Click here to switch to the map view.

The map label for this gene is ndhE [H]

Identifier: 158335317

GI number: 158335317

Start: 2156990

End: 2157295

Strand: Direct

Name: ndhE [H]

Synonym: AM1_2161

Alternate gene names: 158335317

Gene position: 2156990-2157295 (Clockwise)

Preceding gene: 158335316

Following gene: 158335318

Centisome position: 33.17

GC content: 45.75

Gene sequence:

>306_bases
ATGAACCTTGAGTTCTTTTTACTCTTAGCGGCTGCCCTATTTTGTATTGGCATCTATGGTCTAGTGACCAGCCGTAACGC
AGTCCGGGTATTAATGTCAGTAGAGCTACTGCTGAATGCCGTTAATTTAAATTTAGTGTCCTTCTCCAACTTCTTGGATG
GCCAAAACATTAATGGTCAGGTATTTACCGTATTTGTCATTACCATTGCGGCCGCCGAAGCGGCGGTTGGCTTGGCGATT
ATCCTCTCCATCTACCGCAACCGTGACACAGTCGATATGGAGCAGTTCAATTTGCTGAAGTGGTAG

Upstream 100 bases:

>100_bases
AAGAGCCAGCGCCAGTACTGGAATTACCAGAGCGTCCCAAAGAGCCTGTTGCTTAGCGCTGAATCCGTTTTTAAGTCTTG
GAGAATTTTAGAGAATCCCT

Downstream 100 bases:

>100_bases
CAGGCCGTCTTATCTTGGAGTCAAGAGTGGCGATCTCACTGCTGAGCTGATTATGCTTGAGATGTAGCGCATCGCAACCT
GCATGAGAGATCAGCTCAAA

Product: NADH dehydrogenase subunit K

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase subunit 4L; NADH-plastoquinone oxidoreductase subunit 4L; NDH-1, subunit 4L; NDH-E [H]

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MNLEFFLLLAAALFCIGIYGLVTSRNAVRVLMSVELLLNAVNLNLVSFSNFLDGQNINGQVFTVFVITIAAAEAAVGLAI
ILSIYRNRDTVDMEQFNLLKW

Sequences:

>Translated_101_residues
MNLEFFLLLAAALFCIGIYGLVTSRNAVRVLMSVELLLNAVNLNLVSFSNFLDGQNINGQVFTVFVITIAAAEAAVGLAI
ILSIYRNRDTVDMEQFNLLKW
>Mature_101_residues
MNLEFFLLLAAALFCIGIYGLVTSRNAVRVLMSVELLLNAVNLNLVSFSNFLDGQNINGQVFTVFVITIAAAEAAVGLAI
ILSIYRNRDTVDMEQFNLLKW

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: COG0713

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)

Gene ontology:
GO:0006810: NAD(P)H-quinone oxidoreductase subunit 4L
GO:0009579: NAD(P)H-quinone oxidoreductase subunit 4L
GO:0016020: NAD(P)H-quinone oxidoreductase subunit 4L
GO:0016021: NAD(P)H-quinone oxidoreductase subunit 4L
GO:0016491: NAD(P)H-quinone oxidoreductase subunit 4L
GO:0016651: NAD(P)H-quinone oxidoreductase subunit 4L
GO:0019684: NAD(P)H-quinone oxidoreductase subunit 4L
GO:0042651: NAD(P)H-quinone oxidoreductase subunit 4L
GO:0042773: NAD(P)H-quinone oxidoreductase subunit 4L
GO:0048038: NAD(P)H-quinone oxidoreductase subunit 4L
GO:0055114: NAD(P)H-quinone oxidoreductase subunit 4L

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 4L family [H]

Homologues:

Organism=Escherichia coli, GI1788615, Length=100, Percent_Identity=36, Blast_Score=64, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001133 [H]

Pfam domain/function: PF00420 Oxidored_q2 [H]

EC number: 1.6.5.3

Molecular weight: Translated: 11171; Mature: 11171

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLEFFLLLAAALFCIGIYGLVTSRNAVRVLMSVELLLNAVNLNLVSFSNFLDGQNINGQ
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCCH
VFTVFVITIAAAEAAVGLAIILSIYRNRDTVDMEQFNLLKW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MNLEFFLLLAAALFCIGIYGLVTSRNAVRVLMSVELLLNAVNLNLVSFSNFLDGQNINGQ
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCCH
VFTVFVITIAAAEAAVGLAIILSIYRNRDTVDMEQFNLLKW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA