| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is mbaA [H]
Identifier: 158335246
GI number: 158335246
Start: 2080963
End: 2082987
Strand: Direct
Name: mbaA [H]
Synonym: AM1_2089
Alternate gene names: 158335246
Gene position: 2080963-2082987 (Clockwise)
Preceding gene: 158335245
Following gene: 158335249
Centisome position: 32.0
GC content: 45.58
Gene sequence:
>2025_bases ATGTATCTGAATCGACTTATTCACTTTAAGACCCTGTTGCTATTACGAGAAGCATTTACTTCGCTCTTACCCGTCGTCTT AGTGATGAATATTGTTGTCTTACTGTCAGGTTTATCTGACGTGCTGGCATCTCAGGGTGTCGTAGCAGAGGGTTTTATCA ACGGAAATGAAGTTAGTCGACTCTACTTCTTTCTAGTCCCGTTTTTTCTCAACATTTCTCTGAGCACTTTGATGGCCAAG GAGAAAGAGCTTGATCAGGTCAGTACGATTCTGATTTCAGCCGTTTGCTTTTTGCGCGTATCGGGCTTCTTATTCATTAA TTCAACCGGCCAAATCCTCTCTTTTCAGGGCTCCGTGATCACCAGTATCCCAGCCACACTGGTGGCGGTCACGCTGCTCC ATTATTTCAGTCGATTCTCGTCTCTACAATTTTTTCGAGGTCGATCTGAGGTGAGCCCAGTCCTCCAAAGAACGCTAAAC CTCCTGATTCCAGGGCTCTTGACAATGTTATGTTGTGAGTTGGTCGGTCATGGATTTCGGCTATTTTTTAAGGCCGGTGT TTTTAGCGTTTTATTCGCAGCCCTACCTAAGCTTCAGGACATTCAAGAAGTCATTCTCTTTAAACTGATTTCTCAACTCT CCTGGTTCTTCGGAATTCATGGCGAGTACAGTGCCGATGGTTTATTTCGAATTTTAAATGAGATTCCATCTTCCCAAGCG GGCAGTATTCACTTCAAAGTCTTACATGATGTATTTATGAATATTGGAGGCTCTGGCTCTACGTTTGTGGTGCCATTAGC AATTCTTTCCCTGCCTGGCTCTGCTCCATTTAAATCCATCGCTCAGCTGAGTCTGCCGTTTGCCCTCTTCAATGTCAACG AAATTTTATTGTTCGGGCTGCCGATTATCCTCAATCCACTCTTTTTGGCACCGTTTTTATTAGCCCCCCTCATTAATCTG GCCATTGCTCTGACTGCAATTCATCTAGGGGTATTCACTCTCAGTGCCCCTGCCATCAACTGGATGTCTCCTCCCTTATA TAGTGCCTATGCAGCCTCTGGAGGCTCGGGAGGGGCCGTACTGACCCAGTTACTTTGTATCGTGATCGATATGAGTATCT ACTATCCATTTCTGATTCTGGCTCAGCAACAATCCAATACTCCGCTGAATCTAAGCAAACGCTTGCATAGTGATGCTTAC CAATTTGTTAATACAGAACTCAATCGTCAGGAAGAGCGACGCTTTATCACTCAGAAAATGGATCAAGTCAGAGGAATGGA AGAGGCCCAGCGCCTGCTACAGCAACTCAAAGGTGGGCAGTTTATTCTTTACTTTCAGCCTAAGGTAGATGCCAAATCGA AAGCACTCGTGGGCTTAGAAACATTGCTCCGTTTTCAAGATGCAGGGGGTAAAATTGTCCCTCCTACTTTTTTGCCTATC CTCTACCAGCAAGGGCTATCTAAGGCCGTGGATCAAAAAGTGCTGTCGCTGGTTTTTGACCAGATCAAACAGTGGCGAGG GGATGGTCAACGATTCCCTCAGATTAGTATTAACCTAGATAAAAATTTTTTATTAGATCCACCCTCGGTACAGGCTCTTA TCGCTCAAGCCAGACAAGAAGATATTTGCTTTGAACTAGAAATCACTGAGCATACCTACACTTCGGAAGTGCAATCTTTA GCATCAGTGGTGCGGGACCTTCGAGCGGCAGGACATCAAATTGCAATAGATGATTTTGGAGCAGGCTATTCTTCCCTCAC CACTCTAGTGTCTCTGGAAGCAGATTCGGTCAAATTAGACCGAAACCTCGTCGCCGCGCCTGAGGGGGAAAGCCAGCGGG GACGTGTGTTACTGGAATCTAGTGTAAAGCTCTGTCATGACTTAGGATTTGCTGTGGTGGCAGAAGGGATTGAAAGCTCA GCCCAGTTAAAGTTAGTGCAGCACTGTGAGGTAGATTTTGTGCAAGGGTATTACACGGGCAAACCCATGCCCTCAAATCA GGTCAGTCGCTTATTTCATGCCTAA
Upstream 100 bases:
>100_bases GGCTCTTGAGGTCAAAATGGTCGGCATCCAGCCATTTAGAGCGGCTTTAACCTAGCCAAATCCCACTCCAGCAAGTGTTT CCCTGTGTTTGTGTTCATCC
Downstream 100 bases:
>100_bases TCGAACGTATTAGCCTGCCCCCAAATCAGCTAGCCATTTCCATCAGATGAAACTGCGTTGGAATTCAGGTTGAAGTAACA TCAACTTCAGATCCAGCTGT
Product: phosphotransferase system, lactose/cellobiose IIC component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 674; Mature: 674
Protein sequence:
>674_residues MYLNRLIHFKTLLLLREAFTSLLPVVLVMNIVVLLSGLSDVLASQGVVAEGFINGNEVSRLYFFLVPFFLNISLSTLMAK EKELDQVSTILISAVCFLRVSGFLFINSTGQILSFQGSVITSIPATLVAVTLLHYFSRFSSLQFFRGRSEVSPVLQRTLN LLIPGLLTMLCCELVGHGFRLFFKAGVFSVLFAALPKLQDIQEVILFKLISQLSWFFGIHGEYSADGLFRILNEIPSSQA GSIHFKVLHDVFMNIGGSGSTFVVPLAILSLPGSAPFKSIAQLSLPFALFNVNEILLFGLPIILNPLFLAPFLLAPLINL AIALTAIHLGVFTLSAPAINWMSPPLYSAYAASGGSGGAVLTQLLCIVIDMSIYYPFLILAQQQSNTPLNLSKRLHSDAY QFVNTELNRQEERRFITQKMDQVRGMEEAQRLLQQLKGGQFILYFQPKVDAKSKALVGLETLLRFQDAGGKIVPPTFLPI LYQQGLSKAVDQKVLSLVFDQIKQWRGDGQRFPQISINLDKNFLLDPPSVQALIAQARQEDICFELEITEHTYTSEVQSL ASVVRDLRAAGHQIAIDDFGAGYSSLTTLVSLEADSVKLDRNLVAAPEGESQRGRVLLESSVKLCHDLGFAVVAEGIESS AQLKLVQHCEVDFVQGYYTGKPMPSNQVSRLFHA
Sequences:
>Translated_674_residues MYLNRLIHFKTLLLLREAFTSLLPVVLVMNIVVLLSGLSDVLASQGVVAEGFINGNEVSRLYFFLVPFFLNISLSTLMAK EKELDQVSTILISAVCFLRVSGFLFINSTGQILSFQGSVITSIPATLVAVTLLHYFSRFSSLQFFRGRSEVSPVLQRTLN LLIPGLLTMLCCELVGHGFRLFFKAGVFSVLFAALPKLQDIQEVILFKLISQLSWFFGIHGEYSADGLFRILNEIPSSQA GSIHFKVLHDVFMNIGGSGSTFVVPLAILSLPGSAPFKSIAQLSLPFALFNVNEILLFGLPIILNPLFLAPFLLAPLINL AIALTAIHLGVFTLSAPAINWMSPPLYSAYAASGGSGGAVLTQLLCIVIDMSIYYPFLILAQQQSNTPLNLSKRLHSDAY QFVNTELNRQEERRFITQKMDQVRGMEEAQRLLQQLKGGQFILYFQPKVDAKSKALVGLETLLRFQDAGGKIVPPTFLPI LYQQGLSKAVDQKVLSLVFDQIKQWRGDGQRFPQISINLDKNFLLDPPSVQALIAQARQEDICFELEITEHTYTSEVQSL ASVVRDLRAAGHQIAIDDFGAGYSSLTTLVSLEADSVKLDRNLVAAPEGESQRGRVLLESSVKLCHDLGFAVVAEGIESS AQLKLVQHCEVDFVQGYYTGKPMPSNQVSRLFHA >Mature_674_residues MYLNRLIHFKTLLLLREAFTSLLPVVLVMNIVVLLSGLSDVLASQGVVAEGFINGNEVSRLYFFLVPFFLNISLSTLMAK EKELDQVSTILISAVCFLRVSGFLFINSTGQILSFQGSVITSIPATLVAVTLLHYFSRFSSLQFFRGRSEVSPVLQRTLN LLIPGLLTMLCCELVGHGFRLFFKAGVFSVLFAALPKLQDIQEVILFKLISQLSWFFGIHGEYSADGLFRILNEIPSSQA GSIHFKVLHDVFMNIGGSGSTFVVPLAILSLPGSAPFKSIAQLSLPFALFNVNEILLFGLPIILNPLFLAPFLLAPLINL AIALTAIHLGVFTLSAPAINWMSPPLYSAYAASGGSGGAVLTQLLCIVIDMSIYYPFLILAQQQSNTPLNLSKRLHSDAY QFVNTELNRQEERRFITQKMDQVRGMEEAQRLLQQLKGGQFILYFQPKVDAKSKALVGLETLLRFQDAGGKIVPPTFLPI LYQQGLSKAVDQKVLSLVFDQIKQWRGDGQRFPQISINLDKNFLLDPPSVQALIAQARQEDICFELEITEHTYTSEVQSL ASVVRDLRAAGHQIAIDDFGAGYSSLTTLVSLEADSVKLDRNLVAAPEGESQRGRVLLESSVKLCHDLGFAVVAEGIESS AQLKLVQHCEVDFVQGYYTGKPMPSNQVSRLFHA
Specific function: Plays an essential role in the maintenance and the formation of the three-dimensional structure of the biofilms at the later stages of their development. Absence of mbaA promotes the accumulation of larger amount of biomass on the surfaces at later stage
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass type I membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HAMP domain [H]
Homologues:
Organism=Escherichia coli, GI1790496, Length=244, Percent_Identity=29.9180327868852, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI87081845, Length=239, Percent_Identity=29.7071129707113, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI87081743, Length=247, Percent_Identity=29.9595141700405, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI87081921, Length=243, Percent_Identity=28.8065843621399, Blast_Score=106, Evalue=5e-24, Organism=Escherichia coli, GI1788032, Length=353, Percent_Identity=26.9121813031161, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI226510982, Length=259, Percent_Identity=30.5019305019305, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1787541, Length=250, Percent_Identity=28.4, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI1788502, Length=249, Percent_Identity=28.1124497991968, Blast_Score=96, Evalue=9e-21, Organism=Escherichia coli, GI1788849, Length=290, Percent_Identity=28.9655172413793, Blast_Score=94, Evalue=4e-20, Organism=Escherichia coli, GI87082096, Length=254, Percent_Identity=29.9212598425197, Blast_Score=92, Evalue=2e-19, Organism=Escherichia coli, GI87081980, Length=229, Percent_Identity=29.2576419213974, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI1786507, Length=239, Percent_Identity=25.9414225941423, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1787055, Length=262, Percent_Identity=26.7175572519084, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR001633 - InterPro: IPR003660 [H]
Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF00672 HAMP [H]
EC number: NA
Molecular weight: Translated: 74346; Mature: 74346
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: PS51105 PTS_EIIC_TYPE_3 ; PS50883 EAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLNRLIHFKTLLLLREAFTSLLPVVLVMNIVVLLSGLSDVLASQGVVAEGFINGNEVSR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHH LYFFLVPFFLNISLSTLMAKEKELDQVSTILISAVCFLRVSGFLFINSTGQILSFQGSVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEECCCHH TSIPATLVAVTLLHYFSRFSSLQFFRGRSEVSPVLQRTLNLLIPGLLTMLCCELVGHGFR HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LFFKAGVFSVLFAALPKLQDIQEVILFKLISQLSWFFGIHGEYSADGLFRILNEIPSSQA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC GSIHFKVLHDVFMNIGGSGSTFVVPLAILSLPGSAPFKSIAQLSLPFALFNVNEILLFGL CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHCC PIILNPLFLAPFLLAPLINLAIALTAIHLGVFTLSAPAINWMSPPLYSAYAASGGSGGAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHH LTQLLCIVIDMSIYYPFLILAQQQSNTPLNLSKRLHSDAYQFVNTELNRQEERRFITQKM HHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH DQVRGMEEAQRLLQQLKGGQFILYFQPKVDAKSKALVGLETLLRFQDAGGKIVPPTFLPI HHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH LYQQGLSKAVDQKVLSLVFDQIKQWRGDGQRFPQISINLDKNFLLDPPSVQALIAQARQE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC DICFELEITEHTYTSEVQSLASVVRDLRAAGHQIAIDDFGAGYSSLTTLVSLEADSVKLD CCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCEEEC RNLVAAPEGESQRGRVLLESSVKLCHDLGFAVVAEGIESSAQLKLVQHCEVDFVQGYYTG CCEEECCCCCCCCCCEEHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCHHHHCCEECC KPMPSNQVSRLFHA CCCCHHHHHHHHCC >Mature Secondary Structure MYLNRLIHFKTLLLLREAFTSLLPVVLVMNIVVLLSGLSDVLASQGVVAEGFINGNEVSR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHH LYFFLVPFFLNISLSTLMAKEKELDQVSTILISAVCFLRVSGFLFINSTGQILSFQGSVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEECCCHH TSIPATLVAVTLLHYFSRFSSLQFFRGRSEVSPVLQRTLNLLIPGLLTMLCCELVGHGFR HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LFFKAGVFSVLFAALPKLQDIQEVILFKLISQLSWFFGIHGEYSADGLFRILNEIPSSQA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC GSIHFKVLHDVFMNIGGSGSTFVVPLAILSLPGSAPFKSIAQLSLPFALFNVNEILLFGL CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHCC PIILNPLFLAPFLLAPLINLAIALTAIHLGVFTLSAPAINWMSPPLYSAYAASGGSGGAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHH LTQLLCIVIDMSIYYPFLILAQQQSNTPLNLSKRLHSDAYQFVNTELNRQEERRFITQKM HHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH DQVRGMEEAQRLLQQLKGGQFILYFQPKVDAKSKALVGLETLLRFQDAGGKIVPPTFLPI HHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH LYQQGLSKAVDQKVLSLVFDQIKQWRGDGQRFPQISINLDKNFLLDPPSVQALIAQARQE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC DICFELEITEHTYTSEVQSLASVVRDLRAAGHQIAIDDFGAGYSSLTTLVSLEADSVKLD CCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCEEEC RNLVAAPEGESQRGRVLLESSVKLCHDLGFAVVAEGIESSAQLKLVQHCEVDFVQGYYTG CCEEECCCCCCCCCCEEHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCHHHHCCEECC KPMPSNQVSRLFHA CCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]