-Dependent ExoDNAse; DNA Helicase Related Phage; Exonuclease V Subunit Alpha

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MAVKTKTNITLTEHQQTALDQLHNFLDSPERLFVLEGYAGTGKTTLLQAFVSQLKERGDRRDIVFSAFTNKATKVLHQMV
SSWGLSVECLTCCQLLGLRPQINPETGEQEFVLDPNEESSFGKFALVVVDECSMVNRNLWELLQTELYAFHLTTQLLFVG
DSAQLPPINEPTSQTFVEIANKAQLTEVVRYGSSIGVLAESVRCHLDTYRLPTFQTDLNEDKTEGTVVLRQSDWTKQLLR
AFTSEKGQEDSDYVRALAYTNKQVASLNQQIRNAIFGAEACRFVPGERLIAMGPVFRRKDEIVMQTSSECWVEDAYEDDS
SGWQVWRLFVVTDANFDVEVTVLHESEHQRFQKELKRLAEGKQWQDFWLLKQQRFANLNYSYALTVHKSQGSTFQNVFVD
LPNLMRNSNIRERNQLLYVAVTRAAKRLFVCKAR

Sequences:

>Translated_434_residues
MAVKTKTNITLTEHQQTALDQLHNFLDSPERLFVLEGYAGTGKTTLLQAFVSQLKERGDRRDIVFSAFTNKATKVLHQMV
SSWGLSVECLTCCQLLGLRPQINPETGEQEFVLDPNEESSFGKFALVVVDECSMVNRNLWELLQTELYAFHLTTQLLFVG
DSAQLPPINEPTSQTFVEIANKAQLTEVVRYGSSIGVLAESVRCHLDTYRLPTFQTDLNEDKTEGTVVLRQSDWTKQLLR
AFTSEKGQEDSDYVRALAYTNKQVASLNQQIRNAIFGAEACRFVPGERLIAMGPVFRRKDEIVMQTSSECWVEDAYEDDS
SGWQVWRLFVVTDANFDVEVTVLHESEHQRFQKELKRLAEGKQWQDFWLLKQQRFANLNYSYALTVHKSQGSTFQNVFVD
LPNLMRNSNIRERNQLLYVAVTRAAKRLFVCKAR
>Mature_433_residues
AVKTKTNITLTEHQQTALDQLHNFLDSPERLFVLEGYAGTGKTTLLQAFVSQLKERGDRRDIVFSAFTNKATKVLHQMVS
SWGLSVECLTCCQLLGLRPQINPETGEQEFVLDPNEESSFGKFALVVVDECSMVNRNLWELLQTELYAFHLTTQLLFVGD
SAQLPPINEPTSQTFVEIANKAQLTEVVRYGSSIGVLAESVRCHLDTYRLPTFQTDLNEDKTEGTVVLRQSDWTKQLLRA
FTSEKGQEDSDYVRALAYTNKQVASLNQQIRNAIFGAEACRFVPGERLIAMGPVFRRKDEIVMQTSSECWVEDAYEDDSS
GWQVWRLFVVTDANFDVEVTVLHESEHQRFQKELKRLAEGKQWQDFWLLKQQRFANLNYSYALTVHKSQGSTFQNVFVDL
PNLMRNSNIRERNQLLYVAVTRAAKRLFVCKAR

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49693; Mature: 49562

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKTKTNITLTEHQQTALDQLHNFLDSPERLFVLEGYAGTGKTTLLQAFVSQLKERGDR
CCEEECCCEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCC
RDIVFSAFTNKATKVLHQMVSSWGLSVECLTCCQLLGLRPQINPETGEQEFVLDPNEESS
CEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCC
FGKFALVVVDECSMVNRNLWELLQTELYAFHLTTQLLFVGDSAQLPPINEPTSQTFVEIA
CCCEEEEEEECHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCHHHHHHHH
NKAQLTEVVRYGSSIGVLAESVRCHLDTYRLPTFQTDLNEDKTEGTVVLRQSDWTKQLLR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCEECCCCCCCCCCEEEEECCHHHHHHHH
AFTSEKGQEDSDYVRALAYTNKQVASLNQQIRNAIFGAEACRFVPGERLIAMGPVFRRKD
HHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHCCC
EIVMQTSSECWVEDAYEDDSSGWQVWRLFVVTDANFDVEVTVLHESEHQRFQKELKRLAE
CEEEECCCCCCEECCCCCCCCCEEEEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHC
GKQWQDFWLLKQQRFANLNYSYALTVHKSQGSTFQNVFVDLPNLMRNSNIRERNQLLYVA
CCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHCEEEEE
VTRAAKRLFVCKAR
EHHHHHHHEEEECC
>Mature Secondary Structure 
AVKTKTNITLTEHQQTALDQLHNFLDSPERLFVLEGYAGTGKTTLLQAFVSQLKERGDR
CEEECCCEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCC
RDIVFSAFTNKATKVLHQMVSSWGLSVECLTCCQLLGLRPQINPETGEQEFVLDPNEESS
CEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCC
FGKFALVVVDECSMVNRNLWELLQTELYAFHLTTQLLFVGDSAQLPPINEPTSQTFVEIA
CCCEEEEEEECHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCHHHHHHHH
NKAQLTEVVRYGSSIGVLAESVRCHLDTYRLPTFQTDLNEDKTEGTVVLRQSDWTKQLLR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCEECCCCCCCCCCEEEEECCHHHHHHHH
AFTSEKGQEDSDYVRALAYTNKQVASLNQQIRNAIFGAEACRFVPGERLIAMGPVFRRKD
HHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHCCC
EIVMQTSSECWVEDAYEDDSSGWQVWRLFVVTDANFDVEVTVLHESEHQRFQKELKRLAE
CEEEECCCCCCEECCCCCCCCCEEEEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHC
GKQWQDFWLLKQQRFANLNYSYALTVHKSQGSTFQNVFVDLPNLMRNSNIRERNQLLYVA
CCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHCEEEEE
VTRAAKRLFVCKAR
EHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA