Click here to switch to the map view.

The map label for this gene is wcaC [H]

Identifier: 158335355

GI number: 158335355

Start: 2203877

End: 2205112

Strand: Direct

Name: wcaC [H]

Synonym: AM1_2200

Alternate gene names: 158335355

Gene position: 2203877-2205112 (Clockwise)

Preceding gene: 158335354

Following gene: 158335356

Centisome position: 33.89

GC content: 50.49

Gene sequence:

>1236_bases
ATGAAATCTCTCTTATTGAGTACATCTGACATTGAAGGCGGGGCTGCGAGAGCAGCATACCGACTGCATCAAGGGCTACT
GGCCATTGGCCATGACTCCCAAATGTTAGTTCGCGCCCGTTTCAGTGGCCAGAAGTCGGTCCTGGCTGAAAAGTCAGTAT
TAACTAAATTAGGGCCACCGATGAATGGATGGCCGTTAAAGCTAGGGTCCTATCAAACCAAAACGCTTTTTTCGAGCCAA
TGGTTTCCAGATGCGATCGCAAAAAAAGTCGCCCAGCTCAAGCCTGATATCGTCAATATGCATTGGGTCTGCAATGGCTT
TCTCAAAGTGGAAACCTTGCCCAAACTCAATAAGCCCTTGGTATGGACCCTGCAAGACATGTGGCCGTTTACGGGAGGAT
GCCACTATGCCGAGACCTGCGATGGCTACCAGGATACCTGCGGCAAATGCCCCCAACTCAATAGCCAAAAAGAGACGGAT
CTATCTCGAAAAATTTGGCAGCGTAAACATAAAGCTTGGCAAGACATCAACCTAACCATCGTCACCCCCAGTCAGTGGAT
GGCGGATTGTGTCCGGGAGAGTTCGTTATTTGGCCATCGCCGAGTGGAGGTGATTCCCTTTTGTCTGGATGTGCAAAAGT
ATCGACCCGTCGATAAAGGCTTTAGCCGTGATTTGTTGGGGCTGCCTACAGACAAGCTGATCATTCTGTTTGGTGCTTTA
TCGGCCACTGCTGATTTACGGAAAGGATTTCACCTGCTCCAGCCCGCCCTGCAGAAATTGAGTCAGGCCGGATGGGCAGA
CCGGATTGAGGTGGCCATTTTTGGAGCAGATGCTCCTGCAGAACCCGTCGATTTAGGATTTAAGGCCCATTACCTGGGCA
GCTTTGCCGATGATTTGAGTTTATCCATTGCCTATTCGGCGGCTGATGTCATGATTGTGCCCTCCCTCTACGAATCCTTT
GGTCAAACCGCATCGGAAGGATTGGCCTGTGGCACCCCGGTGGTGGCCTTTAATGCTGCCGGGCAAAAAGATATTGTCAG
CCATCAGGAAACAGGTTATCTGGTCAAACCCTATGAAGTCGATGATTTAGCCCACGGTATGGCCTGGGTCCTGGAAGATG
CCGATCGCCATCACAAATTATGTGAGCAAGCCCGCCAAGCCGCAGTCGATCGGTTTGCCCTAGAGATTCAAGCCCGACAG
TATCGGTCTCTGTTTGAAGAGTTATTGGTAGCTTAA

Upstream 100 bases:

>100_bases
GCTGATGGGTGCAGTTAGGTTGGGAGAATGCTCAGACCCATCGCCTCACCTTTACATCTCTTGCTTGTTCTTATAGGACC
CTAGAAAAACTAAAGCGTCT

Downstream 100 bases:

>100_bases
GCCCTCGAGTCCCTTGAGGGGATAGCGCTTTTGATGGATTAAATGCAAGTGTTTTCGGATCAAAATGACAGAAAAATTGA
TTGAACAAGAAGCACCTAAA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MKSLLLSTSDIEGGAARAAYRLHQGLLAIGHDSQMLVRARFSGQKSVLAEKSVLTKLGPPMNGWPLKLGSYQTKTLFSSQ
WFPDAIAKKVAQLKPDIVNMHWVCNGFLKVETLPKLNKPLVWTLQDMWPFTGGCHYAETCDGYQDTCGKCPQLNSQKETD
LSRKIWQRKHKAWQDINLTIVTPSQWMADCVRESSLFGHRRVEVIPFCLDVQKYRPVDKGFSRDLLGLPTDKLIILFGAL
SATADLRKGFHLLQPALQKLSQAGWADRIEVAIFGADAPAEPVDLGFKAHYLGSFADDLSLSIAYSAADVMIVPSLYESF
GQTASEGLACGTPVVAFNAAGQKDIVSHQETGYLVKPYEVDDLAHGMAWVLEDADRHHKLCEQARQAAVDRFALEIQARQ
YRSLFEELLVA

Sequences:

>Translated_411_residues
MKSLLLSTSDIEGGAARAAYRLHQGLLAIGHDSQMLVRARFSGQKSVLAEKSVLTKLGPPMNGWPLKLGSYQTKTLFSSQ
WFPDAIAKKVAQLKPDIVNMHWVCNGFLKVETLPKLNKPLVWTLQDMWPFTGGCHYAETCDGYQDTCGKCPQLNSQKETD
LSRKIWQRKHKAWQDINLTIVTPSQWMADCVRESSLFGHRRVEVIPFCLDVQKYRPVDKGFSRDLLGLPTDKLIILFGAL
SATADLRKGFHLLQPALQKLSQAGWADRIEVAIFGADAPAEPVDLGFKAHYLGSFADDLSLSIAYSAADVMIVPSLYESF
GQTASEGLACGTPVVAFNAAGQKDIVSHQETGYLVKPYEVDDLAHGMAWVLEDADRHHKLCEQARQAAVDRFALEIQARQ
YRSLFEELLVA
>Mature_411_residues
MKSLLLSTSDIEGGAARAAYRLHQGLLAIGHDSQMLVRARFSGQKSVLAEKSVLTKLGPPMNGWPLKLGSYQTKTLFSSQ
WFPDAIAKKVAQLKPDIVNMHWVCNGFLKVETLPKLNKPLVWTLQDMWPFTGGCHYAETCDGYQDTCGKCPQLNSQKETD
LSRKIWQRKHKAWQDINLTIVTPSQWMADCVRESSLFGHRRVEVIPFCLDVQKYRPVDKGFSRDLLGLPTDKLIILFGAL
SATADLRKGFHLLQPALQKLSQAGWADRIEVAIFGADAPAEPVDLGFKAHYLGSFADDLSLSIAYSAADVMIVPSLYESF
GQTASEGLACGTPVVAFNAAGQKDIVSHQETGYLVKPYEVDDLAHGMAWVLEDADRHHKLCEQARQAAVDRFALEIQARQ
YRSLFEELLVA

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788370, Length=383, Percent_Identity=24.5430809399478, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 45681; Mature: 45681

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLLLSTSDIEGGAARAAYRLHQGLLAIGHDSQMLVRARFSGQKSVLAEKSVLTKLGPP
CCCCEEECCCCCCCHHHHHHHHHHCCEEECCCCCEEEEEHHCCCHHHHHHHHHHHHCCCC
MNGWPLKLGSYQTKTLFSSQWFPDAIAKKVAQLKPDIVNMHWVCNGFLKVETLPKLNKPL
CCCCCEECCCCCHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCCE
VWTLQDMWPFTGGCHYAETCDGYQDTCGKCPQLNSQKETDLSRKIWQRKHKAWQDINLTI
EEEEHHHCCCCCCCCCHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEE
VTPSQWMADCVRESSLFGHRRVEVIPFCLDVQKYRPVDKGFSRDLLGLPTDKLIILFGAL
ECCHHHHHHHHHHHHHCCCCCCEEEHEEHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEHH
SATADLRKGFHLLQPALQKLSQAGWADRIEVAIFGADAPAEPVDLGFKAHYLGSFADDLS
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHHHHCCHHCCCE
LSIAYSAADVMIVPSLYESFGQTASEGLACGTPVVAFNAAGQKDIVSHQETGYLVKPYEV
EEEEECCCCEEEEHHHHHHHCCHHHCCCCCCCCEEEEECCCCHHHHCCCCCCCEECCCCH
DDLAHGMAWVLEDADRHHKLCEQARQAAVDRFALEIQARQYRSLFEELLVA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSLLLSTSDIEGGAARAAYRLHQGLLAIGHDSQMLVRARFSGQKSVLAEKSVLTKLGPP
CCCCEEECCCCCCCHHHHHHHHHHCCEEECCCCCEEEEEHHCCCHHHHHHHHHHHHCCCC
MNGWPLKLGSYQTKTLFSSQWFPDAIAKKVAQLKPDIVNMHWVCNGFLKVETLPKLNKPL
CCCCCEECCCCCHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCCE
VWTLQDMWPFTGGCHYAETCDGYQDTCGKCPQLNSQKETDLSRKIWQRKHKAWQDINLTI
EEEEHHHCCCCCCCCCHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEE
VTPSQWMADCVRESSLFGHRRVEVIPFCLDVQKYRPVDKGFSRDLLGLPTDKLIILFGAL
ECCHHHHHHHHHHHHHCCCCCCEEEHEEHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEHH
SATADLRKGFHLLQPALQKLSQAGWADRIEVAIFGADAPAEPVDLGFKAHYLGSFADDLS
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHHHHCCHHCCCE
LSIAYSAADVMIVPSLYESFGQTASEGLACGTPVVAFNAAGQKDIVSHQETGYLVKPYEV
EEEEECCCCEEEEHHHHHHHCCHHHCCCCCCCCEEEEECCCCHHHHCCCCCCCEECCCCH
DDLAHGMAWVLEDADRHHKLCEQARQAAVDRFALEIQARQYRSLFEELLVA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759852; 9278503 [H]