Click here to switch to the map view.

The map label for this gene is yccA [C]

Identifier: 158335170

GI number: 158335170

Start: 2001430

End: 2002149

Strand: Direct

Name: yccA [C]

Synonym: AM1_2013

Alternate gene names: 158335170

Gene position: 2001430-2002149 (Clockwise)

Preceding gene: 158335166

Following gene: 158335173

Centisome position: 30.77

GC content: 47.22

Gene sequence:

>720_bases
TTGATACTGCCTTTGTCGAGGATACAAATTATGTTAAGCGTTGCCCAGTCAAGGCCATCTGAACGCGCCATTTTTATTCA
GAAAACCTATCTGCATCTTGCAGGGGCCATTGGTGCGTTTATTGTCGTCGAATTTCTACTGTTCCAATTGGGGATTGCTG
AAGCAATGTTCCAATTTGTAGCCGGAGGTCGTTTTAGCTGGCTGTTAATTTTAGGTGCATTCTCACTCCTCGGCTGGATG
TCTCGGGGACTGGTTGCCAAAGCGGATCAAGTGGGTACTCAGTACGCAGGGCTAGGGGTTTATGTAGTTGCCCAAGCCTT
GATTTTTGCCCCCATGCTTTACATGGCTGCGGCTTTTTCAGACGCTAATGTCATTCCCACAGCAGGTATCTTAACCCTGA
CTATGTTTGGGGGACTGACTGCGATCGCTTTCACTACCCGAACAGATTTCACCTTTCTCGGTGGCATCCTTAAAATTGGT
AGCTTTGTCGCTCTGGGACTGATCGTTTGCAGTTACATCTTCGGCTTTTCCCTTGGATTATTCTTCTCCGTTGTGATGGT
CGTGTTTGCCTCAGCAGCGATTTTATACGACACCTCTAAGGTGATGAAGCACTATTCCACCAGACATTATGTTGCGGCAT
CCCTAGAATTGTTCGCGTCTGTGGCTTTGCTATTCTGGTACATCCTTCGCATCGTGATGTCCATGTCATCTCGCCAATAA

Upstream 100 bases:

>100_bases
ACCTGAAACCTTTGGGTAGCGAGGTGTTCGGTTAGGGACCCATATGGGCGTGGAGACAGTTGATTTGTTCGTAGACTAAG
CTAGACCTATAGCAGGTTTT

Downstream 100 bases:

>100_bases
CCCCACTCCTCTGACATATCAGCATCATCGGTACAAGGTTGAACGTACGGATGATGCTGATATGTCAGAGGTATTAAAGA
TCTTTGTGGGTAAACGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MILPLSRIQIMLSVAQSRPSERAIFIQKTYLHLAGAIGAFIVVEFLLFQLGIAEAMFQFVAGGRFSWLLILGAFSLLGWM
SRGLVAKADQVGTQYAGLGVYVVAQALIFAPMLYMAAAFSDANVIPTAGILTLTMFGGLTAIAFTTRTDFTFLGGILKIG
SFVALGLIVCSYIFGFSLGLFFSVVMVVFASAAILYDTSKVMKHYSTRHYVAASLELFASVALLFWYILRIVMSMSSRQ

Sequences:

>Translated_239_residues
MILPLSRIQIMLSVAQSRPSERAIFIQKTYLHLAGAIGAFIVVEFLLFQLGIAEAMFQFVAGGRFSWLLILGAFSLLGWM
SRGLVAKADQVGTQYAGLGVYVVAQALIFAPMLYMAAAFSDANVIPTAGILTLTMFGGLTAIAFTTRTDFTFLGGILKIG
SFVALGLIVCSYIFGFSLGLFFSVVMVVFASAAILYDTSKVMKHYSTRHYVAASLELFASVALLFWYILRIVMSMSSRQ
>Mature_239_residues
MILPLSRIQIMLSVAQSRPSERAIFIQKTYLHLAGAIGAFIVVEFLLFQLGIAEAMFQFVAGGRFSWLLILGAFSLLGWM
SRGLVAKADQVGTQYAGLGVYVVAQALIFAPMLYMAAAFSDANVIPTAGILTLTMFGGLTAIAFTTRTDFTFLGGILKIG
SFVALGLIVCSYIFGFSLGLFFSVVMVVFASAAILYDTSKVMKHYSTRHYVAASLELFASVALLFWYILRIVMSMSSRQ

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26015; Mature: 26015

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILPLSRIQIMLSVAQSRPSERAIFIQKTYLHLAGAIGAFIVVEFLLFQLGIAEAMFQFV
CCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGGRFSWLLILGAFSLLGWMSRGLVAKADQVGTQYAGLGVYVVAQALIFAPMLYMAAAFS
HCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DANVIPTAGILTLTMFGGLTAIAFTTRTDFTFLGGILKIGSFVALGLIVCSYIFGFSLGL
CCCCCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFSVVMVVFASAAILYDTSKVMKHYSTRHYVAASLELFASVALLFWYILRIVMSMSSRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MILPLSRIQIMLSVAQSRPSERAIFIQKTYLHLAGAIGAFIVVEFLLFQLGIAEAMFQFV
CCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGGRFSWLLILGAFSLLGWMSRGLVAKADQVGTQYAGLGVYVVAQALIFAPMLYMAAAFS
HCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DANVIPTAGILTLTMFGGLTAIAFTTRTDFTFLGGILKIGSFVALGLIVCSYIFGFSLGL
CCCCCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFSVVMVVFASAAILYDTSKVMKHYSTRHYVAASLELFASVALLFWYILRIVMSMSSRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA